RNA–Protein interactions for RNA: ENST00000540990.5

CACNB3-203, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,814 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-203ENST00000540990 GTF3C3Q9Y5Q9 886 aa24.7■■□□□ 1.54
CACNB3-203ENST00000540990 EFCAB5A4FU69 1503 aa24.68■■□□□ 1.54
CACNB3-203ENST00000540990 POLA1P09884 1462 aaPredicted RBP24.68■■□□□ 1.54
CACNB3-203ENST00000540990 CUL7Q14999 1698 aa24.68■■□□□ 1.54
CACNB3-203ENST00000540990 AQRO60306 1485 aaKnown RBP eCLIP24.65■■□□□ 1.54
CACNB3-203ENST00000540990 PCF11O94913 1555 aaKnown RBP24.63■■□□□ 1.53
CACNB3-203ENST00000540990 RAD54L2Q9Y4B4 1467 aa24.62■■□□□ 1.53
CACNB3-203ENST00000540990 FYCO1Q9BQS8 1478 aa24.6■■□□□ 1.53
CACNB3-203ENST00000540990 LAMC3Q9Y6N6 1575 aa24.59■■□□□ 1.53
CACNB3-203ENST00000540990 WDR97A6NE52 1622 aa24.58■■□□□ 1.53
CACNB3-203ENST00000540990 RAB3GAP2Q9H2M9 1393 aa24.58■■□□□ 1.53
CACNB3-203ENST00000540990 PHLDB1Q86UU1 1377 aa24.58■■□□□ 1.53
CACNB3-203ENST00000540990 MAPKBP1O60336 1514 aa24.57■■□□□ 1.52
CACNB3-203ENST00000540990 CASKIN1Q8WXD9 1431 aa24.57■■□□□ 1.52
CACNB3-203ENST00000540990 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.56■■□□□ 1.52
CACNB3-203ENST00000540990 SETD5Q9C0A6 1442 aa24.55■■□□□ 1.52
CACNB3-203ENST00000540990 CTTNBP2Q8WZ74 1663 aa24.55■■□□□ 1.52
CACNB3-203ENST00000540990 NESP48681 1621 aa24.52■■□□□ 1.52
CACNB3-203ENST00000540990 URB2Q14146 1524 aaKnown RBP24.49■■□□□ 1.51
CACNB3-203ENST00000540990 FHOD3Q2V2M9 1422 aa24.48■■□□□ 1.51
CACNB3-203ENST00000540990 ABCA5Q8WWZ7 1642 aa24.48■■□□□ 1.51
CACNB3-203ENST00000540990 FMN1Q68DA7 1419 aa24.45■■□□□ 1.51
CACNB3-203ENST00000540990 SNAPC4Q5SXM2 1469 aa24.43■■□□□ 1.5
CACNB3-203ENST00000540990 SAMD9Q5K651 1589 aa24.43■■□□□ 1.5
CACNB3-203ENST00000540990 YTHDC1Q96MU7 727 aaKnown RBP24.42■■□□□ 1.5
CACNB3-203ENST00000540990 ITGAEP38570 1179 aa24.4■■□□□ 1.5
CACNB3-203ENST00000540990 TIMELESSQ9UNS1 1208 aa24.38■■□□□ 1.49
CACNB3-203ENST00000540990 THOC2Q8NI27 1593 aaKnown RBP24.36■■□□□ 1.49
CACNB3-203ENST00000540990 PDS5BQ9NTI5 1447 aa24.35■■□□□ 1.49
CACNB3-203ENST00000540990 P3H3Q8IVL6 736 aa24.35■■□□□ 1.49
CACNB3-203ENST00000540990 GAPVD1Q14C86 1478 aa24.34■■□□□ 1.49
CACNB3-203ENST00000540990 FGD6Q6ZV73 1430 aa24.31■■□□□ 1.48
CACNB3-203ENST00000540990 FAM50AQ14320 339 aaKnown RBP24.31■■□□□ 1.48
CACNB3-203ENST00000540990 GRIN2BQ13224 1484 aa24.29■■□□□ 1.48
CACNB3-203ENST00000540990 KIF21AQ7Z4S6 1674 aa24.27■■□□□ 1.48
CACNB3-203ENST00000540990 TARBP1Q13395 1621 aaKnown RBP24.26■■□□□ 1.47
CACNB3-203ENST00000540990 TDRD9Q8NDG6 1382 aaKnown RBP24.25■■□□□ 1.47
CACNB3-203ENST00000540990 LRRIQ1Q96JM4 1722 aa24.23■■□□□ 1.47
CACNB3-203ENST00000540990 EHBP1L1Q8N3D4 1523 aa24.21■■□□□ 1.47
CACNB3-203ENST00000540990 HFM1A2PYH4 1435 aa24.2■■□□□ 1.47
CACNB3-203ENST00000540990 ATP1B4Q9UN42 357 aaPredicted RBP24.2■■□□□ 1.46
CACNB3-203ENST00000540990 ARHGEF11O15085 1522 aa24.19■■□□□ 1.46
CACNB3-203ENST00000540990 MTUS2Q5JR59 1369 aa24.19■■□□□ 1.46
CACNB3-203ENST00000540990 MYOM3Q5VTT5 1437 aa24.17■■□□□ 1.46
CACNB3-203ENST00000540990 NCOA2Q15596 1464 aa24.17■■□□□ 1.46
CACNB3-203ENST00000540990 SUPT6HQ7KZ85 1726 aaKnown RBP24.16■■□□□ 1.46
CACNB3-203ENST00000540990 SIN3AQ96ST3 1273 aa24.14■■□□□ 1.46
CACNB3-203ENST00000540990 PTPN23Q9H3S7 1636 aa24.14■■□□□ 1.46
CACNB3-203ENST00000540990 CCDC18Q5T9S5 1454 aa24.14■■□□□ 1.45
CACNB3-203ENST00000540990 UGGT2Q9NYU1 1516 aa24.14■■□□□ 1.45
CACNB3-203ENST00000540990 PTPRKQ15262 1439 aa24.13■■□□□ 1.45
CACNB3-203ENST00000540990 UACAQ9BZF9 1416 aa24.13■■□□□ 1.45
CACNB3-203ENST00000540990 PPP1R15AO75807 674 aaPredicted RBP24.11■■□□□ 1.45
CACNB3-203ENST00000540990 DNAJC5BQ9UF47 199 aa24.1■■□□□ 1.45
CACNB3-203ENST00000540990 PBRM1Q86U86 1689 aa24.09■■□□□ 1.45
CACNB3-203ENST00000540990 TCOF1Q13428 1488 aaKnown RBP24.09■■□□□ 1.45
CACNB3-203ENST00000540990 NAIPQ13075 1403 aa24.08■■□□□ 1.45
CACNB3-203ENST00000540990 ADAMTS12P58397 1594 aa24.06■■□□□ 1.44
CACNB3-203ENST00000540990 HECW1Q76N89 1606 aa24.06■■□□□ 1.44
CACNB3-203ENST00000540990 MAGI3Q5TCQ9 1506 aa24.05■■□□□ 1.44
CACNB3-203ENST00000540990 IQGAP2Q13576 1575 aa24.04■■□□□ 1.44
CACNB3-203ENST00000540990 AKNAQ7Z591 1439 aa24.03■■□□□ 1.44
CACNB3-203ENST00000540990 MRC2Q9UBG0 1479 aa24■■□□□ 1.43
CACNB3-203ENST00000540990 GCC2Q8IWJ2 1684 aa23.97■■□□□ 1.43
CACNB3-203ENST00000540990 EPRSP07814 1512 aaKnown RBP23.97■■□□□ 1.43
CACNB3-203ENST00000540990 MIA2Q96PC5 1412 aa23.96■■□□□ 1.43
CACNB3-203ENST00000540990 WDR62O43379 1518 aa23.95■■□□□ 1.43
CACNB3-203ENST00000540990 TONSLQ96HA7 1378 aa23.94■■□□□ 1.42
CACNB3-203ENST00000540990 KDM5BQ9UGL1 1544 aa23.94■■□□□ 1.42
CACNB3-203ENST00000540990 SUPT16HQ9Y5B9 1047 aaKnown RBP23.91■■□□□ 1.42
CACNB3-203ENST00000540990 DDX10Q13206 875 aaKnown RBP23.91■■□□□ 1.42
CACNB3-203ENST00000540990 CCER2I3L3R5 266 aa23.89■■□□□ 1.42
CACNB3-203ENST00000540990 IFT140Q96RY7 1462 aa23.89■■□□□ 1.41
CACNB3-203ENST00000540990 KCNH8Q96L42 1107 aa23.85■■□□□ 1.41
CACNB3-203ENST00000540990 DENND4BO75064 1496 aaPredicted RBP23.85■■□□□ 1.41
CACNB3-203ENST00000540990 KIAA0586Q9BVV6 1533 aa23.83■■□□□ 1.41
CACNB3-203ENST00000540990 CDK13Q14004 1512 aaKnown RBP23.82■■□□□ 1.4
CACNB3-203ENST00000540990 KIAA0556O60303 1618 aa23.8■■□□□ 1.4
CACNB3-203ENST00000540990 DISP1Q96F81 1524 aa23.78■■□□□ 1.4
CACNB3-203ENST00000540990 ROCK1Q13464 1354 aa23.78■■□□□ 1.4
CACNB3-203ENST00000540990 KDM6BO15054 1643 aa23.75■■□□□ 1.39
CACNB3-203ENST00000540990 ZNF608Q9ULD9 1512 aaPredicted RBP23.75■■□□□ 1.39
CACNB3-203ENST00000540990 ANP32CO43423 234 aa23.74■■□□□ 1.39
CACNB3-203ENST00000540990 RRP7BPQ9NSQ0 103 aa23.72■■□□□ 1.39
CACNB3-203ENST00000540990 NUP153P49790 1475 aaKnown RBP23.72■■□□□ 1.39
CACNB3-203ENST00000540990 DNMT1P26358 1616 aaKnown RBP23.71■■□□□ 1.39
CACNB3-203ENST00000540990 GRIN2AQ12879 1464 aa23.71■■□□□ 1.39
CACNB3-203ENST00000540990 DAPK1P53355 1430 aa23.7■■□□□ 1.38
CACNB3-203ENST00000540990 RAPGEF6Q8TEU7 1601 aa23.7■■□□□ 1.38
CACNB3-203ENST00000540990 HIRIP3Q9BW71 556 aaPredicted RBP23.68■■□□□ 1.38
CACNB3-203ENST00000540990 MYT1Q01538 1121 aa23.67■■□□□ 1.38
CACNB3-203ENST00000540990 ABCC5O15440 1437 aa23.66■■□□□ 1.38
CACNB3-203ENST00000540990 EIF4G3O43432 1585 aaKnown RBP23.66■■□□□ 1.38
CACNB3-203ENST00000540990 MPHOSPH9Q99550 1183 aa23.65■■□□□ 1.38
CACNB3-203ENST00000540990 CHIC2Q9UKJ5 165 aa23.65■■□□□ 1.38
CACNB3-203ENST00000540990 MAGI1Q96QZ7 1491 aaPredicted RBP23.63■■□□□ 1.37
CACNB3-203ENST00000540990 ANKRD30BQ9BXX2 1392 aa23.6■■□□□ 1.37
CACNB3-203ENST00000540990 RPRD2Q5VT52 1461 aaKnown RBP23.59■■□□□ 1.37
CACNB3-203ENST00000540990 TRIM52Q96A61 297 aa23.59■■□□□ 1.37
CACNB3-203ENST00000540990 TROQ12816 1431 aaPredicted RBP23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms