RNA–Protein interactions for RNA: ENST00000543229.5

CCAR1-215, Transcript of cell division cycle and apoptosis regulator 1, humanhuman

TSL 2

Gene CCAR1, Length 2,475 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCAR1-215ENST00000543229 IRX6P78412 446 aaPredicted RBP8.61□□□□□ -1.03
CCAR1-215ENST00000543229 TRIM52Q96A61 297 aa8.6□□□□□ -1.03
CCAR1-215ENST00000543229 BRPF3Q9ULD4 1205 aa8.58□□□□□ -1.04
CCAR1-215ENST00000543229 RTL5Q5HYW3 569 aaPredicted RBP8.58□□□□□ -1.04
CCAR1-215ENST00000543229 VSIG10Q8N0Z9 540 aa8.56□□□□□ -1.04
CCAR1-215ENST00000543229 WRNQ14191 1432 aaPredicted RBP eCLIP8.55□□□□□ -1.04
CCAR1-215ENST00000543229 WASHC2AQ641Q2 1341 aa8.54□□□□□ -1.04
CCAR1-215ENST00000543229 C11orf95C9JLR9 678 aaPredicted RBP8.54□□□□□ -1.04
CCAR1-215ENST00000543229 ATAD2BQ9ULI0 1458 aa8.53□□□□□ -1.04
CCAR1-215ENST00000543229 KIF21AQ7Z4S6 1674 aa8.52□□□□□ -1.05
CCAR1-215ENST00000543229 ABCC8Q09428 1581 aa8.52□□□□□ -1.05
CCAR1-215ENST00000543229 EEA1Q15075 1411 aa8.51□□□□□ -1.05
CCAR1-215ENST00000543229 WASHC2CQ9Y4E1 1318 aa8.51□□□□□ -1.05
CCAR1-215ENST00000543229 HMGXB3Q12766 1538 aa8.51□□□□□ -1.05
CCAR1-215ENST00000543229 OSCARQ8IYS5 282 aa8.51□□□□□ -1.05
CCAR1-215ENST00000543229 A0A0U1RQG5 324 aaPredicted RBP8.5□□□□□ -1.05
CCAR1-215ENST00000543229 LAMC3Q9Y6N6 1575 aa8.49□□□□□ -1.05
CCAR1-215ENST00000543229 IPO9Q96P70 1041 aaKnown RBP8.47□□□□□ -1.05
CCAR1-215ENST00000543229 RSPH6AQ9H0K4 717 aa8.47□□□□□ -1.05
CCAR1-215ENST00000543229 PDS5BQ9NTI5 1447 aa8.47□□□□□ -1.05
CCAR1-215ENST00000543229 B4GALNT3Q6L9W6 998 aa8.47□□□□□ -1.05
CCAR1-215ENST00000543229 DDX10Q13206 875 aaKnown RBP8.46□□□□□ -1.05
CCAR1-215ENST00000543229 NEFMP07197 916 aa8.45□□□□□ -1.06
CCAR1-215ENST00000543229 GLIPR1L2Q4G1C9 344 aa8.45□□□□□ -1.06
CCAR1-215ENST00000543229 ZBTB47Q9UFB7 747 aaPredicted RBP8.45□□□□□ -1.06
CCAR1-215ENST00000543229 CEP162Q5TB80 1403 aa8.45□□□□□ -1.06
CCAR1-215ENST00000543229 LAS1LQ9Y4W2 734 aaKnown RBP8.45□□□□□ -1.06
CCAR1-215ENST00000543229 BAZ1BQ9UIG0 1483 aaKnown RBP8.45□□□□□ -1.06
CCAR1-215ENST00000543229 RIMBP3CA6NJZ7 1639 aa8.44□□□□□ -1.06
CCAR1-215ENST00000543229 RIMBP3BA6NNM3 1639 aa8.44□□□□□ -1.06
CCAR1-215ENST00000543229 RIMBP3Q9UFD9 1639 aa8.44□□□□□ -1.06
CCAR1-215ENST00000543229 DHX57Q6P158 1386 aaKnown RBP8.44□□□□□ -1.06
CCAR1-215ENST00000543229 PPP4R2Q9NY27 417 aa8.43□□□□□ -1.06
CCAR1-215ENST00000543229 TNIKQ9UKE5 1360 aa8.43□□□□□ -1.06
CCAR1-215ENST00000543229 RBM10P98175 930 aaKnown RBP8.43□□□□□ -1.06
CCAR1-215ENST00000543229 SOGA1O94964 1423 aa8.42□□□□□ -1.06
CCAR1-215ENST00000543229 MRC2Q9UBG0 1479 aa8.42□□□□□ -1.06
CCAR1-215ENST00000543229 TRHP20396 242 aaPredicted RBP8.41□□□□□ -1.06
CCAR1-215ENST00000543229 ANP32AP39687 249 aaKnown RBP8.41□□□□□ -1.06
CCAR1-215ENST00000543229 AAMPQ13685 434 aa8.41□□□□□ -1.06
CCAR1-215ENST00000543229 WDR62O43379 1518 aa8.41□□□□□ -1.06
CCAR1-215ENST00000543229 FGD1P98174 961 aa8.41□□□□□ -1.06
CCAR1-215ENST00000543229 SYNJ1O43426 1573 aa8.39□□□□□ -1.07
CCAR1-215ENST00000543229 PDE4CQ08493 712 aa8.39□□□□□ -1.07
CCAR1-215ENST00000543229 KIF21BO75037 1637 aa8.38□□□□□ -1.07
CCAR1-215ENST00000543229 PPP1R15AO75807 674 aaPredicted RBP8.38□□□□□ -1.07
CCAR1-215ENST00000543229 GOLGA3Q08378 1498 aa8.38□□□□□ -1.07
CCAR1-215ENST00000543229 RUSC2Q8N2Y8 1516 aa8.37□□□□□ -1.07
CCAR1-215ENST00000543229 CCER2I3L3R5 266 aa8.37□□□□□ -1.07
CCAR1-215ENST00000543229 GSE1Q14687 1217 aa8.37□□□□□ -1.07
CCAR1-215ENST00000543229 USP35Q9P2H5 1018 aa8.37□□□□□ -1.07
CCAR1-215ENST00000543229 ARHGEF11O15085 1522 aa8.36□□□□□ -1.07
CCAR1-215ENST00000543229 HNRNPUQ00839 825 aaKnown RBP eCLIP8.36□□□□□ -1.07
CCAR1-215ENST00000543229 FAM43AQ8N2R8 423 aa8.36□□□□□ -1.07
CCAR1-215ENST00000543229 DCAF11Q8TEB1 546 aa8.36□□□□□ -1.07
CCAR1-215ENST00000543229 FRAT1Q92837 279 aaPredicted RBP8.36□□□□□ -1.07
CCAR1-215ENST00000543229 TOP2BQ02880 1626 aa8.35□□□□□ -1.07
CCAR1-215ENST00000543229 CEP164Q9UPV0 1460 aa8.35□□□□□ -1.07
CCAR1-215ENST00000543229 BIVM-ERCC5R4GMW8 1640 aa8.35□□□□□ -1.07
CCAR1-215ENST00000543229 CYB5RLQ6IPT4 315 aa8.35□□□□□ -1.07
CCAR1-215ENST00000543229 SIN3AQ96ST3 1273 aa8.35□□□□□ -1.07
CCAR1-215ENST00000543229 HIRIP3Q9BW71 556 aaPredicted RBP8.35□□□□□ -1.07
CCAR1-215ENST00000543229 BCL11BQ9C0K0 894 aaPredicted RBP8.35□□□□□ -1.07
CCAR1-215ENST00000543229 CADPSQ9ULU8 1353 aa8.34□□□□□ -1.07
CCAR1-215ENST00000543229 NPM2Q86SE8 214 aaKnown RBP8.34□□□□□ -1.07
CCAR1-215ENST00000543229 HSP90AA2PQ14568 343 aaPredicted RBP8.33□□□□□ -1.08
CCAR1-215ENST00000543229 RRAGDQ9NQL2 400 aaPredicted RBP8.33□□□□□ -1.08
CCAR1-215ENST00000543229 ANP32CO43423 234 aa8.32□□□□□ -1.08
CCAR1-215ENST00000543229 PDIA4P13667 645 aaKnown RBP8.31□□□□□ -1.08
CCAR1-215ENST00000543229 PRDM2Q13029 1718 aa8.3□□□□□ -1.08
CCAR1-215ENST00000543229 UBTFP17480 764 aaKnown RBP8.3□□□□□ -1.08
CCAR1-215ENST00000543229 RRP9O43818 475 aaKnown RBP8.29□□□□□ -1.08
CCAR1-215ENST00000543229 PPM1GO15355 546 aaPredicted RBP8.28□□□□□ -1.08
CCAR1-215ENST00000543229 NFKBIBQ15653 356 aa8.27□□□□□ -1.09
CCAR1-215ENST00000543229 ERICH3Q5RHP9 1530 aa8.27□□□□□ -1.09
CCAR1-215ENST00000543229 CFTRP13569 1480 aa8.27□□□□□ -1.09
CCAR1-215ENST00000543229 PRDM4Q9UKN5 801 aa8.26□□□□□ -1.09
CCAR1-215ENST00000543229 NAP1L5Q96NT1 182 aaPredicted RBP8.26□□□□□ -1.09
CCAR1-215ENST00000543229 HSP90AA1P07900 732 aaKnown RBP8.25□□□□□ -1.09
CCAR1-215ENST00000543229 ARAP1Q96P48 1450 aa8.25□□□□□ -1.09
CCAR1-215ENST00000543229 FANCD2Q9BXW9 1451 aa8.25□□□□□ -1.09
CCAR1-215ENST00000543229 RGS3P49796 1198 aa8.25□□□□□ -1.09
CCAR1-215ENST00000543229 CLIP1P30622 1438 aa8.25□□□□□ -1.09
CCAR1-215ENST00000543229 RAPGEF2Q9Y4G8 1499 aa8.24□□□□□ -1.09
CCAR1-215ENST00000543229 WDR97A6NE52 1622 aa8.24□□□□□ -1.09
CCAR1-215ENST00000543229 CUX1P39880 1505 aa8.23□□□□□ -1.09
CCAR1-215ENST00000543229 PRXQ9BXM0 1461 aa8.23□□□□□ -1.09
CCAR1-215ENST00000543229 VPS8Q8N3P4 1428 aa8.23□□□□□ -1.09
CCAR1-215ENST00000543229 SLC4A3P48751 1232 aa8.22□□□□□ -1.09
CCAR1-215ENST00000543229 CCDC184Q52MB2 194 aa8.22□□□□□ -1.09
CCAR1-215ENST00000543229 ARID4BQ4LE39 1312 aaPredicted RBP8.21□□□□□ -1.09
CCAR1-215ENST00000543229 ILDR1Q86SU0 546 aaPredicted RBP8.21□□□□□ -1.09
CCAR1-215ENST00000543229 URB2Q14146 1524 aaKnown RBP8.2□□□□□ -1.1
CCAR1-215ENST00000543229 KIF27Q86VH2 1401 aa8.2□□□□□ -1.1
CCAR1-215ENST00000543229 FRAT2O75474 233 aaPredicted RBP8.19□□□□□ -1.1
CCAR1-215ENST00000543229 PDE4AP27815 886 aa8.19□□□□□ -1.1
CCAR1-215ENST00000543229 MAPKBP1O60336 1514 aa8.19□□□□□ -1.1
CCAR1-215ENST00000543229 ZNF608Q9ULD9 1512 aaPredicted RBP8.19□□□□□ -1.1
CCAR1-215ENST00000543229 AKNAQ7Z591 1439 aa8.19□□□□□ -1.1
CCAR1-215ENST00000543229 PNNQ9H307 717 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms