RNA–Protein interactions for RNA: ENST00000555127.1

HNRNPC-215, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 929 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-215ENST00000555127 CREBZFQ9NS37 354 aa12.78□□□□□ -0.36
HNRNPC-215ENST00000555127 POTEGQ6S5H5 508 aa12.77□□□□□ -0.37
HNRNPC-215ENST00000555127 PELP1Q8IZL8 1130 aaKnown RBP12.73□□□□□ -0.37
HNRNPC-215ENST00000555127 PHF12Q96QT6 1004 aa12.71□□□□□ -0.37
HNRNPC-215ENST00000555127 POTEJP0CG39 1038 aa12.63□□□□□ -0.39
HNRNPC-215ENST00000555127 CECR2Q9BXF3 1484 aa12.61□□□□□ -0.39
HNRNPC-215ENST00000555127 EIF4G1Q04637 1599 aaKnown RBP12.59□□□□□ -0.39
HNRNPC-215ENST00000555127 LCE2DQ5TA82 110 aaPredicted RBP12.55□□□□□ -0.4
HNRNPC-215ENST00000555127 METRNQ9UJH8 293 aa12.54□□□□□ -0.4
HNRNPC-215ENST00000555127 PAK3O75914 559 aaPredicted RBP12.53□□□□□ -0.4
HNRNPC-215ENST00000555127 STAG3Q9UJ98 1225 aa12.51□□□□□ -0.41
HNRNPC-215ENST00000555127 CC2D2AQ9P2K1 1620 aa12.51□□□□□ -0.41
HNRNPC-215ENST00000555127 MS4A3Q96HJ5 214 aa12.5□□□□□ -0.41
HNRNPC-215ENST00000555127 PCDH10Q9P2E7 1040 aa12.49□□□□□ -0.41
HNRNPC-215ENST00000555127 ATMINO43313 823 aaPredicted RBP12.48□□□□□ -0.41
HNRNPC-215ENST00000555127 MNX1P50219 401 aaPredicted RBP12.48□□□□□ -0.41
HNRNPC-215ENST00000555127 ASTLQ6HA08 431 aaPredicted RBP12.48□□□□□ -0.41
HNRNPC-215ENST00000555127 FAM163AQ96GL9 167 aaPredicted RBP12.46□□□□□ -0.41
HNRNPC-215ENST00000555127 MROH2BQ7Z745 1585 aa12.44□□□□□ -0.42
HNRNPC-215ENST00000555127 SMARCA4P51532 1647 aa12.42□□□□□ -0.42
HNRNPC-215ENST00000555127 C7P10643 843 aa12.42□□□□□ -0.42
HNRNPC-215ENST00000555127 SLC39A7Q92504 469 aa12.42□□□□□ -0.42
HNRNPC-215ENST00000555127 NPM1P06748 294 aaKnown RBP eCLIP12.39□□□□□ -0.43
HNRNPC-215ENST00000555127 ATAD2BQ9ULI0 1458 aa12.38□□□□□ -0.43
HNRNPC-215ENST00000555127 BAZ1AQ9NRL2 1556 aaPredicted RBP12.37□□□□□ -0.43
HNRNPC-215ENST00000555127 ATN1P54259 1190 aaPredicted RBP12.36□□□□□ -0.43
HNRNPC-215ENST00000555127 MAMSTRQ6ZN01 415 aa12.36□□□□□ -0.43
HNRNPC-215ENST00000555127 SPDYE4A6NLX3 237 aa12.35□□□□□ -0.43
HNRNPC-215ENST00000555127 DNAJC5Q9H3Z4 198 aa12.35□□□□□ -0.43
HNRNPC-215ENST00000555127 NCAPD3P42695 1498 aa12.34□□□□□ -0.43
HNRNPC-215ENST00000555127 POTEFA5A3E0 1075 aa12.34□□□□□ -0.43
HNRNPC-215ENST00000555127 RSF1Q96T23 1441 aaPredicted RBP12.33□□□□□ -0.44
HNRNPC-215ENST00000555127 PEG3Q9GZU2 1588 aa12.31□□□□□ -0.44
HNRNPC-215ENST00000555127 TSPYL2Q9H2G4 693 aaPredicted RBP12.29□□□□□ -0.44
HNRNPC-215ENST00000555127 SCUBE2Q9NQ36 999 aa12.29□□□□□ -0.44
HNRNPC-215ENST00000555127 TRPC6Q9Y210 931 aa12.28□□□□□ -0.44
HNRNPC-215ENST00000555127 SMARCA2P51531 1590 aa12.26□□□□□ -0.45
HNRNPC-215ENST00000555127 WIZO95785 1651 aa12.26□□□□□ -0.45
HNRNPC-215ENST00000555127 CSRNP3Q8WYN3 585 aa12.25□□□□□ -0.45
HNRNPC-215ENST00000555127 HMGXB3Q12766 1538 aa12.24□□□□□ -0.45
HNRNPC-215ENST00000555127 BMP2KQ9NSY1 1161 aaPredicted RBP12.23□□□□□ -0.45
HNRNPC-215ENST00000555127 CCDC61Q9Y6R9 512 aa12.23□□□□□ -0.45
HNRNPC-215ENST00000555127 CDAN1Q8IWY9 1227 aa12.2□□□□□ -0.46
HNRNPC-215ENST00000555127 KIF12Q96FN5 646 aa12.2□□□□□ -0.46
HNRNPC-215ENST00000555127 BAZ1BQ9UIG0 1483 aaKnown RBP12.2□□□□□ -0.46
HNRNPC-215ENST00000555127 COLQQ9Y215 455 aaPredicted RBP12.18□□□□□ -0.46
HNRNPC-215ENST00000555127 MAP3K13O43283 966 aa12.13□□□□□ -0.47
HNRNPC-215ENST00000555127 TOP2AP11388 1531 aaKnown RBP12.11□□□□□ -0.47
HNRNPC-215ENST00000555127 NESP48681 1621 aa12.08□□□□□ -0.48
HNRNPC-215ENST00000555127 TIE1P35590 1138 aa12.07□□□□□ -0.48
HNRNPC-215ENST00000555127 EHMT2Q96KQ7 1210 aa12.07□□□□□ -0.48
HNRNPC-215ENST00000555127 TTLL13PA6NNM8 815 aa12.06□□□□□ -0.48
HNRNPC-215ENST00000555127 SEC24BO95487 1268 aa12.06□□□□□ -0.48
HNRNPC-215ENST00000555127 ST18O60284 1047 aa12.04□□□□□ -0.48
HNRNPC-215ENST00000555127 CCDC88BA6NC98 1476 aa12.02□□□□□ -0.48
HNRNPC-215ENST00000555127 RASEFQ8IZ41 740 aa12.02□□□□□ -0.49
HNRNPC-215ENST00000555127 SUPT5HO00267 1087 aaKnown RBP12.01□□□□□ -0.49
HNRNPC-215ENST00000555127 SLAIN1Q8ND83 568 aa11.98□□□□□ -0.49
HNRNPC-215ENST00000555127 TRIM35Q9UPQ4 493 aa11.98□□□□□ -0.49
HNRNPC-215ENST00000555127 CADPSQ9ULU8 1353 aa11.97□□□□□ -0.49
HNRNPC-215ENST00000555127 MMRN1Q13201 1228 aa11.95□□□□□ -0.5
HNRNPC-215ENST00000555127 PROM2Q8N271 834 aa11.94□□□□□ -0.5
HNRNPC-215ENST00000555127 CUX2O14529 1486 aa11.94□□□□□ -0.5
HNRNPC-215ENST00000555127 CFTRP13569 1480 aa11.94□□□□□ -0.5
HNRNPC-215ENST00000555127 SPNS2Q8IVW8 549 aa11.93□□□□□ -0.5
HNRNPC-215ENST00000555127 IER5LQ5T953 404 aa11.9□□□□□ -0.5
HNRNPC-215ENST00000555127 LAMC3Q9Y6N6 1575 aa11.9□□□□□ -0.5
HNRNPC-215ENST00000555127 PCDHB13Q9Y5F0 798 aa11.87□□□□□ -0.51
HNRNPC-215ENST00000555127 MIER1Q8N108 512 aa11.86□□□□□ -0.51
HNRNPC-215ENST00000555127 IFNL1Q8IU54 200 aa11.83□□□□□ -0.52
HNRNPC-215ENST00000555127 MARVELD3Q96A59 401 aa11.82□□□□□ -0.52
HNRNPC-215ENST00000555127 PDS5BQ9NTI5 1447 aa11.82□□□□□ -0.52
HNRNPC-215ENST00000555127 THOC2Q8NI27 1593 aaKnown RBP11.82□□□□□ -0.52
HNRNPC-215ENST00000555127 ERCC6Q03468 1493 aa11.82□□□□□ -0.52
HNRNPC-215ENST00000555127 FANCD2Q9BXW9 1451 aa11.82□□□□□ -0.52
HNRNPC-215ENST00000555127 KIF21AQ7Z4S6 1674 aa11.81□□□□□ -0.52
HNRNPC-215ENST00000555127 TMEM106CQ9BVX2 250 aa11.8□□□□□ -0.52
HNRNPC-215ENST00000555127 PLCG2P16885 1265 aa11.79□□□□□ -0.52
HNRNPC-215ENST00000555127 SGIP1Q9BQI5 828 aa11.79□□□□□ -0.52
HNRNPC-215ENST00000555127 IRX5P78411 483 aaPredicted RBP11.78□□□□□ -0.52
HNRNPC-215ENST00000555127 URB2Q14146 1524 aaKnown RBP11.76□□□□□ -0.53
HNRNPC-215ENST00000555127 PLEKHG5O94827 1062 aa11.76□□□□□ -0.53
HNRNPC-215ENST00000555127 MRC2Q9UBG0 1479 aa11.75□□□□□ -0.53
HNRNPC-215ENST00000555127 CEP164Q9UPV0 1460 aa11.75□□□□□ -0.53
HNRNPC-215ENST00000555127 TMEM121BQ9BXQ6 578 aaPredicted RBP11.73□□□□□ -0.53
HNRNPC-215ENST00000555127 WDR62O43379 1518 aa11.72□□□□□ -0.53
HNRNPC-215ENST00000555127 NUBP1P53384 320 aa11.72□□□□□ -0.53
HNRNPC-215ENST00000555127 PRDM2Q13029 1718 aa11.69□□□□□ -0.54
HNRNPC-215ENST00000555127 PLCD3Q8N3E9 789 aa11.67□□□□□ -0.54
HNRNPC-215ENST00000555127 TOPBP1Q92547 1522 aa11.66□□□□□ -0.54
HNRNPC-215ENST00000555127 POTEB3A0JP26 581 aa11.66□□□□□ -0.54
HNRNPC-215ENST00000555127 POTEBQ6S5H4 581 aa11.66□□□□□ -0.54
HNRNPC-215ENST00000555127 OCEL1Q9H607 264 aa11.66□□□□□ -0.54
HNRNPC-215ENST00000555127 CUX1P39880 1505 aa11.65□□□□□ -0.54
HNRNPC-215ENST00000555127 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.64□□□□□ -0.55
HNRNPC-215ENST00000555127 SNPHO15079 494 aa11.63□□□□□ -0.55
HNRNPC-215ENST00000555127 KRTAP3-3Q9BYR6 98 aa11.63□□□□□ -0.55
HNRNPC-215ENST00000555127 KRTAP3-2Q9BYR7 98 aa11.63□□□□□ -0.55
HNRNPC-215ENST00000555127 TRIM41Q8WV44 630 aa11.62□□□□□ -0.55
HNRNPC-215ENST00000555127 ABCC8Q09428 1581 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms