RNA–Protein interactions for RNA: ENST00000551765.5

GATC-203, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GATC, Length 4,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-203ENST00000551765 DAXXQ9UER7 740 aaPredicted RBP18.4■□□□□ 0.54
GATC-203ENST00000551765 CHMP7Q8WUX9 453 aaPredicted RBP18.4■□□□□ 0.54
GATC-203ENST00000551765 MRS2Q9HD23 443 aa18.37■□□□□ 0.53
GATC-203ENST00000551765 SMARCA4P51532 1647 aa18.36■□□□□ 0.53
GATC-203ENST00000551765 CLSPNQ9HAW4 1339 aa18.36■□□□□ 0.53
GATC-203ENST00000551765 ATAD2BQ9ULI0 1458 aa18.33■□□□□ 0.52
GATC-203ENST00000551765 EIF4G2P78344 907 aaKnown RBP eCLIP18.31■□□□□ 0.52
GATC-203ENST00000551765 TDRD9Q8NDG6 1382 aaKnown RBP18.29■□□□□ 0.52
GATC-203ENST00000551765 FOXD1Q16676 465 aa18.29■□□□□ 0.52
GATC-203ENST00000551765 TSPY4P0CV99 314 aa18.28■□□□□ 0.52
GATC-203ENST00000551765 TSPY10P0CW01 314 aa18.28■□□□□ 0.52
GATC-203ENST00000551765 SENP3Q9H4L4 574 aaPredicted RBP18.28■□□□□ 0.52
GATC-203ENST00000551765 RGL3Q3MIN7 710 aa18.27■□□□□ 0.52
GATC-203ENST00000551765 KCNH8Q96L42 1107 aa18.26■□□□□ 0.51
GATC-203ENST00000551765 CHGAP10645 457 aaKnown RBP18.25■□□□□ 0.51
GATC-203ENST00000551765 TMC1Q8TDI8 760 aa18.25■□□□□ 0.51
GATC-203ENST00000551765 BCL11AQ9H165 835 aa18.25■□□□□ 0.51
GATC-203ENST00000551765 RAB3GAP2Q9H2M9 1393 aa18.25■□□□□ 0.51
GATC-203ENST00000551765 NPM2Q86SE8 214 aaKnown RBP18.25■□□□□ 0.51
GATC-203ENST00000551765 SMARCA2P51531 1590 aa18.25■□□□□ 0.51
GATC-203ENST00000551765 SUPT16HQ9Y5B9 1047 aaKnown RBP18.23■□□□□ 0.51
GATC-203ENST00000551765 CFDP1Q9UEE9 299 aaPredicted RBP18.22■□□□□ 0.51
GATC-203ENST00000551765 RTL5Q5HYW3 569 aaPredicted RBP18.22■□□□□ 0.51
GATC-203ENST00000551765 SETD5Q9C0A6 1442 aa18.17■□□□□ 0.5
GATC-203ENST00000551765 FHAD1B1AJZ9 1412 aa18.16■□□□□ 0.5
GATC-203ENST00000551765 EIF4G1Q04637 1599 aaKnown RBP18.16■□□□□ 0.5
GATC-203ENST00000551765 FHOD3Q2V2M9 1422 aa18.16■□□□□ 0.5
GATC-203ENST00000551765 PLEKHD1A6NEE1 506 aa18.16■□□□□ 0.5
GATC-203ENST00000551765 DHX57Q6P158 1386 aaKnown RBP18.13■□□□□ 0.49
GATC-203ENST00000551765 CCDC136Q96JN2 1154 aa18.12■□□□□ 0.49
GATC-203ENST00000551765 CADPSQ9ULU8 1353 aa18.1■□□□□ 0.49
GATC-203ENST00000551765 CANXP27824 592 aaKnown RBP18.09■□□□□ 0.49
GATC-203ENST00000551765 HSPA5P11021 654 aaKnown RBP18.05■□□□□ 0.48
GATC-203ENST00000551765 CARD11Q9BXL7 1154 aa18.05■□□□□ 0.48
GATC-203ENST00000551765 ARHGAP35Q9NRY4 1499 aa18.05■□□□□ 0.48
GATC-203ENST00000551765 PPP1R15AO75807 674 aaPredicted RBP18.04■□□□□ 0.48
GATC-203ENST00000551765 ANP32AP39687 249 aaKnown RBP18.03■□□□□ 0.48
GATC-203ENST00000551765 NBR1Q14596 966 aa18.02■□□□□ 0.47
GATC-203ENST00000551765 IGF1RP08069 1367 aa17.99■□□□□ 0.47
GATC-203ENST00000551765 PLPPR3Q6T4P5 718 aa17.99■□□□□ 0.47
GATC-203ENST00000551765 B4GALNT3Q6L9W6 998 aa17.98■□□□□ 0.47
GATC-203ENST00000551765 SYNJ1O43426 1573 aa17.98■□□□□ 0.47
GATC-203ENST00000551765 DCAF11Q8TEB1 546 aa17.97■□□□□ 0.47
GATC-203ENST00000551765 MPHOSPH9Q99550 1183 aa17.96■□□□□ 0.47
GATC-203ENST00000551765 L3MBTL2Q969R5 705 aa17.95■□□□□ 0.46
GATC-203ENST00000551765 KIF21BO75037 1637 aa17.94■□□□□ 0.46
GATC-203ENST00000551765 PKD2Q13563 968 aa17.93■□□□□ 0.46
GATC-203ENST00000551765 RAD54L2Q9Y4B4 1467 aa17.93■□□□□ 0.46
GATC-203ENST00000551765 ERCC6Q03468 1493 aa17.92■□□□□ 0.46
GATC-203ENST00000551765 TIMELESSQ9UNS1 1208 aa17.91■□□□□ 0.46
GATC-203ENST00000551765 NPM1P06748 294 aaKnown RBP eCLIP17.91■□□□□ 0.46
GATC-203ENST00000551765 WDR43Q15061 677 aaKnown RBP eCLIP17.91■□□□□ 0.46
GATC-203ENST00000551765 SLC24A1O60721 1099 aa17.91■□□□□ 0.46
GATC-203ENST00000551765 CC2D1BQ5T0F9 858 aaKnown RBP17.9■□□□□ 0.46
GATC-203ENST00000551765 ARAP1Q96P48 1450 aa17.9■□□□□ 0.46
GATC-203ENST00000551765 FMN1Q68DA7 1419 aa17.9■□□□□ 0.46
GATC-203ENST00000551765 FANCD2Q9BXW9 1451 aa17.88■□□□□ 0.45
GATC-203ENST00000551765 PHLDB1Q86UU1 1377 aa17.88■□□□□ 0.45
GATC-203ENST00000551765 STAG3Q9UJ98 1225 aa17.87■□□□□ 0.45
GATC-203ENST00000551765 FGD5Q6ZNL6 1462 aa17.87■□□□□ 0.45
GATC-203ENST00000551765 CCER2I3L3R5 266 aa17.84■□□□□ 0.45
GATC-203ENST00000551765 PDS5BQ9NTI5 1447 aa17.84■□□□□ 0.45
GATC-203ENST00000551765 NEUROD2Q15784 382 aa17.82■□□□□ 0.44
GATC-203ENST00000551765 TNNT2P45379 298 aaPredicted RBP17.81■□□□□ 0.44
GATC-203ENST00000551765 ZBTB47Q9UFB7 747 aaPredicted RBP17.81■□□□□ 0.44
GATC-203ENST00000551765 HNRNPMP52272 730 aaKnown RBP eCLIP17.8■□□□□ 0.44
GATC-203ENST00000551765 TSHZ2Q9NRE2 1034 aa17.8■□□□□ 0.44
GATC-203ENST00000551765 ZNF644Q9H582 1327 aaPredicted RBP17.79■□□□□ 0.44
GATC-203ENST00000551765 RBM19Q9Y4C8 960 aaKnown RBP17.78■□□□□ 0.44
GATC-203ENST00000551765 NEFMP07197 916 aa17.78■□□□□ 0.44
GATC-203ENST00000551765 PPP4R2Q9NY27 417 aa17.77■□□□□ 0.44
GATC-203ENST00000551765 NUP155O75694 1391 aa17.77■□□□□ 0.44
GATC-203ENST00000551765 KNSTRNQ9Y448 316 aa17.77■□□□□ 0.43
GATC-203ENST00000551765 NCAPD3P42695 1498 aa17.76■□□□□ 0.43
GATC-203ENST00000551765 ANP32EQ9BTT0 268 aa17.76■□□□□ 0.43
GATC-203ENST00000551765 DNAJC5BQ9UF47 199 aa17.72■□□□□ 0.43
GATC-203ENST00000551765 JPH4Q96JJ6 628 aa17.72■□□□□ 0.43
GATC-203ENST00000551765 NESP48681 1621 aa17.71■□□□□ 0.43
GATC-203ENST00000551765 ESF1Q9H501 851 aaKnown RBP17.71■□□□□ 0.43
GATC-203ENST00000551765 PRXQ9BXM0 1461 aa17.7■□□□□ 0.42
GATC-203ENST00000551765 ARXQ96QS3 562 aa17.69■□□□□ 0.42
GATC-203ENST00000551765 CCDC18Q5T9S5 1454 aa17.69■□□□□ 0.42
GATC-203ENST00000551765 CUX1P39880 1505 aa17.68■□□□□ 0.42
GATC-203ENST00000551765 LRRC9Q6ZRR7 1453 aa17.68■□□□□ 0.42
GATC-203ENST00000551765 PLEKHG5O94827 1062 aa17.66■□□□□ 0.42
GATC-203ENST00000551765 CFTRP13569 1480 aa17.66■□□□□ 0.42
GATC-203ENST00000551765 SAFB2Q14151 953 aaKnown RBP eCLIP17.66■□□□□ 0.42
GATC-203ENST00000551765 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.66■□□□□ 0.42
GATC-203ENST00000551765 PPM1GO15355 546 aaPredicted RBP17.66■□□□□ 0.42
GATC-203ENST00000551765 AQRO60306 1485 aaKnown RBP eCLIP17.65■□□□□ 0.42
GATC-203ENST00000551765 ST20-MTHFSA0A0A6YYL1 179 aa17.64■□□□□ 0.42
GATC-203ENST00000551765 RGS3P49796 1198 aa17.64■□□□□ 0.42
GATC-203ENST00000551765 BICRAQ9NZM4 1560 aa17.64■□□□□ 0.41
GATC-203ENST00000551765 GAPVD1Q14C86 1478 aa17.64■□□□□ 0.41
GATC-203ENST00000551765 FGD6Q6ZV73 1430 aa17.64■□□□□ 0.41
GATC-203ENST00000551765 PRKRIP1Q9H875 184 aaPredicted RBP17.61■□□□□ 0.41
GATC-203ENST00000551765 LAS1LQ9Y4W2 734 aaKnown RBP17.61■□□□□ 0.41
GATC-203ENST00000551765 TMF1P82094 1093 aa17.61■□□□□ 0.41
GATC-203ENST00000551765 GGT6Q6P531 493 aa17.61■□□□□ 0.41
GATC-203ENST00000551765 FRAT1Q92837 279 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms