RNA–Protein interactions for RNA: ENST00000553635.5

SRSF5-205, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2 BASIC

Gene SRSF5, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-205ENST00000553635 CFTRP13569 1480 aa20.21■□□□□ 0.83
SRSF5-205ENST00000553635 SSUH2Q9Y2M2 353 aa20.19■□□□□ 0.82
SRSF5-205ENST00000553635 CCDC88BA6NC98 1476 aa20.17■□□□□ 0.82
SRSF5-205ENST00000553635 FANCD2Q9BXW9 1451 aa20.13■□□□□ 0.81
SRSF5-205ENST00000553635 MRC2Q9UBG0 1479 aa20.12■□□□□ 0.81
SRSF5-205ENST00000553635 CEP164Q9UPV0 1460 aa20.1■□□□□ 0.81
SRSF5-205ENST00000553635 SPDYE1Q8NFV5 336 aaPredicted RBP20.09■□□□□ 0.81
SRSF5-205ENST00000553635 CLEC11AQ9Y240 323 aa20.09■□□□□ 0.81
SRSF5-205ENST00000553635 PIP4P2Q8N4L2 257 aa20.07■□□□□ 0.8
SRSF5-205ENST00000553635 WDR62O43379 1518 aa20.06■□□□□ 0.8
SRSF5-205ENST00000553635 DNAJC5Q9H3Z4 198 aa20■□□□□ 0.79
SRSF5-205ENST00000553635 FXR2P51116 673 aaKnown RBP eCLIP19.99■□□□□ 0.79
SRSF5-205ENST00000553635 URB2Q14146 1524 aaKnown RBP19.96■□□□□ 0.79
SRSF5-205ENST00000553635 PRDM2Q13029 1718 aa19.94■□□□□ 0.78
SRSF5-205ENST00000553635 SPDYE4A6NLX3 237 aa19.83■□□□□ 0.76
SRSF5-205ENST00000553635 TOPBP1Q92547 1522 aa19.79■□□□□ 0.76
SRSF5-205ENST00000553635 PRR29P0C7W0 189 aa19.78■□□□□ 0.76
SRSF5-205ENST00000553635 TRIM41Q8WV44 630 aa19.78■□□□□ 0.76
SRSF5-205ENST00000553635 PRKAR2AP13861 404 aaKnown RBP19.76■□□□□ 0.75
SRSF5-205ENST00000553635 ABCC8Q09428 1581 aa19.73■□□□□ 0.75
SRSF5-205ENST00000553635 DNMBPQ6XZF7 1577 aa19.72■□□□□ 0.75
SRSF5-205ENST00000553635 HAX1O00165 279 aa19.71■□□□□ 0.75
SRSF5-205ENST00000553635 IFT140Q96RY7 1462 aa19.7■□□□□ 0.74
SRSF5-205ENST00000553635 ZNF608Q9ULD9 1512 aaPredicted RBP19.67■□□□□ 0.74
SRSF5-205ENST00000553635 POLA1P09884 1462 aaPredicted RBP19.61■□□□□ 0.73
SRSF5-205ENST00000553635 CHADLQ6NUI6 762 aa19.6■□□□□ 0.73
SRSF5-205ENST00000553635 CUX1P39880 1505 aa19.58■□□□□ 0.73
SRSF5-205ENST00000553635 TARBP1Q13395 1621 aaKnown RBP19.58■□□□□ 0.72
SRSF5-205ENST00000553635 STAG3Q9UJ98 1225 aa19.58■□□□□ 0.72
SRSF5-205ENST00000553635 RAD54L2Q9Y4B4 1467 aa19.56■□□□□ 0.72
SRSF5-205ENST00000553635 FGD5Q6ZNL6 1462 aa19.54■□□□□ 0.72
SRSF5-205ENST00000553635 SOGA1O94964 1423 aa19.53■□□□□ 0.72
SRSF5-205ENST00000553635 SP7Q8TDD2 431 aaPredicted RBP19.53■□□□□ 0.72
SRSF5-205ENST00000553635 AQRO60306 1485 aaKnown RBP eCLIP19.53■□□□□ 0.723e-8■■■■□ 24.7
SRSF5-205ENST00000553635 EIF4G3O43432 1585 aaKnown RBP19.53■□□□□ 0.72
SRSF5-205ENST00000553635 TDRD9Q8NDG6 1382 aaKnown RBP19.47■□□□□ 0.71
SRSF5-205ENST00000553635 WRNQ14191 1432 aaPredicted RBP eCLIP19.41■□□□□ 0.7
SRSF5-205ENST00000553635 EVX2Q03828 476 aa19.37■□□□□ 0.69
SRSF5-205ENST00000553635 WDR97A6NE52 1622 aa19.35■□□□□ 0.69
SRSF5-205ENST00000553635 SYNJ1O43426 1573 aa19.35■□□□□ 0.69
SRSF5-205ENST00000553635 LOC105371045A0A1W2PR82 267 aa19.34■□□□□ 0.69
SRSF5-205ENST00000553635 C19orf67A6NJJ6 358 aa19.34■□□□□ 0.69
SRSF5-205ENST00000553635 FARP1Q9Y4F1 1045 aaPredicted RBP19.34■□□□□ 0.69
SRSF5-205ENST00000553635 TOP2BQ02880 1626 aa19.33■□□□□ 0.69
SRSF5-205ENST00000553635 ABCA10Q8WWZ4 1543 aa19.33■□□□□ 0.68
SRSF5-205ENST00000553635 SNAPC4Q5SXM2 1469 aa19.33■□□□□ 0.68
SRSF5-205ENST00000553635 FAM9AQ8IZU1 332 aaPredicted RBP19.33■□□□□ 0.68
SRSF5-205ENST00000553635 BIVM-ERCC5R4GMW8 1640 aa19.32■□□□□ 0.68
SRSF5-205ENST00000553635 GRIN2BQ13224 1484 aa19.31■□□□□ 0.68
SRSF5-205ENST00000553635 EEA1Q15075 1411 aa19.31■□□□□ 0.68
SRSF5-205ENST00000553635 CHD1O14646 1710 aa19.3■□□□□ 0.68
SRSF5-205ENST00000553635 GAPVD1Q14C86 1478 aa19.29■□□□□ 0.68
SRSF5-205ENST00000553635 PROM2Q8N271 834 aa19.27■□□□□ 0.68
SRSF5-205ENST00000553635 CREBZFQ9NS37 354 aa19.27■□□□□ 0.68
SRSF5-205ENST00000553635 MAGI1Q96QZ7 1491 aaPredicted RBP19.26■□□□□ 0.67
SRSF5-205ENST00000553635 ABCA5Q8WWZ7 1642 aa19.26■□□□□ 0.67
SRSF5-205ENST00000553635 CHMP7Q8WUX9 453 aaPredicted RBP19.23■□□□□ 0.67
SRSF5-205ENST00000553635 PBRM1Q86U86 1689 aa19.22■□□□□ 0.67
SRSF5-205ENST00000553635 SYNJ2O15056 1496 aa19.2■□□□□ 0.66
SRSF5-205ENST00000553635 RIMBP3CA6NJZ7 1639 aa19.19■□□□□ 0.66
SRSF5-205ENST00000553635 RIMBP3BA6NNM3 1639 aa19.19■□□□□ 0.66
SRSF5-205ENST00000553635 RIMBP3Q9UFD9 1639 aa19.19■□□□□ 0.66
SRSF5-205ENST00000553635 ARHGEF11O15085 1522 aa19.18■□□□□ 0.66
SRSF5-205ENST00000553635 FKBP8Q14318 412 aa19.17■□□□□ 0.66
SRSF5-205ENST00000553635 CD44P16070 742 aaKnown RBP19.17■□□□□ 0.66
SRSF5-205ENST00000553635 CLASP1Q7Z460 1538 aa19.13■□□□□ 0.65
SRSF5-205ENST00000553635 ADAMTS12P58397 1594 aa19.09■□□□□ 0.65
SRSF5-205ENST00000553635 ERICH3Q5RHP9 1530 aa19.08■□□□□ 0.64
SRSF5-205ENST00000553635 GRIN2AQ12879 1464 aa19.06■□□□□ 0.64
SRSF5-205ENST00000553635 FHAD1B1AJZ9 1412 aa19.06■□□□□ 0.64
SRSF5-205ENST00000553635 CYB5RLQ6IPT4 315 aa19.05■□□□□ 0.64
SRSF5-205ENST00000553635 ARAP1Q96P48 1450 aa19.03■□□□□ 0.64
SRSF5-205ENST00000553635 NPM1P06748 294 aaKnown RBP eCLIP19.03■□□□□ 0.64
SRSF5-205ENST00000553635 GABBR2O75899 941 aa19■□□□□ 0.63
SRSF5-205ENST00000553635 RUSC2Q8N2Y8 1516 aa19■□□□□ 0.63
SRSF5-205ENST00000553635 NUP160Q12769 1436 aa19■□□□□ 0.63
SRSF5-205ENST00000553635 CEP170Q5SW79 1584 aa18.99■□□□□ 0.63
SRSF5-205ENST00000553635 KIF27Q86VH2 1401 aa18.97■□□□□ 0.63
SRSF5-205ENST00000553635 ZRANB1Q9UGI0 708 aa18.97■□□□□ 0.63
SRSF5-205ENST00000553635 IGF1RP08069 1367 aa18.97■□□□□ 0.63
SRSF5-205ENST00000553635 TNIKQ9UKE5 1360 aa18.97■□□□□ 0.63
SRSF5-205ENST00000553635 GOLGA3Q08378 1498 aa18.96■□□□□ 0.63
SRSF5-205ENST00000553635 PLEKHG5O94827 1062 aa18.95■□□□□ 0.62
SRSF5-205ENST00000553635 MIER1Q8N108 512 aa18.94■□□□□ 0.62
SRSF5-205ENST00000553635 UBTFP17480 764 aaKnown RBP18.93■□□□□ 0.62
SRSF5-205ENST00000553635 MNX1P50219 401 aaPredicted RBP18.93■□□□□ 0.62
SRSF5-205ENST00000553635 PAK3O75914 559 aaPredicted RBP18.92■□□□□ 0.62
SRSF5-205ENST00000553635 KIF21BO75037 1637 aa18.92■□□□□ 0.62
SRSF5-205ENST00000553635 ERCC6L2Q5T890 1561 aa18.89■□□□□ 0.61
SRSF5-205ENST00000553635 CLCN6P51797 869 aa18.85■□□□□ 0.61
SRSF5-205ENST00000553635 SHROOM2Q13796 1616 aa18.85■□□□□ 0.61
SRSF5-205ENST00000553635 CUL7Q14999 1698 aa18.84■□□□□ 0.61
SRSF5-205ENST00000553635 PLCD3Q8N3E9 789 aa18.83■□□□□ 0.61
SRSF5-205ENST00000553635 CARMIL1Q5VZK9 1371 aa18.83■□□□□ 0.61
SRSF5-205ENST00000553635 ZNF579Q8NAF0 562 aaKnown RBP18.83■□□□□ 0.6
SRSF5-205ENST00000553635 JPH4Q96JJ6 628 aa18.82■□□□□ 0.6
SRSF5-205ENST00000553635 CEP162Q5TB80 1403 aa18.81■□□□□ 0.6
SRSF5-205ENST00000553635 PRG4Q92954 1404 aaPredicted RBP18.79■□□□□ 0.6
SRSF5-205ENST00000553635 PRXQ9BXM0 1461 aa18.79■□□□□ 0.6
SRSF5-205ENST00000553635 KIAA0586Q9BVV6 1533 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms