RNA–Protein interactions for RNA: ENST00000555332.5

LINC01197-202, Transcript of long intergenic non-protein coding RNA 1197, humanhuman

TSL 3 BASIC

Gene LINC01197, Length 3,568 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01197-202ENST00000555332 SPOCK2Q92563 424 aa7.49□□□□□ -1.21
LINC01197-202ENST00000555332 C1orf115Q9H7X2 142 aa7.48□□□□□ -1.21
LINC01197-202ENST00000555332 ZMYND15Q9H091 742 aa7.48□□□□□ -1.21
LINC01197-202ENST00000555332 ZBTB7CA1YPR0 619 aa7.47□□□□□ -1.21
LINC01197-202ENST00000555332 LMOD2Q6P5Q4 547 aa7.47□□□□□ -1.21
LINC01197-202ENST00000555332 NECTIN2Q92692 538 aa7.47□□□□□ -1.21
LINC01197-202ENST00000555332 RSPH6AQ9H0K4 717 aa7.46□□□□□ -1.21
LINC01197-202ENST00000555332 HOXD11P31277 338 aaPredicted RBP7.46□□□□□ -1.22
LINC01197-202ENST00000555332 IGSF3O75054 1194 aa7.45□□□□□ -1.22
LINC01197-202ENST00000555332 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.43□□□□□ -1.22
LINC01197-202ENST00000555332 PDIA4P13667 645 aaKnown RBP7.41□□□□□ -1.22
LINC01197-202ENST00000555332 ARID3CA6NKF2 412 aa7.41□□□□□ -1.22
LINC01197-202ENST00000555332 POTEDQ86YR6 584 aa7.4□□□□□ -1.22
LINC01197-202ENST00000555332 SLC24A3Q9HC58 644 aa7.38□□□□□ -1.23
LINC01197-202ENST00000555332 MKRN4PQ13434 485 aaPredicted RBP7.37□□□□□ -1.23
LINC01197-202ENST00000555332 NKX1-1Q15270 411 aaPredicted RBP7.36□□□□□ -1.23
LINC01197-202ENST00000555332 PLEKHG5O94827 1062 aa7.36□□□□□ -1.23
LINC01197-202ENST00000555332 HS6ST3Q8IZP7 471 aa7.36□□□□□ -1.23
LINC01197-202ENST00000555332 PEG3Q9GZU2 1588 aa7.35□□□□□ -1.23
LINC01197-202ENST00000555332 APBB1O00213 710 aa7.33□□□□□ -1.24
LINC01197-202ENST00000555332 GTPBP6O43824 516 aaPredicted RBP7.33□□□□□ -1.24
LINC01197-202ENST00000555332 ZC3H15Q8WU90 426 aaKnown RBP7.33□□□□□ -1.24
LINC01197-202ENST00000555332 ZNF219Q9P2Y4 722 aaPredicted RBP7.32□□□□□ -1.24
LINC01197-202ENST00000555332 CDK11BP21127 795 aaKnown RBP7.31□□□□□ -1.24
LINC01197-202ENST00000555332 KCTD17Q8N5Z5 321 aa7.31□□□□□ -1.24
LINC01197-202ENST00000555332 CDK11AQ9UQ88 783 aaPredicted RBP7.31□□□□□ -1.24
LINC01197-202ENST00000555332 CIZ1Q9ULV3 898 aaPredicted RBP7.3□□□□□ -1.24
LINC01197-202ENST00000555332 RAD21O60216 631 aa7.29□□□□□ -1.24
LINC01197-202ENST00000555332 P3H3Q8IVL6 736 aa7.29□□□□□ -1.24
LINC01197-202ENST00000555332 KCNV2Q8TDN2 545 aa7.29□□□□□ -1.24
LINC01197-202ENST00000555332 ZNF428Q96B54 188 aa7.28□□□□□ -1.24
LINC01197-202ENST00000555332 EIF4G1Q04637 1599 aaKnown RBP7.27□□□□□ -1.25
LINC01197-202ENST00000555332 CHMP4AQ9BY43 222 aa7.26□□□□□ -1.25
LINC01197-202ENST00000555332 SAMD1Q6SPF0 538 aaPredicted RBP7.26□□□□□ -1.25
LINC01197-202ENST00000555332 CC2D2AQ9P2K1 1620 aa7.26□□□□□ -1.25
LINC01197-202ENST00000555332 IL27Q8NEV9 243 aa7.25□□□□□ -1.25
LINC01197-202ENST00000555332 GPBP1L1Q9HC44 474 aaPredicted RBP7.24□□□□□ -1.25
LINC01197-202ENST00000555332 SMARCA2P51531 1590 aa7.24□□□□□ -1.25
LINC01197-202ENST00000555332 HSP90B1P14625 803 aaKnown RBP7.24□□□□□ -1.25
LINC01197-202ENST00000555332 RNF25Q96BH1 459 aaPredicted RBP7.24□□□□□ -1.25
LINC01197-202ENST00000555332 MTMR7Q9Y216 660 aa7.24□□□□□ -1.25
LINC01197-202ENST00000555332 RGS22Q8NE09 1264 aa7.24□□□□□ -1.25
LINC01197-202ENST00000555332 PRDM2Q13029 1718 aa7.24□□□□□ -1.25
LINC01197-202ENST00000555332 HMGXB3Q12766 1538 aa7.22□□□□□ -1.25
LINC01197-202ENST00000555332 MKRN3Q13064 507 aaKnown RBP7.22□□□□□ -1.25
LINC01197-202ENST00000555332 HMGB1P09429 215 aaKnown RBP7.21□□□□□ -1.25
LINC01197-202ENST00000555332 FOXD4L5Q5VV16 416 aaPredicted RBP7.21□□□□□ -1.25
LINC01197-202ENST00000555332 CCDC82Q8N4S0 544 aa7.21□□□□□ -1.25
LINC01197-202ENST00000555332 FOXD4L4Q8WXT5 416 aaPredicted RBP7.21□□□□□ -1.25
LINC01197-202ENST00000555332 RBM25P49756 843 aaKnown RBP7.21□□□□□ -1.26
LINC01197-202ENST00000555332 PLCD3Q8N3E9 789 aa7.21□□□□□ -1.26
LINC01197-202ENST00000555332 AEBP1Q8IUX7 1158 aa7.2□□□□□ -1.26
LINC01197-202ENST00000555332 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.19□□□□□ -1.26
LINC01197-202ENST00000555332 HNRNPUL2Q1KMD3 747 aaKnown RBP7.19□□□□□ -1.26
LINC01197-202ENST00000555332 TRIM41Q8WV44 630 aa7.17□□□□□ -1.26
LINC01197-202ENST00000555332 PUS7Q96PZ0 661 aaKnown RBP7.16□□□□□ -1.26
LINC01197-202ENST00000555332 WDR70Q9NW82 654 aa7.14□□□□□ -1.27
LINC01197-202ENST00000555332 U3KPZ7 1027 aaPredicted RBP7.14□□□□□ -1.27
LINC01197-202ENST00000555332 ZMYND10O75800 440 aa7.14□□□□□ -1.27
LINC01197-202ENST00000555332 TMCO4Q5TGY1 634 aa7.13□□□□□ -1.27
LINC01197-202ENST00000555332 MFAP1P55081 439 aaKnown RBP7.12□□□□□ -1.27
LINC01197-202ENST00000555332 STK25O00506 426 aa7.12□□□□□ -1.27
LINC01197-202ENST00000555332 CADPS2Q86UW7 1296 aa7.12□□□□□ -1.27
LINC01197-202ENST00000555332 MIER1Q8N108 512 aa7.12□□□□□ -1.27
LINC01197-202ENST00000555332 THOC2Q8NI27 1593 aaKnown RBP7.11□□□□□ -1.27
LINC01197-202ENST00000555332 SEMA3EO15041 775 aa7.11□□□□□ -1.27
LINC01197-202ENST00000555332 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.11□□□□□ -1.27
LINC01197-202ENST00000555332 TRAIPQ9BWF2 469 aa7.11□□□□□ -1.27
LINC01197-202ENST00000555332 KDM4CQ9H3R0 1056 aa7.1□□□□□ -1.27
LINC01197-202ENST00000555332 POLA2Q14181 598 aa7.1□□□□□ -1.27
LINC01197-202ENST00000555332 GZF1Q9H116 711 aaPredicted RBP7.1□□□□□ -1.27
LINC01197-202ENST00000555332 CUX2O14529 1486 aa7.1□□□□□ -1.27
LINC01197-202ENST00000555332 DHX37Q8IY37 1157 aaKnown RBP7.08□□□□□ -1.28
LINC01197-202ENST00000555332 CLUAP1Q96AJ1 413 aa7.08□□□□□ -1.28
LINC01197-202ENST00000555332 USP35Q9P2H5 1018 aa7.07□□□□□ -1.28
LINC01197-202ENST00000555332 NCAPD3P42695 1498 aa7.07□□□□□ -1.28
LINC01197-202ENST00000555332 SMARCA4P51532 1647 aa7.06□□□□□ -1.28
LINC01197-202ENST00000555332 TESPA1A2RU30 521 aaPredicted RBP7.05□□□□□ -1.28
LINC01197-202ENST00000555332 RIOK3O14730 519 aaKnown RBP7.04□□□□□ -1.28
LINC01197-202ENST00000555332 E9PSI1 815 aa7.04□□□□□ -1.28
LINC01197-202ENST00000555332 TRAK2O60296 914 aa7.04□□□□□ -1.28
LINC01197-202ENST00000555332 BARGINQ6ZT62 677 aa7.04□□□□□ -1.28
LINC01197-202ENST00000555332 STAG3Q9UJ98 1225 aa7.04□□□□□ -1.28
LINC01197-202ENST00000555332 SCRIBQ14160 1630 aa7.02□□□□□ -1.29
LINC01197-202ENST00000555332 AK7Q96M32 723 aa7.02□□□□□ -1.29
LINC01197-202ENST00000555332 LAMC3Q9Y6N6 1575 aa7.02□□□□□ -1.29
LINC01197-202ENST00000555332 RETREG2Q8NC44 543 aa7.01□□□□□ -1.29
LINC01197-202ENST00000555332 FAM117AQ9C073 453 aa7.01□□□□□ -1.29
LINC01197-202ENST00000555332 FLIIQ13045 1269 aa7□□□□□ -1.29
LINC01197-202ENST00000555332 ARHGEF1Q92888 912 aaKnown RBP7□□□□□ -1.29
LINC01197-202ENST00000555332 IRF5Q13568 498 aa7□□□□□ -1.29
LINC01197-202ENST00000555332 POLR3GLQ9BT43 218 aa7□□□□□ -1.29
LINC01197-202ENST00000555332 WDR97A6NE52 1622 aa7□□□□□ -1.29
LINC01197-202ENST00000555332 ZNF316A6NFI3 1004 aaPredicted RBP7□□□□□ -1.29
LINC01197-202ENST00000555332 STK24Q9Y6E0 443 aa7□□□□□ -1.29
LINC01197-202ENST00000555332 ZNF777Q9ULD5 760 aaPredicted RBP6.99□□□□□ -1.29
LINC01197-202ENST00000555332 BCL11BQ9C0K0 894 aaPredicted RBP6.99□□□□□ -1.29
LINC01197-202ENST00000555332 ONECUT3O60422 494 aaPredicted RBP6.98□□□□□ -1.29
LINC01197-202ENST00000555332 FBXW7Q969H0 707 aa6.98□□□□□ -1.29
LINC01197-202ENST00000555332 FAM177A1Q8N128 213 aaPredicted RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms