RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 CANXP27824 592 aaKnown RBP9.47□□□□□ -0.89
SRGAP1-206ENST00000543397 KIF27Q86VH2 1401 aa9.47□□□□□ -0.89
SRGAP1-206ENST00000543397 CLIP1P30622 1438 aa9.46□□□□□ -0.89
SRGAP1-206ENST00000543397 EEA1Q15075 1411 aa9.45□□□□□ -0.9
SRGAP1-206ENST00000543397 PPP1R15AO75807 674 aaPredicted RBP9.45□□□□□ -0.9
SRGAP1-206ENST00000543397 TRHP20396 242 aaPredicted RBP9.44□□□□□ -0.9
SRGAP1-206ENST00000543397 SCAF1Q9H7N4 1312 aaKnown RBP9.43□□□□□ -0.9
SRGAP1-206ENST00000543397 BCL11AQ9H165 835 aa9.42□□□□□ -0.9
SRGAP1-206ENST00000543397 ZNF316A6NFI3 1004 aaPredicted RBP9.42□□□□□ -0.9
SRGAP1-206ENST00000543397 DCAF1Q9Y4B6 1507 aa9.42□□□□□ -0.9
SRGAP1-206ENST00000543397 FKBP8Q14318 412 aa9.41□□□□□ -0.9
SRGAP1-206ENST00000543397 CFDP1Q9UEE9 299 aaPredicted RBP9.41□□□□□ -0.9
SRGAP1-206ENST00000543397 KDM2AQ9Y2K7 1162 aa9.41□□□□□ -0.9
SRGAP1-206ENST00000543397 GOLGA3Q08378 1498 aa9.4□□□□□ -0.91
SRGAP1-206ENST00000543397 CECR2Q9BXF3 1484 aa9.39□□□□□ -0.91
SRGAP1-206ENST00000543397 RRP7BPQ9NSQ0 103 aa9.39□□□□□ -0.91
SRGAP1-206ENST00000543397 CFAP44Q96MT7 982 aa9.39□□□□□ -0.91
SRGAP1-206ENST00000543397 PDS5BQ9NTI5 1447 aa9.38□□□□□ -0.91
SRGAP1-206ENST00000543397 SENP3Q9H4L4 574 aaPredicted RBP9.37□□□□□ -0.91
SRGAP1-206ENST00000543397 HMGB1P09429 215 aaKnown RBP9.36□□□□□ -0.91
SRGAP1-206ENST00000543397 GLIPR1L2Q4G1C9 344 aa9.35□□□□□ -0.91
SRGAP1-206ENST00000543397 A0A0G2JS52 829 aa9.34□□□□□ -0.91
SRGAP1-206ENST00000543397 PLCB2Q00722 1185 aa9.34□□□□□ -0.91
SRGAP1-206ENST00000543397 CUX2O14529 1486 aa9.34□□□□□ -0.91
SRGAP1-206ENST00000543397 CEP164Q9UPV0 1460 aa9.33□□□□□ -0.92
SRGAP1-206ENST00000543397 SMARCA2P51531 1590 aa9.33□□□□□ -0.92
SRGAP1-206ENST00000543397 ACIN1Q9UKV3 1341 aaKnown RBP9.33□□□□□ -0.92
SRGAP1-206ENST00000543397 PLEKHG5O94827 1062 aa9.33□□□□□ -0.92
SRGAP1-206ENST00000543397 CEP162Q5TB80 1403 aa9.32□□□□□ -0.92
SRGAP1-206ENST00000543397 A0A0U1RQG5 324 aaPredicted RBP9.32□□□□□ -0.92
SRGAP1-206ENST00000543397 CARMIL1Q5VZK9 1371 aa9.32□□□□□ -0.92
SRGAP1-206ENST00000543397 RGL3Q3MIN7 710 aa9.31□□□□□ -0.92
SRGAP1-206ENST00000543397 EIF4G1Q04637 1599 aaKnown RBP9.31□□□□□ -0.92
SRGAP1-206ENST00000543397 ZBTB7CA1YPR0 619 aa9.31□□□□□ -0.92
SRGAP1-206ENST00000543397 DDX10Q13206 875 aaKnown RBP9.28□□□□□ -0.92
SRGAP1-206ENST00000543397 TMC1Q8TDI8 760 aa9.28□□□□□ -0.92
SRGAP1-206ENST00000543397 RTL5Q5HYW3 569 aaPredicted RBP9.28□□□□□ -0.92
SRGAP1-206ENST00000543397 WDR43Q15061 677 aaKnown RBP eCLIP9.28□□□□□ -0.92
SRGAP1-206ENST00000543397 CARMIL2Q6F5E8 1435 aa9.28□□□□□ -0.92
SRGAP1-206ENST00000543397 CCNB3Q8WWL7 1395 aa9.27□□□□□ -0.92
SRGAP1-206ENST00000543397 PHF23Q9BUL5 403 aaPredicted RBP9.27□□□□□ -0.92
SRGAP1-206ENST00000543397 MLECQ14165 292 aa9.27□□□□□ -0.93
SRGAP1-206ENST00000543397 TNIKQ9UKE5 1360 aa9.27□□□□□ -0.93
SRGAP1-206ENST00000543397 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.27□□□□□ -0.93
SRGAP1-206ENST00000543397 TDRD9Q8NDG6 1382 aaKnown RBP9.26□□□□□ -0.93
SRGAP1-206ENST00000543397 FHAD1B1AJZ9 1412 aa9.26□□□□□ -0.93
SRGAP1-206ENST00000543397 SOGA1O94964 1423 aa9.26□□□□□ -0.93
SRGAP1-206ENST00000543397 FAM9BQ8IZU0 186 aa9.26□□□□□ -0.93
SRGAP1-206ENST00000543397 SALL2Q9Y467 1007 aaPredicted RBP9.25□□□□□ -0.93
SRGAP1-206ENST00000543397 EIF4G2P78344 907 aaKnown RBP eCLIP9.25□□□□□ -0.93
SRGAP1-206ENST00000543397 MROH2BQ7Z745 1585 aa9.25□□□□□ -0.93
SRGAP1-206ENST00000543397 HNRNPUQ00839 825 aaKnown RBP eCLIP9.23□□□□□ -0.93
SRGAP1-206ENST00000543397 CADPSQ9ULU8 1353 aa9.23□□□□□ -0.93
SRGAP1-206ENST00000543397 LMOD2Q6P5Q4 547 aa9.23□□□□□ -0.93
SRGAP1-206ENST00000543397 CCDC88BA6NC98 1476 aa9.23□□□□□ -0.93
SRGAP1-206ENST00000543397 CDCA8Q53HL2 280 aa9.22□□□□□ -0.93
SRGAP1-206ENST00000543397 POGKQ9P215 609 aa9.22□□□□□ -0.93
SRGAP1-206ENST00000543397 FBXO3Q9UK99 471 aa9.22□□□□□ -0.93
SRGAP1-206ENST00000543397 KANK1Q14678 1352 aa9.22□□□□□ -0.93
SRGAP1-206ENST00000543397 HDGFP51858 240 aaKnown RBP9.22□□□□□ -0.93
SRGAP1-206ENST00000543397 PDE4CQ08493 712 aa9.22□□□□□ -0.93
SRGAP1-206ENST00000543397 PDIA4P13667 645 aaKnown RBP9.22□□□□□ -0.93
SRGAP1-206ENST00000543397 MRS2Q9HD23 443 aa9.2□□□□□ -0.94
SRGAP1-206ENST00000543397 MYO15BQ96JP2 1530 aa9.2□□□□□ -0.94
SRGAP1-206ENST00000543397 GGT6Q6P531 493 aa9.2□□□□□ -0.94
SRGAP1-206ENST00000543397 ZNF526Q8TF50 670 aaPredicted RBP9.19□□□□□ -0.94
SRGAP1-206ENST00000543397 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.18□□□□□ -0.94
SRGAP1-206ENST00000543397 HIRIP3Q9BW71 556 aaPredicted RBP9.18□□□□□ -0.94
SRGAP1-206ENST00000543397 CARD11Q9BXL7 1154 aa9.18□□□□□ -0.94
SRGAP1-206ENST00000543397 EFCAB2Q5VUJ9 269 aa9.18□□□□□ -0.94
SRGAP1-206ENST00000543397 CFAP53Q96M91 514 aa9.18□□□□□ -0.94
SRGAP1-206ENST00000543397 PPM1GO15355 546 aaPredicted RBP9.17□□□□□ -0.94
SRGAP1-206ENST00000543397 KNSTRNQ9Y448 316 aa9.16□□□□□ -0.94
SRGAP1-206ENST00000543397 CCDC9Q9Y3X0 531 aaKnown RBP9.16□□□□□ -0.94
SRGAP1-206ENST00000543397 USP35Q9P2H5 1018 aa9.15□□□□□ -0.94
SRGAP1-206ENST00000543397 ATAD2BQ9ULI0 1458 aa9.15□□□□□ -0.94
SRGAP1-206ENST00000543397 PAXIP1Q6ZW49 1069 aaPredicted RBP9.14□□□□□ -0.95
SRGAP1-206ENST00000543397 JPH4Q96JJ6 628 aa9.13□□□□□ -0.95
SRGAP1-206ENST00000543397 TOP2AP11388 1531 aaKnown RBP9.13□□□□□ -0.95
SRGAP1-206ENST00000543397 OSCARQ8IYS5 282 aa9.12□□□□□ -0.95
SRGAP1-206ENST00000543397 UPF2Q9HAU5 1272 aaKnown RBP9.12□□□□□ -0.95
SRGAP1-206ENST00000543397 FMN1Q68DA7 1419 aa9.12□□□□□ -0.95
SRGAP1-206ENST00000543397 ABCC8Q09428 1581 aa9.12□□□□□ -0.95
SRGAP1-206ENST00000543397 MYH16Q9H6N6 1097 aa9.12□□□□□ -0.95
SRGAP1-206ENST00000543397 HSP90AA1P07900 732 aaKnown RBP9.12□□□□□ -0.95
SRGAP1-206ENST00000543397 CYB5RLQ6IPT4 315 aa9.12□□□□□ -0.95
SRGAP1-206ENST00000543397 DCAF11Q8TEB1 546 aa9.1□□□□□ -0.95
SRGAP1-206ENST00000543397 PTMSP20962 102 aa9.1□□□□□ -0.95
SRGAP1-206ENST00000543397 ANP32AP39687 249 aaKnown RBP9.1□□□□□ -0.95
SRGAP1-206ENST00000543397 TMEM132AQ24JP5 1023 aa9.1□□□□□ -0.95
SRGAP1-206ENST00000543397 NUDCQ9Y266 331 aa9.1□□□□□ -0.95
SRGAP1-206ENST00000543397 FANCD2Q9BXW9 1451 aa9.1□□□□□ -0.95
SRGAP1-206ENST00000543397 MAPK8IP3Q9UPT6 1336 aa9.08□□□□□ -0.96
SRGAP1-206ENST00000543397 ARHGAP35Q9NRY4 1499 aa9.08□□□□□ -0.96
SRGAP1-206ENST00000543397 WIZO95785 1651 aa9.08□□□□□ -0.96
SRGAP1-206ENST00000543397 SRPK2P78362 688 aaKnown RBP9.08□□□□□ -0.96
SRGAP1-206ENST00000543397 KIF3BO15066 747 aa9.07□□□□□ -0.96
SRGAP1-206ENST00000543397 SAFB2Q14151 953 aaKnown RBP eCLIP9.07□□□□□ -0.96
SRGAP1-206ENST00000543397 SIN3AQ96ST3 1273 aa9.07□□□□□ -0.96
SRGAP1-206ENST00000543397 RAPGEF2Q9Y4G8 1499 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms