RNA–Protein interactions for RNA: ENST00000545250.5

TSC1-208, Transcript of TSC complex subunit 1, humanhuman

TSL 5 BASIC

Gene TSC1, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-208ENST00000545250 CALRP27797 417 aaKnown RBP11.93□□□□□ -0.5
TSC1-208ENST00000545250 CCDC136Q96JN2 1154 aa11.93□□□□□ -0.5
TSC1-208ENST00000545250 FGD1P98174 961 aa11.92□□□□□ -0.5
TSC1-208ENST00000545250 NBR1Q14596 966 aa11.91□□□□□ -0.5
TSC1-208ENST00000545250 ERICH6BQ5W0A0 696 aa11.9□□□□□ -0.5
TSC1-208ENST00000545250 A0A0U1RQG5 324 aaPredicted RBP11.9□□□□□ -0.5
TSC1-208ENST00000545250 TMC1Q8TDI8 760 aa11.88□□□□□ -0.51
TSC1-208ENST00000545250 ZNF777Q9ULD5 760 aaPredicted RBP11.87□□□□□ -0.51
TSC1-208ENST00000545250 TMX4Q9H1E5 349 aaPredicted RBP11.87□□□□□ -0.51
TSC1-208ENST00000545250 CHMP4BQ9H444 224 aaKnown RBP11.86□□□□□ -0.51
TSC1-208ENST00000545250 GOLGA6L4A6NEF3 574 aa11.86□□□□□ -0.51
TSC1-208ENST00000545250 GOLGA6L1Q8N7Z2 621 aa11.85□□□□□ -0.51
TSC1-208ENST00000545250 ISY1Q9ULR0 285 aaKnown RBP11.85□□□□□ -0.51
TSC1-208ENST00000545250 PLCB2Q00722 1185 aa11.84□□□□□ -0.51
TSC1-208ENST00000545250 NAP1L5Q96NT1 182 aaPredicted RBP11.84□□□□□ -0.51
TSC1-208ENST00000545250 CEP89Q96ST8 783 aa11.83□□□□□ -0.52
TSC1-208ENST00000545250 PPP1R15AO75807 674 aaPredicted RBP11.83□□□□□ -0.52
TSC1-208ENST00000545250 KCNJ4P48050 445 aa11.83□□□□□ -0.52
TSC1-208ENST00000545250 TONSLQ96HA7 1378 aa11.82□□□□□ -0.52
TSC1-208ENST00000545250 NAP1L2Q9ULW6 460 aaPredicted RBP11.82□□□□□ -0.52
TSC1-208ENST00000545250 GNL2Q13823 731 aaKnown RBP11.82□□□□□ -0.52
TSC1-208ENST00000545250 TNNT3P45378 269 aaPredicted RBP11.81□□□□□ -0.52
TSC1-208ENST00000545250 SETQ01105 290 aaPredicted RBP11.81□□□□□ -0.52
TSC1-208ENST00000545250 DRC7Q8IY82 874 aa11.8□□□□□ -0.52
TSC1-208ENST00000545250 OS9Q13438 667 aaPredicted RBP11.8□□□□□ -0.52
TSC1-208ENST00000545250 HNRNPUQ00839 825 aaKnown RBP eCLIP11.79□□□□□ -0.52
TSC1-208ENST00000545250 FKBP8Q14318 412 aa11.79□□□□□ -0.52
TSC1-208ENST00000545250 CCDC34Q96HJ3 373 aa11.79□□□□□ -0.52
TSC1-208ENST00000545250 CFAP53Q96M91 514 aa11.78□□□□□ -0.52
TSC1-208ENST00000545250 TPRNQ4KMQ1 711 aa11.78□□□□□ -0.52
TSC1-208ENST00000545250 TAOK2Q9UL54 1235 aa11.78□□□□□ -0.52
TSC1-208ENST00000545250 FTSJ3Q8IY81 847 aaKnown RBP11.78□□□□□ -0.52
TSC1-208ENST00000545250 CFAP44Q96MT7 982 aa11.77□□□□□ -0.52
TSC1-208ENST00000545250 FAM9BQ8IZU0 186 aa11.76□□□□□ -0.53
TSC1-208ENST00000545250 MSNP26038 577 aaKnown RBP11.76□□□□□ -0.53
TSC1-208ENST00000545250 TPM4P67936 248 aa11.75□□□□□ -0.53
TSC1-208ENST00000545250 SALL2Q9Y467 1007 aaPredicted RBP11.75□□□□□ -0.53
TSC1-208ENST00000545250 MCCP23508 829 aa11.75□□□□□ -0.53
TSC1-208ENST00000545250 PLEKHG5O94827 1062 aa11.74□□□□□ -0.53
TSC1-208ENST00000545250 HSP90AB1P08238 724 aaKnown RBP11.73□□□□□ -0.53
TSC1-208ENST00000545250 HTATSF1O43719 755 aaKnown RBP11.73□□□□□ -0.53
TSC1-208ENST00000545250 CNKSR2Q8WXI2 1034 aa11.72□□□□□ -0.53
TSC1-208ENST00000545250 AMER1Q5JTC6 1135 aaPredicted RBP11.71□□□□□ -0.53
TSC1-208ENST00000545250 MS4A1P11836 297 aa11.71□□□□□ -0.54
TSC1-208ENST00000545250 PPM1GO15355 546 aaPredicted RBP11.7□□□□□ -0.54
TSC1-208ENST00000545250 PTMSP20962 102 aa11.69□□□□□ -0.54
TSC1-208ENST00000545250 RRP12Q5JTH9 1297 aaKnown RBP11.68□□□□□ -0.54
TSC1-208ENST00000545250 CDCA8Q53HL2 280 aa11.67□□□□□ -0.54
