RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, humanhuman

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-213ENST00000546120 BCANQ96GW7 911 aa14.02□□□□□ -0.17
UBC-213ENST00000546120 PEG3Q9GZU2 1588 aa14.01□□□□□ -0.17
UBC-213ENST00000546120 SETD5Q9C0A6 1442 aa14.01□□□□□ -0.17
UBC-213ENST00000546120 NOP58Q9Y2X3 529 aaKnown RBP14.01□□□□□ -0.17
UBC-213ENST00000546120 RTL5Q5HYW3 569 aaPredicted RBP14□□□□□ -0.17
UBC-213ENST00000546120 SYNJ1O43426 1573 aa13.99□□□□□ -0.17
UBC-213ENST00000546120 PRXQ9BXM0 1461 aa13.97□□□□□ -0.17
UBC-213ENST00000546120 DDX10Q13206 875 aaKnown RBP13.96□□□□□ -0.17
UBC-213ENST00000546120 RAPGEF2Q9Y4G8 1499 aa13.94□□□□□ -0.18
UBC-213ENST00000546120 MAPKBP1O60336 1514 aa13.94□□□□□ -0.18
UBC-213ENST00000546120 HMGXB3Q12766 1538 aa13.94□□□□□ -0.18
UBC-213ENST00000546120 RAB3GAP2Q9H2M9 1393 aa13.94□□□□□ -0.18
UBC-213ENST00000546120 ANP32AP39687 249 aaKnown RBP13.93□□□□□ -0.18
UBC-213ENST00000546120 UBE2Q2Q8WVN8 375 aa13.92□□□□□ -0.18
UBC-213ENST00000546120 ARAP1Q96P48 1450 aa13.92□□□□□ -0.18
UBC-213ENST00000546120 C11orf95C9JLR9 678 aaPredicted RBP13.9□□□□□ -0.18
UBC-213ENST00000546120 IPO9Q96P70 1041 aaKnown RBP13.89□□□□□ -0.19
UBC-213ENST00000546120 TOP2BQ02880 1626 aa13.88□□□□□ -0.19
UBC-213ENST00000546120 KCNH8Q96L42 1107 aa13.87□□□□□ -0.19
UBC-213ENST00000546120 FHAD1B1AJZ9 1412 aa13.87□□□□□ -0.19
UBC-213ENST00000546120 ZBTB47Q9UFB7 747 aaPredicted RBP13.86□□□□□ -0.19
UBC-213ENST00000546120 PPM1GO15355 546 aaPredicted RBP13.85□□□□□ -0.19
UBC-213ENST00000546120 WDR97A6NE52 1622 aa13.84□□□□□ -0.19
UBC-213ENST00000546120 ITGAEP38570 1179 aa13.84□□□□□ -0.19
UBC-213ENST00000546120 TRIM52Q96A61 297 aa13.84□□□□□ -0.19
UBC-213ENST00000546120 ZBED9Q6R2W3 1325 aa13.84□□□□□ -0.19
UBC-213ENST00000546120 WASHC2AQ641Q2 1341 aa13.82□□□□□ -0.2
UBC-213ENST00000546120 HNRNPUQ00839 825 aaKnown RBP eCLIP13.81□□□□□ -0.2
UBC-213ENST00000546120 BIVM-ERCC5R4GMW8 1640 aa13.81□□□□□ -0.2
UBC-213ENST00000546120 ERCC6Q03468 1493 aa13.8□□□□□ -0.2
UBC-213ENST00000546120 NESP48681 1621 aa13.8□□□□□ -0.2
UBC-213ENST00000546120 KANK4Q5T7N3 995 aaPredicted RBP13.8□□□□□ -0.2
UBC-213ENST00000546120 TONSLQ96HA7 1378 aa13.8□□□□□ -0.2
UBC-213ENST00000546120 KIF27Q86VH2 1401 aa13.8□□□□□ -0.2
UBC-213ENST00000546120 TIAM1Q13009 1591 aa13.76□□□□□ -0.21
UBC-213ENST00000546120 WASHC2CQ9Y4E1 1318 aa13.76□□□□□ -0.21
UBC-213ENST00000546120 RNF123Q5XPI4 1314 aa13.75□□□□□ -0.21
UBC-213ENST00000546120 MS4A1P11836 297 aa13.74□□□□□ -0.21
UBC-213ENST00000546120 CCDC136Q96JN2 1154 aa13.74□□□□□ -0.21
UBC-213ENST00000546120 LRRC9Q6ZRR7 1453 aa13.74□□□□□ -0.21
UBC-213ENST00000546120 SMG6Q86US8 1419 aaKnown RBP13.73□□□□□ -0.21
UBC-213ENST00000546120 DDRGK1Q96HY6 314 aa13.73□□□□□ -0.21
UBC-213ENST00000546120 RSPH6AQ9H0K4 717 aa13.73□□□□□ -0.21
UBC-213ENST00000546120 TCERG1O14776 1098 aaKnown RBP13.72□□□□□ -0.21
UBC-213ENST00000546120 NCOA2Q15596 1464 aa13.72□□□□□ -0.21
UBC-213ENST00000546120 UACAQ9BZF9 1416 aa13.72□□□□□ -0.21
UBC-213ENST00000546120 LAMC3Q9Y6N6 1575 aa13.71□□□□□ -0.21
UBC-213ENST00000546120 GLIPR1L2Q4G1C9 344 aa13.71□□□□□ -0.21
UBC-213ENST00000546120 ARHGAP35Q9NRY4 1499 aa13.71□□□□□ -0.21
UBC-213ENST00000546120 ANO8Q9HCE9 1232 aaPredicted RBP13.7□□□□□ -0.22
UBC-213ENST00000546120 AQRO60306 1485 aaKnown RBP eCLIP13.68□□□□□ -0.222e-11■■■■■ 51
UBC-213ENST00000546120 CCDC18Q5T9S5 1454 aa13.68□□□□□ -0.22
UBC-213ENST00000546120 CNTLNQ9NXG0 1405 aa13.68□□□□□ -0.22
UBC-213ENST00000546120 ARID4BQ4LE39 1312 aaPredicted RBP13.66□□□□□ -0.22
UBC-213ENST00000546120 KIF21AQ7Z4S6 1674 aa13.66□□□□□ -0.22
UBC-213ENST00000546120 HFM1A2PYH4 1435 aa13.65□□□□□ -0.22
UBC-213ENST00000546120 NBR1Q14596 966 aa13.65□□□□□ -0.22
UBC-213ENST00000546120 CADPSQ9ULU8 1353 aa13.64□□□□□ -0.23
UBC-213ENST00000546120 EIF4G2P78344 907 aaKnown RBP eCLIP13.64□□□□□ -0.23
UBC-213ENST00000546120 SIN3AQ96ST3 1273 aa13.63□□□□□ -0.23
UBC-213ENST00000546120 PDS5BQ9NTI5 1447 aa13.63□□□□□ -0.23
UBC-213ENST00000546120 NUDCQ9Y266 331 aa13.62□□□□□ -0.23
UBC-213ENST00000546120 KTN1Q86UP2 1357 aaKnown RBP13.61□□□□□ -0.23
UBC-213ENST00000546120 PRKRIP1Q9H875 184 aaPredicted RBP13.61□□□□□ -0.23
UBC-213ENST00000546120 SALL2Q9Y467 1007 aaPredicted RBP13.61□□□□□ -0.23
UBC-213ENST00000546120 CFAP43Q8NDM7 1665 aa13.6□□□□□ -0.23
UBC-213ENST00000546120 PAK3O75914 559 aaPredicted RBP13.6□□□□□ -0.23
UBC-213ENST00000546120 THOC2Q8NI27 1593 aaKnown RBP13.59□□□□□ -0.23
UBC-213ENST00000546120 B4GALNT3Q6L9W6 998 aa13.59□□□□□ -0.23
UBC-213ENST00000546120 FYCO1Q9BQS8 1478 aa13.59□□□□□ -0.23
UBC-213ENST00000546120 AKNAQ7Z591 1439 aa13.58□□□□□ -0.24
UBC-213ENST00000546120 GSE1Q14687 1217 aa13.58□□□□□ -0.24
UBC-213ENST00000546120 FAM43AQ8N2R8 423 aa13.58□□□□□ -0.24
UBC-213ENST00000546120 EFCAB5A4FU69 1503 aa13.58□□□□□ -0.24
UBC-213ENST00000546120 PHLDB1Q86UU1 1377 aa13.58□□□□□ -0.24
UBC-213ENST00000546120 NCOA1Q15788 1441 aa13.57□□□□□ -0.24
UBC-213ENST00000546120 FMN1Q68DA7 1419 aa13.57□□□□□ -0.24
UBC-213ENST00000546120 NEFMP07197 916 aa13.57□□□□□ -0.24
UBC-213ENST00000546120 ABCA5Q8WWZ7 1642 aa13.55□□□□□ -0.24
UBC-213ENST00000546120 PDE3BQ13370 1112 aa13.55□□□□□ -0.24
UBC-213ENST00000546120 MRS2Q9HD23 443 aa13.55□□□□□ -0.24
UBC-213ENST00000546120 CUX1P39880 1505 aa13.54□□□□□ -0.24
UBC-213ENST00000546120 FAM50AQ14320 339 aaKnown RBP13.54□□□□□ -0.24
UBC-213ENST00000546120 INSRP06213 1382 aa13.54□□□□□ -0.24
UBC-213ENST00000546120 CASKIN1Q8WXD9 1431 aa13.54□□□□□ -0.24
UBC-213ENST00000546120 ROCK2O75116 1388 aaKnown RBP13.53□□□□□ -0.24
UBC-213ENST00000546120 CCDC7Q96M83 1385 aa13.53□□□□□ -0.24
UBC-213ENST00000546120 FGD6Q6ZV73 1430 aa13.51□□□□□ -0.25
UBC-213ENST00000546120 IRX6P78412 446 aaPredicted RBP13.51□□□□□ -0.25
UBC-213ENST00000546120 CFTRP13569 1480 aa13.5□□□□□ -0.25
UBC-213ENST00000546120 MIA2Q96PC5 1412 aa13.5□□□□□ -0.25
UBC-213ENST00000546120 HSPA5P11021 654 aaKnown RBP13.5□□□□□ -0.25
UBC-213ENST00000546120 BACH2Q9BYV9 841 aa13.5□□□□□ -0.25
UBC-213ENST00000546120 DNAJC5Q9H3Z4 198 aa13.5□□□□□ -0.25
UBC-213ENST00000546120 DAXXQ9UER7 740 aaPredicted RBP13.5□□□□□ -0.25
UBC-213ENST00000546120 FANCD2Q9BXW9 1451 aa13.49□□□□□ -0.25
UBC-213ENST00000546120 MRC2Q9UBG0 1479 aa13.49□□□□□ -0.25
UBC-213ENST00000546120 IL27Q8NEV9 243 aa13.49□□□□□ -0.25
UBC-213ENST00000546120 PTPN23Q9H3S7 1636 aa13.48□□□□□ -0.25
UBC-213ENST00000546120 KDM5BQ9UGL1 1544 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms