RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 KIF21BO75037 1637 aa16.52■□□□□ 0.23
PSEN1-215ENST00000556011 ADAMTSL3P82987 1691 aa16.48■□□□□ 0.23
PSEN1-215ENST00000556011 ADCY10Q96PN6 1610 aa16.42■□□□□ 0.22
PSEN1-215ENST00000556011 RAD54L2Q9Y4B4 1467 aa16.4■□□□□ 0.22
PSEN1-215ENST00000556011 PRDM2Q13029 1718 aa16.39■□□□□ 0.21
PSEN1-215ENST00000556011 SHROOM2Q13796 1616 aa16.39■□□□□ 0.21
PSEN1-215ENST00000556011 ABCC8Q09428 1581 aa16.38■□□□□ 0.21
PSEN1-215ENST00000556011 IQSEC2Q5JU85 1478 aa16.37■□□□□ 0.21
PSEN1-215ENST00000556011 DNMBPQ6XZF7 1577 aa16.37■□□□□ 0.21
PSEN1-215ENST00000556011 UBAP1LF5GYI3 381 aa16.35■□□□□ 0.21
PSEN1-215ENST00000556011 HSPA1LP34931 641 aa16.35■□□□□ 0.21
PSEN1-215ENST00000556011 POLA1P09884 1462 aaPredicted RBP16.35■□□□□ 0.21
PSEN1-215ENST00000556011 GRIN2BQ13224 1484 aa16.33■□□□□ 0.2
PSEN1-215ENST00000556011 LTBP4Q8N2S1 1624 aa16.33■□□□□ 0.2
PSEN1-215ENST00000556011 MADDQ8WXG6 1647 aa16.31■□□□□ 0.2
PSEN1-215ENST00000556011 STRCQ7RTU9 1775 aa16.29■□□□□ 0.2
PSEN1-215ENST00000556011 RGS17Q9UGC6 210 aaPredicted RBP16.29■□□□□ 0.2
PSEN1-215ENST00000556011 DMRT2Q9Y5R5 561 aa16.28■□□□□ 0.2
PSEN1-215ENST00000556011 GLI2P10070 1586 aa16.28■□□□□ 0.2
PSEN1-215ENST00000556011 PLPPR3Q6T4P5 718 aa16.26■□□□□ 0.19
PSEN1-215ENST00000556011 PRG4Q92954 1404 aaPredicted RBP16.25■□□□□ 0.19
PSEN1-215ENST00000556011 SETD1AO15047 1707 aaKnown RBP16.25■□□□□ 0.19
PSEN1-215ENST00000556011 WDR97A6NE52 1622 aa16.24■□□□□ 0.19
PSEN1-215ENST00000556011 PTPRTO14522 1441 aa16.24■□□□□ 0.19
PSEN1-215ENST00000556011 SOGA1O94964 1423 aa16.23■□□□□ 0.19
PSEN1-215ENST00000556011 YEATS2Q9ULM3 1422 aa16.22■□□□□ 0.19
PSEN1-215ENST00000556011 TEX14Q8IWB6 1497 aa16.21■□□□□ 0.19
PSEN1-215ENST00000556011 RIMS1Q86UR5 1692 aaKnown RBP16.21■□□□□ 0.18
PSEN1-215ENST00000556011 BCORL1Q5H9F3 1711 aa16.18■□□□□ 0.18
PSEN1-215ENST00000556011 PBRM1Q86U86 1689 aa16.18■□□□□ 0.18
PSEN1-215ENST00000556011 MAP3K4Q9Y6R4 1608 aa16.16■□□□□ 0.18
PSEN1-215ENST00000556011 NUP160Q12769 1436 aa16.15■□□□□ 0.18
PSEN1-215ENST00000556011 GRIN2AQ12879 1464 aa16.14■□□□□ 0.17
PSEN1-215ENST00000556011 SCAF1Q9H7N4 1312 aaKnown RBP16.13■□□□□ 0.17
PSEN1-215ENST00000556011 WIZO95785 1651 aa16.11■□□□□ 0.17
PSEN1-215ENST00000556011 POTEAQ6S8J7 498 aa16.1■□□□□ 0.17
PSEN1-215ENST00000556011 UPF1Q92900 1129 aaKnown RBP eCLIP16.1■□□□□ 0.17
PSEN1-215ENST00000556011 ASXL2Q76L83 1435 aa16.1■□□□□ 0.17
PSEN1-215ENST00000556011 CFAP43Q8NDM7 1665 aa16.08■□□□□ 0.17
PSEN1-215ENST00000556011 PIP4K2BP78356 416 aa16.06■□□□□ 0.16
PSEN1-215ENST00000556011 PLB1Q6P1J6 1458 aa16.05■□□□□ 0.16
PSEN1-215ENST00000556011 JPH4Q96JJ6 628 aa16.03■□□□□ 0.16
PSEN1-215ENST00000556011 KIAA0586Q9BVV6 1533 aa16.02■□□□□ 0.15
PSEN1-215ENST00000556011 ARID4BQ4LE39 1312 aaPredicted RBP16.01■□□□□ 0.15
PSEN1-215ENST00000556011 EPRSP07814 1512 aaKnown RBP15.98■□□□□ 0.15
PSEN1-215ENST00000556011 PREX1Q8TCU6 1659 aa15.96■□□□□ 0.15
PSEN1-215ENST00000556011 RBM33Q96EV2 1170 aaKnown RBP15.91■□□□□ 0.14
PSEN1-215ENST00000556011 FGD5Q6ZNL6 1462 aa15.91■□□□□ 0.14
PSEN1-215ENST00000556011 CUL7Q14999 1698 aa15.89■□□□□ 0.13
PSEN1-215ENST00000556011 SENP3Q9H4L4 574 aaPredicted RBP15.88■□□□□ 0.13
PSEN1-215ENST00000556011 ABCC2Q92887 1545 aa15.87■□□□□ 0.13
PSEN1-215ENST00000556011 ZNF335Q9H4Z2 1342 aaPredicted RBP15.86■□□□□ 0.13
PSEN1-215ENST00000556011 ADAMTS12P58397 1594 aa15.83■□□□□ 0.12
PSEN1-215ENST00000556011 SLC34A2O95436 690 aa15.82■□□□□ 0.12
PSEN1-215ENST00000556011 TOM1O60784 492 aa15.79■□□□□ 0.12
PSEN1-215ENST00000556011 ABCA5Q8WWZ7 1642 aa15.77■□□□□ 0.12
PSEN1-215ENST00000556011 SETBP1Q9Y6X0 1596 aa15.77■□□□□ 0.11
PSEN1-215ENST00000556011 MAGI3Q5TCQ9 1506 aa15.74■□□□□ 0.11
PSEN1-215ENST00000556011 TTBK1Q5TCY1 1321 aaPredicted RBP15.74■□□□□ 0.11
PSEN1-215ENST00000556011 SENP3-EIF4A1A0A087X0R7 540 aa15.72■□□□□ 0.11
PSEN1-215ENST00000556011 TTC37Q6PGP7 1564 aa15.71■□□□□ 0.11
PSEN1-215ENST00000556011 ARAP3Q8WWN8 1544 aa15.71■□□□□ 0.11
PSEN1-215ENST00000556011 UHRF1BP1Q6BDS2 1440 aa15.7■□□□□ 0.1
PSEN1-215ENST00000556011 CD109Q6YHK3 1445 aa15.7■□□□□ 0.1
PSEN1-215ENST00000556011 FER1L4A9Z1Z3 1794 aa15.7■□□□□ 0.1
PSEN1-215ENST00000556011 CEBPAP49715 358 aaPredicted RBP15.68■□□□□ 0.1
PSEN1-215ENST00000556011 CEP350Q5VT06 3117 aa15.68■□□□□ 0.1
PSEN1-215ENST00000556011 RUSC2Q8N2Y8 1516 aa15.67■□□□□ 0.1
PSEN1-215ENST00000556011 YY1P25490 414 aa15.65■□□□□ 0.1
PSEN1-215ENST00000556011 ZRANB1Q9UGI0 708 aa15.65■□□□□ 0.1
PSEN1-215ENST00000556011 PTPRGP23470 1445 aa15.65■□□□□ 0.1
PSEN1-215ENST00000556011 SETD1BQ9UPS6 1966 aaKnown RBP15.64■□□□□ 0.09
PSEN1-215ENST00000556011 FHAD1B1AJZ9 1412 aa15.64■□□□□ 0.09
PSEN1-215ENST00000556011 RAPGEF3O95398 923 aa15.64■□□□□ 0.09
PSEN1-215ENST00000556011 KIAA0556O60303 1618 aa15.64■□□□□ 0.09
PSEN1-215ENST00000556011 TOP2AP11388 1531 aaKnown RBP15.63■□□□□ 0.09
PSEN1-215ENST00000556011 PCDH10Q9P2E7 1040 aa15.63■□□□□ 0.09
PSEN1-215ENST00000556011 NCOA1Q15788 1441 aa15.62■□□□□ 0.09
PSEN1-215ENST00000556011 TRIM52Q96A61 297 aa15.62■□□□□ 0.09
PSEN1-215ENST00000556011 ALKQ9UM73 1620 aa15.61■□□□□ 0.09
PSEN1-215ENST00000556011 MLECQ14165 292 aa15.61■□□□□ 0.09
PSEN1-215ENST00000556011 SIGLEC1Q9BZZ2 1709 aa15.57■□□□□ 0.08
PSEN1-215ENST00000556011 POGZQ7Z3K3 1410 aa15.57■□□□□ 0.08
PSEN1-215ENST00000556011 ZCCHC11Q5TAX3 1644 aaKnown RBP15.54■□□□□ 0.08
PSEN1-215ENST00000556011 CCDC88BA6NC98 1476 aa15.54■□□□□ 0.08
PSEN1-215ENST00000556011 ABCA10Q8WWZ4 1543 aa15.53■□□□□ 0.08
PSEN1-215ENST00000556011 CUX1P39880 1505 aa15.53■□□□□ 0.08
PSEN1-215ENST00000556011 UHRF1BP1LA0JNW5 1464 aa15.52■□□□□ 0.08
PSEN1-215ENST00000556011 KDM5BQ9UGL1 1544 aa15.52■□□□□ 0.07
PSEN1-215ENST00000556011 NCKAP5LQ9HCH0 1330 aa15.51■□□□□ 0.07
PSEN1-215ENST00000556011 WDR7Q9Y4E6 1490 aa15.51■□□□□ 0.07
PSEN1-215ENST00000556011 ARHGEF40Q8TER5 1519 aa15.5■□□□□ 0.07
PSEN1-215ENST00000556011 FANCAO15360 1455 aa15.5■□□□□ 0.07
PSEN1-215ENST00000556011 FRMPD1Q5SYB0 1578 aa15.49■□□□□ 0.07
PSEN1-215ENST00000556011 PTPRKQ15262 1439 aa15.48■□□□□ 0.07
PSEN1-215ENST00000556011 KCNH8Q96L42 1107 aa15.47■□□□□ 0.07
PSEN1-215ENST00000556011 FOXD1Q16676 465 aa15.45■□□□□ 0.06
PSEN1-215ENST00000556011 CAMSAP1Q5T5Y3 1602 aa15.45■□□□□ 0.06
PSEN1-215ENST00000556011 UACAQ9BZF9 1416 aa15.43■□□□□ 0.06
PSEN1-215ENST00000556011 LRP5O75197 1615 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms