RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-215ENST00000540783 PRDM2Q13029 1718 aa8.45□□□□□ -1.06
RAPGEF4-215ENST00000540783 MYT1Q01538 1121 aa8.44□□□□□ -1.06
RAPGEF4-215ENST00000540783 RAPGEF2Q9Y4G8 1499 aa8.43□□□□□ -1.06
RAPGEF4-215ENST00000540783 GOLGA3Q08378 1498 aa8.43□□□□□ -1.06
RAPGEF4-215ENST00000540783 WDR97A6NE52 1622 aa8.42□□□□□ -1.06
RAPGEF4-215ENST00000540783 SNAPC4Q5SXM2 1469 aa8.41□□□□□ -1.06
RAPGEF4-215ENST00000540783 JPH4Q96JJ6 628 aa8.41□□□□□ -1.06
RAPGEF4-215ENST00000540783 SYNJ2O15056 1496 aa8.41□□□□□ -1.06
RAPGEF4-215ENST00000540783 IGF1RP08069 1367 aa8.41□□□□□ -1.06
RAPGEF4-215ENST00000540783 ZNF316A6NFI3 1004 aaPredicted RBP8.4□□□□□ -1.06
RAPGEF4-215ENST00000540783 THOC2Q8NI27 1593 aaKnown RBP8.4□□□□□ -1.06
RAPGEF4-215ENST00000540783 SYNJ1O43426 1573 aa8.4□□□□□ -1.06
RAPGEF4-215ENST00000540783 MIER1Q8N108 512 aa8.39□□□□□ -1.07
RAPGEF4-215ENST00000540783 ERICH3Q5RHP9 1530 aa8.39□□□□□ -1.07
RAPGEF4-215ENST00000540783 AEBP2Q6ZN18 517 aaPredicted RBP8.39□□□□□ -1.07
RAPGEF4-215ENST00000540783 P3H3Q8IVL6 736 aa8.38□□□□□ -1.07
RAPGEF4-215ENST00000540783 BIVM-ERCC5R4GMW8 1640 aa8.38□□□□□ -1.07
RAPGEF4-215ENST00000540783 ZNF608Q9ULD9 1512 aaPredicted RBP8.37□□□□□ -1.07
RAPGEF4-215ENST00000540783 MYT1LQ9UL68 1186 aa8.35□□□□□ -1.07
RAPGEF4-215ENST00000540783 CYB5RLQ6IPT4 315 aa8.34□□□□□ -1.07
RAPGEF4-215ENST00000540783 PLEKHD1A6NEE1 506 aa8.33□□□□□ -1.08
RAPGEF4-215ENST00000540783 TRHP20396 242 aaPredicted RBP8.33□□□□□ -1.08
RAPGEF4-215ENST00000540783 PTPRGP23470 1445 aa8.33□□□□□ -1.08
RAPGEF4-215ENST00000540783 TNIKQ9UKE5 1360 aa8.33□□□□□ -1.08
RAPGEF4-215ENST00000540783 GRIN2AQ12879 1464 aa8.33□□□□□ -1.08
RAPGEF4-215ENST00000540783 CUL7Q14999 1698 aa8.32□□□□□ -1.08
RAPGEF4-215ENST00000540783 KIAA0586Q9BVV6 1533 aa8.32□□□□□ -1.08
RAPGEF4-215ENST00000540783 CLIP1P30622 1438 aa8.31□□□□□ -1.08
RAPGEF4-215ENST00000540783 EIF4G3O43432 1585 aaKnown RBP8.31□□□□□ -1.08
RAPGEF4-215ENST00000540783 FMN1Q68DA7 1419 aa8.29□□□□□ -1.08
RAPGEF4-215ENST00000540783 PRG4Q92954 1404 aaPredicted RBP8.29□□□□□ -1.08
RAPGEF4-215ENST00000540783 CEP162Q5TB80 1403 aa8.28□□□□□ -1.08
RAPGEF4-215ENST00000540783 TARBP1Q13395 1621 aaKnown RBP8.27□□□□□ -1.09
RAPGEF4-215ENST00000540783 ARID3CA6NKF2 412 aa8.27□□□□□ -1.09
RAPGEF4-215ENST00000540783 PRXQ9BXM0 1461 aa8.26□□□□□ -1.09
RAPGEF4-215ENST00000540783 MTUS2Q5JR59 1369 aa8.24□□□□□ -1.09
RAPGEF4-215ENST00000540783 ADAMTS12P58397 1594 aa8.24□□□□□ -1.09
RAPGEF4-215ENST00000540783 RUSC2Q8N2Y8 1516 aa8.24□□□□□ -1.09
RAPGEF4-215ENST00000540783 KCNH8Q96L42 1107 aa8.24□□□□□ -1.09
RAPGEF4-215ENST00000540783 ABCA5Q8WWZ7 1642 aa8.23□□□□□ -1.09
RAPGEF4-215ENST00000540783 NUP160Q12769 1436 aa8.23□□□□□ -1.09
RAPGEF4-215ENST00000540783 IQGAP2Q13576 1575 aa8.22□□□□□ -1.09
RAPGEF4-215ENST00000540783 KIF21BO75037 1637 aa8.22□□□□□ -1.09
RAPGEF4-215ENST00000540783 SUPT16HQ9Y5B9 1047 aaKnown RBP8.2□□□□□ -1.1
RAPGEF4-215ENST00000540783 EFCAB5A4FU69 1503 aa8.2□□□□□ -1.1
RAPGEF4-215ENST00000540783 PBRM1Q86U86 1689 aa8.19□□□□□ -1.1
RAPGEF4-215ENST00000540783 ESF1Q9H501 851 aaKnown RBP8.19□□□□□ -1.1
RAPGEF4-215ENST00000540783 UACAQ9BZF9 1416 aa8.18□□□□□ -1.1
RAPGEF4-215ENST00000540783 ZNF777Q9ULD5 760 aaPredicted RBP8.17□□□□□ -1.1
RAPGEF4-215ENST00000540783 FHOD3Q2V2M9 1422 aa8.17□□□□□ -1.1
RAPGEF4-215ENST00000540783 FAM69CQ0P6D2 419 aa8.16□□□□□ -1.1
RAPGEF4-215ENST00000540783 EFCAB2Q5VUJ9 269 aa8.16□□□□□ -1.1
RAPGEF4-215ENST00000540783 TSHZ2Q9NRE2 1034 aa8.16□□□□□ -1.1
RAPGEF4-215ENST00000540783 TSPY4P0CV99 314 aa8.15□□□□□ -1.1
RAPGEF4-215ENST00000540783 TSPY10P0CW01 314 aa8.15□□□□□ -1.1
RAPGEF4-215ENST00000540783 BCANQ96GW7 911 aa8.15□□□□□ -1.1
RAPGEF4-215ENST00000540783 FAM50AQ14320 339 aaKnown RBP8.15□□□□□ -1.1
RAPGEF4-215ENST00000540783 CFDP1Q9UEE9 299 aaPredicted RBP8.14□□□□□ -1.11
RAPGEF4-215ENST00000540783 CCNB3Q8WWL7 1395 aa8.14□□□□□ -1.11
RAPGEF4-215ENST00000540783 CCDC18Q5T9S5 1454 aa8.13□□□□□ -1.11
RAPGEF4-215ENST00000540783 VPS8Q8N3P4 1428 aa8.13□□□□□ -1.11
RAPGEF4-215ENST00000540783 UGGT2Q9NYU1 1516 aa8.13□□□□□ -1.11
RAPGEF4-215ENST00000540783 PLB1Q6P1J6 1458 aa8.12□□□□□ -1.11
RAPGEF4-215ENST00000540783 ANP32EQ9BTT0 268 aa8.11□□□□□ -1.11
RAPGEF4-215ENST00000540783 ARHGEF11O15085 1522 aa8.11□□□□□ -1.11
RAPGEF4-215ENST00000540783 CEP170Q5SW79 1584 aa8.1□□□□□ -1.11
RAPGEF4-215ENST00000540783 RSPH4AQ5TD94 716 aa8.1□□□□□ -1.11
RAPGEF4-215ENST00000540783 CHD1O14646 1710 aa8.1□□□□□ -1.11
RAPGEF4-215ENST00000540783 ITGAEP38570 1179 aa8.09□□□□□ -1.11
RAPGEF4-215ENST00000540783 CASKIN1Q8WXD9 1431 aa8.09□□□□□ -1.11
RAPGEF4-215ENST00000540783 ARID4BQ4LE39 1312 aaPredicted RBP8.08□□□□□ -1.12
RAPGEF4-215ENST00000540783 BCL11AQ9H165 835 aa8.07□□□□□ -1.12
RAPGEF4-215ENST00000540783 FYCO1Q9BQS8 1478 aa8.06□□□□□ -1.12
RAPGEF4-215ENST00000540783 HECW1Q76N89 1606 aa8.06□□□□□ -1.12
RAPGEF4-215ENST00000540783 ARHGAP35Q9NRY4 1499 aa8.06□□□□□ -1.12
RAPGEF4-215ENST00000540783 CLASP1Q7Z460 1538 aa8.05□□□□□ -1.12
RAPGEF4-215ENST00000540783 PHLDB1Q86UU1 1377 aa8.05□□□□□ -1.12
RAPGEF4-215ENST00000540783 FKBP8Q14318 412 aa8.05□□□□□ -1.12
RAPGEF4-215ENST00000540783 KIAA0556O60303 1618 aa8.04□□□□□ -1.12
RAPGEF4-215ENST00000540783 CTTNBP2Q8WZ74 1663 aa8.04□□□□□ -1.12
RAPGEF4-215ENST00000540783 ABCC2Q92887 1545 aa8.04□□□□□ -1.12
RAPGEF4-215ENST00000540783 DHX57Q6P158 1386 aaKnown RBP8.04□□□□□ -1.12
RAPGEF4-215ENST00000540783 TEX14Q8IWB6 1497 aa8.04□□□□□ -1.12
RAPGEF4-215ENST00000540783 TROQ12816 1431 aaPredicted RBP8.03□□□□□ -1.12
RAPGEF4-215ENST00000540783 UHRF1BP1LA0JNW5 1464 aa8.03□□□□□ -1.12
RAPGEF4-215ENST00000540783 CLSPNQ9HAW4 1339 aa8.03□□□□□ -1.12
RAPGEF4-215ENST00000540783 KANK4Q5T7N3 995 aaPredicted RBP8.02□□□□□ -1.13
RAPGEF4-215ENST00000540783 CD109Q6YHK3 1445 aa8.02□□□□□ -1.13
RAPGEF4-215ENST00000540783 PLEKHH2Q8IVE3 1493 aa8.01□□□□□ -1.13
RAPGEF4-215ENST00000540783 ASXL2Q76L83 1435 aa8.01□□□□□ -1.13
RAPGEF4-215ENST00000540783 TRIM52Q96A61 297 aa8.01□□□□□ -1.13
RAPGEF4-215ENST00000540783 DISP1Q96F81 1524 aa8.01□□□□□ -1.13
RAPGEF4-215ENST00000540783 ARAP1Q96P48 1450 aa8.01□□□□□ -1.13
RAPGEF4-215ENST00000540783 SPAG9O60271 1321 aaKnown RBP8□□□□□ -1.13
RAPGEF4-215ENST00000540783 DDX10Q13206 875 aaKnown RBP8□□□□□ -1.13
RAPGEF4-215ENST00000540783 WDR7Q9Y4E6 1490 aa8□□□□□ -1.13
RAPGEF4-215ENST00000540783 HIRIP3Q9BW71 556 aaPredicted RBP7.99□□□□□ -1.13
RAPGEF4-215ENST00000540783 EPRSP07814 1512 aaKnown RBP7.99□□□□□ -1.13
RAPGEF4-215ENST00000540783 RAPGEF6Q8TEU7 1601 aa7.98□□□□□ -1.13
RAPGEF4-215ENST00000540783 RIMBP3CA6NJZ7 1639 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 231.8 ms