TSC1-208ENST00000545250 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.66□□□□□ -0.541e-7■□□□□ 9.3
TSC1-208ENST00000545250 MAPK8IP3Q9UPT6 1336 aa11.66□□□□□ -0.54
TSC1-208ENST00000545250 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.64□□□□□ -0.55
TSC1-208ENST00000545250 ARID3CA6NKF2 412 aa11.64□□□□□ -0.55
TSC1-208ENST00000545250 ACIN1Q9UKV3 1341 aaKnown RBP11.64□□□□□ -0.55
TSC1-208ENST00000545250 G3V3G9 751 aa11.64□□□□□ -0.55
TSC1-208ENST00000545250 DCAF8Q5TAQ9 597 aa11.64□□□□□ -0.55
TSC1-208ENST00000545250 TPM3P06753 285 aa11.63□□□□□ -0.55
TSC1-208ENST00000545250 PDE4CQ08493 712 aa11.63□□□□□ -0.55
TSC1-208ENST00000545250 NUDCQ9Y266 331 aa11.63□□□□□ -0.55
TSC1-208ENST00000545250 ARID4BQ4LE39 1312 aaPredicted RBP11.62□□□□□ -0.55
TSC1-208ENST00000545250 LMOD2Q6P5Q4 547 aa11.61□□□□□ -0.55
TSC1-208ENST00000545250 HSCBQ8IWL3 235 aa11.61□□□□□ -0.55
TSC1-208ENST00000545250 TSPY4P0CV99 314 aa11.61□□□□□ -0.55
TSC1-208ENST00000545250 TSPY10P0CW01 314 aa11.61□□□□□ -0.55
TSC1-208ENST00000545250 CCDC70Q6NSX1 233 aa11.61□□□□□ -0.55
TSC1-208ENST00000545250 SYAP1Q96A49 352 aaPredicted RBP11.6□□□□□ -0.55
TSC1-208ENST00000545250 MRS2Q9HD23 443 aa11.6□□□□□ -0.55
TSC1-208ENST00000545250 LOC105371045A0A1W2PR82 267 aa11.6□□□□□ -0.55
TSC1-208ENST00000545250 KIAA1211Q6ZU35 1233 aa11.6□□□□□ -0.55
TSC1-208ENST00000545250 RASSF8Q8NHQ8 419 aa11.59□□□□□ -0.55
TSC1-208ENST00000545250 TCEAL9Q9UHQ7 104 aa11.58□□□□□ -0.56
TSC1-208ENST00000545250 FBXO3Q9UK99 471 aa11.58□□□□□ -0.56
TSC1-208ENST00000545250 LAS1LQ9Y4W2 734 aaKnown RBP11.58□□□□□ -0.56
TSC1-208ENST00000545250 TSR1Q2NL82 804 aaKnown RBP11.57□□□□□ -0.56
TSC1-208ENST00000545250 HMMRO75330 724 aa11.57□□□□□ -0.56
TSC1-208ENST00000545250 TPM2P07951 284 aa11.57□□□□□ -0.56
TSC1-208ENST00000545250 CSPP1Q1MSJ5 1256 aa11.57□□□□□ -0.56
TSC1-208ENST00000545250 CHMP4AQ9BY43 222 aa11.56□□□□□ -0.56
TSC1-208ENST00000545250 VPS53Q5VIR6 699 aa11.55□□□□□ -0.56
TSC1-208ENST00000545250 MARCH6O60337 910 aa11.55□□□□□ -0.56
TSC1-208ENST00000545250 GPS2Q13227 327 aa11.54□□□□□ -0.56
TSC1-208ENST00000545250 DCAF8L1A6NGE4 600 aa11.54□□□□□ -0.56
TSC1-208ENST00000545250 KNSTRNQ9Y448 316 aa11.54□□□□□ -0.56
TSC1-208ENST00000545250 KDM2AQ9Y2K7 1162 aa11.54□□□□□ -0.56
TSC1-208ENST00000545250 HSP90B1P14625 803 aaKnown RBP11.53□□□□□ -0.56
TSC1-208ENST00000545250 P3H3Q8IVL6 736 aa11.53□□□□□ -0.56
TSC1-208ENST00000545250 ANO8Q9HCE9 1232 aaPredicted RBP11.53□□□□□ -0.56
TSC1-208ENST00000545250 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.53□□□□□ -0.561e-6■■■■■ 178.2
TSC1-208ENST00000545250 GPATCH3Q96I76 525 aa11.53□□□□□ -0.56
TSC1-208ENST00000545250 PPP4R2Q9NY27 417 aa11.52□□□□□ -0.56
TSC1-208ENST00000545250 HDGFP51858 240 aaKnown RBP11.51□□□□□ -0.57
TSC1-208ENST00000545250 CTDP1Q9Y5B0 961 aaPredicted RBP11.5□□□□□ -0.57
TSC1-208ENST00000545250 TPM1P09493 284 aa11.5□□□□□ -0.57
TSC1-208ENST00000545250 HDAC5Q9UQL6 1122 aa11.49□□□□□ -0.57
TSC1-208ENST00000545250 CDR1P51861 262 aa11.49□□□□□ -0.57
TSC1-208ENST00000545250 RDXP35241 583 aaKnown RBP11.49□□□□□ -0.57
TSC1-208ENST00000545250 GBP4Q96PP9 640 aa11.49□□□□□ -0.57
TSC1-208ENST00000545250 KIF3AQ9Y496 699 aa11.48□□□□□ -0.57
TSC1-208ENST00000545250 PATL2C9JE40 543 aaKnown RBP11.48□□□□□ -0.57
TSC1-208ENST00000545250 CWC22Q9HCG8 908 aaKnown RBP11.48□□□□□ -0.57
TSC1-208ENST00000545250 DDX10Q13206 875 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms