RNA–Protein interactions for RNA: ENST00000545250.5

TSC1-208, Transcript of TSC complex subunit 1, humanhuman

TSL 5 BASIC

Gene TSC1, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-208ENST00000545250 PELP1Q8IZL8 1130 aaKnown RBP15.28■□□□□ 0.04
TSC1-208ENST00000545250 DCAF8L2P0C7V8 631 aa14.87□□□□□ -0.03
TSC1-208ENST00000545250 CCER1Q8TC90 406 aaPredicted RBP14.57□□□□□ -0.08
TSC1-208ENST00000545250 FAM9AQ8IZU1 332 aaPredicted RBP14.56□□□□□ -0.08
TSC1-208ENST00000545250 ERICH6Q7L0X2 663 aa14.54□□□□□ -0.08
TSC1-208ENST00000545250 APLP2Q06481 763 aa14.25□□□□□ -0.13
TSC1-208ENST00000545250 YTHDC1Q96MU7 727 aaKnown RBP14.11□□□□□ -0.15
TSC1-208ENST00000545250 MYT1Q01538 1121 aa14□□□□□ -0.17
TSC1-208ENST00000545250 DAXXQ9UER7 740 aaPredicted RBP13.9□□□□□ -0.18
TSC1-208ENST00000545250 NEFLP07196 543 aa13.87□□□□□ -0.19
TSC1-208ENST00000545250 CENPBP07199 599 aaPredicted RBP13.86□□□□□ -0.19
TSC1-208ENST00000545250 SUPT5HO00267 1087 aaKnown RBP13.74□□□□□ -0.21
TSC1-208ENST00000545250 EHMT2Q96KQ7 1210 aa13.69□□□□□ -0.22
TSC1-208ENST00000545250 ATP1B4Q9UN42 357 aaPredicted RBP13.48□□□□□ -0.25
TSC1-208ENST00000545250 ZEB1P37275 1124 aaPredicted RBP13.47□□□□□ -0.25
TSC1-208ENST00000545250 ZNF316A6NFI3 1004 aaPredicted RBP13.44□□□□□ -0.26
TSC1-208ENST00000545250 TTBK1Q5TCY1 1321 aaPredicted RBP13.43□□□□□ -0.26
TSC1-208ENST00000545250 MYT1LQ9UL68 1186 aa13.37□□□□□ -0.27
TSC1-208ENST00000545250 RTL5Q5HYW3 569 aaPredicted RBP13.33□□□□□ -0.28
TSC1-208ENST00000545250 PCGF6Q9BYE7 350 aa13.33□□□□□ -0.28
TSC1-208ENST00000545250 CLSPNQ9HAW4 1339 aa13.28□□□□□ -0.28
TSC1-208ENST00000545250 ZBTB47Q9UFB7 747 aaPredicted RBP13.22□□□□□ -0.29
TSC1-208ENST00000545250 RANGAP1P46060 587 aaPredicted RBP13.2□□□□□ -0.3
TSC1-208ENST00000545250 SLC4A1APQ9BWU0 796 aaKnown RBP13.2□□□□□ -0.3
TSC1-208ENST00000545250 SHROOM4Q9ULL8 1493 aa13.14□□□□□ -0.31
TSC1-208ENST00000545250 POLR3GLQ9BT43 218 aa13.13□□□□□ -0.31
TSC1-208ENST00000545250 NEFMP07197 916 aa13.04□□□□□ -0.32
TSC1-208ENST00000545250 UBTFP17480 764 aaKnown RBP13.02□□□□□ -0.32
TSC1-208ENST00000545250 CHIC1Q5VXU3 224 aa13□□□□□ -0.33
TSC1-208ENST00000545250 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.98□□□□□ -0.33
TSC1-208ENST00000545250 HNRNPUL2Q1KMD3 747 aaKnown RBP12.98□□□□□ -0.33
TSC1-208ENST00000545250 CDK11BP21127 795 aaKnown RBP12.96□□□□□ -0.33
TSC1-208ENST00000545250 CDK11AQ9UQ88 783 aaPredicted RBP12.96□□□□□ -0.33
TSC1-208ENST00000545250 ANP32BQ92688 251 aaKnown RBP12.94□□□□□ -0.34
TSC1-208ENST00000545250 SLC24A1O60721 1099 aa12.91□□□□□ -0.34
TSC1-208ENST00000545250 GLIPR1L2Q4G1C9 344 aa12.86□□□□□ -0.35
TSC1-208ENST00000545250 TRIM41Q8WV44 630 aa12.85□□□□□ -0.35
TSC1-208ENST00000545250 CANXP27824 592 aaKnown RBP12.78□□□□□ -0.36
TSC1-208ENST00000545250 CNGB1Q14028 1251 aaPredicted RBP12.78□□□□□ -0.36
TSC1-208ENST00000545250 NISCHQ9Y2I1 1504 aa12.72□□□□□ -0.37
TSC1-208ENST00000545250 HSP90AA1P07900 732 aaKnown RBP12.66□□□□□ -0.38
TSC1-208ENST00000545250 BCANQ96GW7 911 aa12.66□□□□□ -0.38
TSC1-208ENST00000545250 ITGAEP38570 1179 aa12.65□□□□□ -0.38
TSC1-208ENST00000545250 BCL11AQ9H165 835 aa12.63□□□□□ -0.39
TSC1-208ENST00000545250 ANP32AP39687 249 aaKnown RBP12.58□□□□□ -0.4
TSC1-208ENST00000545250 UPF2Q9HAU5 1272 aaKnown RBP12.57□□□□□ -0.4
TSC1-208ENST00000545250 EIF5BO60841 1220 aaKnown RBP12.54□□□□□ -0.4
TSC1-208ENST00000545250 TNNT2P45379 298 aaPredicted RBP12.49□□□□□ -0.41
TSC1-208ENST00000545250 ESF1Q9H501 851 aaKnown RBP12.47□□□□□ -0.41
TSC1-208ENST00000545250 TRIM52Q96A61 297 aa12.45□□□□□ -0.42
TSC1-208ENST00000545250 NPM2Q86SE8 214 aaKnown RBP12.44□□□□□ -0.42
TSC1-208ENST00000545250 ANP32CO43423 234 aa12.43□□□□□ -0.42
TSC1-208ENST00000545250 TRIM26Q12899 539 aaPredicted RBP12.43□□□□□ -0.42
TSC1-208ENST00000545250 TRIM44Q96DX7 344 aaPredicted RBP12.39□□□□□ -0.43
TSC1-208ENST00000545250 ZRSR1Q15695 479 aaKnown RBP12.36□□□□□ -0.43
TSC1-208ENST00000545250 FAM50AQ14320 339 aaKnown RBP12.34□□□□□ -0.43
TSC1-208ENST00000545250 NCLP19338 710 aaKnown RBP12.34□□□□□ -0.43
TSC1-208ENST00000545250 ZNF326Q5BKZ1 582 aaKnown RBP12.33□□□□□ -0.44
TSC1-208ENST00000545250 PPARGC1BQ86YN6 1023 aaKnown RBP12.31□□□□□ -0.44
TSC1-208ENST00000545250 HRCP23327 699 aa12.3□□□□□ -0.44
TSC1-208ENST00000545250 STAG3Q9UJ98 1225 aa12.29□□□□□ -0.44
TSC1-208ENST00000545250 MYH16Q9H6N6 1097 aa12.29□□□□□ -0.44
TSC1-208ENST00000545250 TULP1O00294 542 aaPredicted RBP12.26□□□□□ -0.45
TSC1-208ENST00000545250 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.26□□□□□ -0.45
TSC1-208ENST00000545250 ANP32EQ9BTT0 268 aa12.26□□□□□ -0.45
TSC1-208ENST00000545250 A0A0G2JS52 829 aa12.25□□□□□ -0.45
TSC1-208ENST00000545250 DIEXFQ68CQ4 756 aaKnown RBP12.25□□□□□ -0.45
TSC1-208ENST00000545250 L1TD1Q5T7N2 865 aaKnown RBP12.24□□□□□ -0.45
TSC1-208ENST00000545250 GOLGA6L6A8MZA4 724 aa12.24□□□□□ -0.45
TSC1-208ENST00000545250 NCBP3Q53F19 620 aaKnown RBP12.21□□□□□ -0.45
TSC1-208ENST00000545250 SCAF1Q9H7N4 1312 aaKnown RBP12.21□□□□□ -0.45
TSC1-208ENST00000545250 NEUROD1Q13562 356 aa12.2□□□□□ -0.46
TSC1-208ENST00000545250 GOLGA6L22H0YM25 854 aa12.2□□□□□ -0.46
TSC1-208ENST00000545250 NRDCO43847 1150 aa12.18□□□□□ -0.46
TSC1-208ENST00000545250 PRM3Q9NNZ6 103 aa12.17□□□□□ -0.46
TSC1-208ENST00000545250 KRI1Q8N9T8 703 aaKnown RBP12.14□□□□□ -0.47
TSC1-208ENST00000545250 PTMAP06454 111 aaKnown RBP12.13□□□□□ -0.47
TSC1-208ENST00000545250 CLSTN1O94985 981 aa12.13□□□□□ -0.47
TSC1-208ENST00000545250 DNTTIP2Q5QJE6 756 aaKnown RBP12.12□□□□□ -0.47
TSC1-208ENST00000545250 CASC1Q6TDU7 716 aa12.12□□□□□ -0.47
TSC1-208ENST00000545250 BECN1Q14457 450 aa12.11□□□□□ -0.47
TSC1-208ENST00000545250 NPHP1O15259 732 aa12.1□□□□□ -0.47
TSC1-208ENST00000545250 KIAA2012Q0VF49 1180 aa12.09□□□□□ -0.47
TSC1-208ENST00000545250 ARXQ96QS3 562 aa12.08□□□□□ -0.48
TSC1-208ENST00000545250 HAP1P54257 671 aaPredicted RBP12.06□□□□□ -0.48
TSC1-208ENST00000545250 CHAF1AQ13111 956 aaPredicted RBP12.05□□□□□ -0.48
TSC1-208ENST00000545250 PLPPR3Q6T4P5 718 aa12.05□□□□□ -0.48
TSC1-208ENST00000545250 FBLN2P98095 1184 aa12.04□□□□□ -0.48
TSC1-208ENST00000545250 CHGAP10645 457 aaKnown RBP12.03□□□□□ -0.48
TSC1-208ENST00000545250 GOLGA2Q08379 1002 aa12.02□□□□□ -0.48
TSC1-208ENST00000545250 DDRGK1Q96HY6 314 aa12.02□□□□□ -0.48
TSC1-208ENST00000545250 NOC3LQ8WTT2 800 aaKnown RBP12.02□□□□□ -0.49
TSC1-208ENST00000545250 WDR43Q15061 677 aaKnown RBP eCLIP12.01□□□□□ -0.49
TSC1-208ENST00000545250 NPM1P06748 294 aaKnown RBP eCLIP12.01□□□□□ -0.49
TSC1-208ENST00000545250 PNNQ9H307 717 aaKnown RBP12□□□□□ -0.49
TSC1-208ENST00000545250 USP35Q9P2H5 1018 aa11.99□□□□□ -0.49
TSC1-208ENST00000545250 EIF4G2P78344 907 aaKnown RBP eCLIP11.97□□□□□ -0.49
TSC1-208ENST00000545250 C14orf37Q86TY3 774 aa11.96□□□□□ -0.5
TSC1-208ENST00000545250 ZBTB7CA1YPR0 619 aa11.94□□□□□ -0.5
TSC1-208ENST00000545250 GTF3C3Q9Y5Q9 886 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms