RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-215ENST00000540783 NISCHQ9Y2I1 1504 aa11.82□□□□□ -0.52
RAPGEF4-215ENST00000540783 DCAF8L2P0C7V8 631 aa10.44□□□□□ -0.74
RAPGEF4-215ENST00000540783 CCDC180Q9P1Z9 1646 aa10.34□□□□□ -0.75
RAPGEF4-215ENST00000540783 ABCC9O60706 1549 aa10.21□□□□□ -0.77
RAPGEF4-215ENST00000540783 RB1CC1Q8TDY2 1594 aa9.87□□□□□ -0.83
RAPGEF4-215ENST00000540783 NACADO15069 1562 aa9.86□□□□□ -0.83
RAPGEF4-215ENST00000540783 ZCCHC6Q5VYS8 1495 aaKnown RBP9.82□□□□□ -0.84
RAPGEF4-215ENST00000540783 DCAF1Q9Y4B6 1507 aa9.75□□□□□ -0.85
RAPGEF4-215ENST00000540783 MYO15BQ96JP2 1530 aa9.75□□□□□ -0.85
RAPGEF4-215ENST00000540783 SHROOM4Q9ULL8 1493 aa9.72□□□□□ -0.85
RAPGEF4-215ENST00000540783 PABPN1Q86U42 306 aaKnown RBP eCLIP9.67□□□□□ -0.86
RAPGEF4-215ENST00000540783 SCRIBQ14160 1630 aa9.55□□□□□ -0.88
RAPGEF4-215ENST00000540783 SUPT5HO00267 1087 aaKnown RBP9.51□□□□□ -0.89
RAPGEF4-215ENST00000540783 HRCP23327 699 aa9.39□□□□□ -0.91
RAPGEF4-215ENST00000540783 PCGF6Q9BYE7 350 aa9.33□□□□□ -0.92
RAPGEF4-215ENST00000540783 PPARGC1BQ86YN6 1023 aaKnown RBP9.33□□□□□ -0.92
RAPGEF4-215ENST00000540783 BAZ1AQ9NRL2 1556 aaPredicted RBP9.26□□□□□ -0.93
RAPGEF4-215ENST00000540783 CHIC1Q5VXU3 224 aa9.23□□□□□ -0.93
RAPGEF4-215ENST00000540783 SMARCA2P51531 1590 aa9.2□□□□□ -0.94
RAPGEF4-215ENST00000540783 DNAJC5Q9H3Z4 198 aa9.2□□□□□ -0.94
RAPGEF4-215ENST00000540783 CECR2Q9BXF3 1484 aa9.19□□□□□ -0.94
RAPGEF4-215ENST00000540783 BICRAQ9NZM4 1560 aa9.18□□□□□ -0.94
RAPGEF4-215ENST00000540783 BAZ1BQ9UIG0 1483 aaKnown RBP9.18□□□□□ -0.94
RAPGEF4-215ENST00000540783 EIF4G1Q04637 1599 aaKnown RBP9.15□□□□□ -0.94
RAPGEF4-215ENST00000540783 DNAJC5BQ9UF47 199 aa9.14□□□□□ -0.95
RAPGEF4-215ENST00000540783 LOC105371045A0A1W2PR82 267 aa9.11□□□□□ -0.95
RAPGEF4-215ENST00000540783 RSF1Q96T23 1441 aaPredicted RBP9.09□□□□□ -0.95
RAPGEF4-215ENST00000540783 ATAD2BQ9ULI0 1458 aa9.09□□□□□ -0.95
RAPGEF4-215ENST00000540783 UNC13AQ9UPW8 1703 aa9.08□□□□□ -0.96
RAPGEF4-215ENST00000540783 NCAPD3P42695 1498 aa9.08□□□□□ -0.96
RAPGEF4-215ENST00000540783 SMARCA4P51532 1647 aa9.08□□□□□ -0.96
RAPGEF4-215ENST00000540783 CC2D2AQ9P2K1 1620 aa9.05□□□□□ -0.96
RAPGEF4-215ENST00000540783 MROH2BQ7Z745 1585 aa9.04□□□□□ -0.96
RAPGEF4-215ENST00000540783 ERCC6Q03468 1493 aa9.03□□□□□ -0.96
RAPGEF4-215ENST00000540783 FAM9AQ8IZU1 332 aaPredicted RBP9.01□□□□□ -0.97
RAPGEF4-215ENST00000540783 PDS5BQ9NTI5 1447 aa9.01□□□□□ -0.97
RAPGEF4-215ENST00000540783 HMGXB3Q12766 1538 aa8.99□□□□□ -0.97
RAPGEF4-215ENST00000540783 TOP2AP11388 1531 aaKnown RBP8.96□□□□□ -0.98
RAPGEF4-215ENST00000540783 CADPSQ9ULU8 1353 aa8.95□□□□□ -0.98
RAPGEF4-215ENST00000540783 TRIM26Q12899 539 aaPredicted RBP8.95□□□□□ -0.98
RAPGEF4-215ENST00000540783 TRIM41Q8WV44 630 aa8.94□□□□□ -0.98
RAPGEF4-215ENST00000540783 SCAF1Q9H7N4 1312 aaKnown RBP8.89□□□□□ -0.99
RAPGEF4-215ENST00000540783 PEG3Q9GZU2 1588 aa8.89□□□□□ -0.99
RAPGEF4-215ENST00000540783 WIZO95785 1651 aa8.88□□□□□ -0.99
RAPGEF4-215ENST00000540783 EHMT2Q96KQ7 1210 aa8.88□□□□□ -0.99
RAPGEF4-215ENST00000540783 PELP1Q8IZL8 1130 aaKnown RBP8.86□□□□□ -0.99
RAPGEF4-215ENST00000540783 CCDC88BA6NC98 1476 aa8.85□□□□□ -0.99
RAPGEF4-215ENST00000540783 CEP164Q9UPV0 1460 aa8.84□□□□□ -0.99
RAPGEF4-215ENST00000540783 ABCC8Q09428 1581 aa8.83□□□□□ -1
RAPGEF4-215ENST00000540783 LAMC3Q9Y6N6 1575 aa8.81□□□□□ -1
RAPGEF4-215ENST00000540783 FANCD2Q9BXW9 1451 aa8.8□□□□□ -1
RAPGEF4-215ENST00000540783 ZEB1P37275 1124 aaPredicted RBP8.8□□□□□ -1
RAPGEF4-215ENST00000540783 CFTRP13569 1480 aa8.78□□□□□ -1
RAPGEF4-215ENST00000540783 FBLN2P98095 1184 aa8.76□□□□□ -1.01
RAPGEF4-215ENST00000540783 WRNQ14191 1432 aaPredicted RBP eCLIP8.76□□□□□ -1.01
RAPGEF4-215ENST00000540783 MRC2Q9UBG0 1479 aa8.74□□□□□ -1.01
RAPGEF4-215ENST00000540783 CUX2O14529 1486 aa8.73□□□□□ -1.01
RAPGEF4-215ENST00000540783 CHMP7Q8WUX9 453 aaPredicted RBP8.71□□□□□ -1.01
RAPGEF4-215ENST00000540783 NESP48681 1621 aa8.71□□□□□ -1.02
RAPGEF4-215ENST00000540783 UBTFP17480 764 aaKnown RBP8.7□□□□□ -1.02
RAPGEF4-215ENST00000540783 NEUROD1Q13562 356 aa8.69□□□□□ -1.02
RAPGEF4-215ENST00000540783 SOGA1O94964 1423 aa8.69□□□□□ -1.02
RAPGEF4-215ENST00000540783 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.68□□□□□ -1.02
RAPGEF4-215ENST00000540783 KIF27Q86VH2 1401 aa8.67□□□□□ -1.02
RAPGEF4-215ENST00000540783 ACIN1Q9UKV3 1341 aaKnown RBP8.66□□□□□ -1.02
RAPGEF4-215ENST00000540783 APLP2Q06481 763 aa8.66□□□□□ -1.02
RAPGEF4-215ENST00000540783 GTF3C3Q9Y5Q9 886 aa8.64□□□□□ -1.03
RAPGEF4-215ENST00000540783 IFT140Q96RY7 1462 aa8.64□□□□□ -1.03
RAPGEF4-215ENST00000540783 EEA1Q15075 1411 aa8.64□□□□□ -1.03
RAPGEF4-215ENST00000540783 CCER1Q8TC90 406 aaPredicted RBP8.63□□□□□ -1.03
RAPGEF4-215ENST00000540783 TTBK1Q5TCY1 1321 aaPredicted RBP8.63□□□□□ -1.03
RAPGEF4-215ENST00000540783 CSRNP3Q8WYN3 585 aa8.63□□□□□ -1.03
RAPGEF4-215ENST00000540783 DNMBPQ6XZF7 1577 aa8.6□□□□□ -1.03
RAPGEF4-215ENST00000540783 TOPBP1Q92547 1522 aa8.59□□□□□ -1.03
RAPGEF4-215ENST00000540783 OSCARQ8IYS5 282 aa8.59□□□□□ -1.03
RAPGEF4-215ENST00000540783 TDRD9Q8NDG6 1382 aaKnown RBP8.58□□□□□ -1.04
RAPGEF4-215ENST00000540783 NPM1P06748 294 aaKnown RBP eCLIP8.58□□□□□ -1.04
RAPGEF4-215ENST00000540783 DIEXFQ68CQ4 756 aaKnown RBP8.58□□□□□ -1.04
RAPGEF4-215ENST00000540783 FGD5Q6ZNL6 1462 aa8.57□□□□□ -1.04
RAPGEF4-215ENST00000540783 RANGAP1P46060 587 aaPredicted RBP8.57□□□□□ -1.04
RAPGEF4-215ENST00000540783 ATP1B4Q9UN42 357 aaPredicted RBP8.56□□□□□ -1.04
RAPGEF4-215ENST00000540783 CENPBP07199 599 aaPredicted RBP8.55□□□□□ -1.04
RAPGEF4-215ENST00000540783 YTHDC1Q96MU7 727 aaKnown RBP8.54□□□□□ -1.04
RAPGEF4-215ENST00000540783 GRIN2BQ13224 1484 aa8.54□□□□□ -1.04
RAPGEF4-215ENST00000540783 GAPVD1Q14C86 1478 aa8.53□□□□□ -1.04
RAPGEF4-215ENST00000540783 HNRNPUL2Q1KMD3 747 aaKnown RBP8.53□□□□□ -1.04
RAPGEF4-215ENST00000540783 CARMIL1Q5VZK9 1371 aa8.52□□□□□ -1.04
RAPGEF4-215ENST00000540783 POLA1P09884 1462 aaPredicted RBP8.52□□□□□ -1.05
RAPGEF4-215ENST00000540783 URB2Q14146 1524 aaKnown RBP8.52□□□□□ -1.05
RAPGEF4-215ENST00000540783 WDR62O43379 1518 aa8.51□□□□□ -1.05
RAPGEF4-215ENST00000540783 RAD54L2Q9Y4B4 1467 aa8.49□□□□□ -1.05
RAPGEF4-215ENST00000540783 CUX1P39880 1505 aa8.48□□□□□ -1.05
RAPGEF4-215ENST00000540783 CARMIL2Q6F5E8 1435 aa8.48□□□□□ -1.05
RAPGEF4-215ENST00000540783 FHAD1B1AJZ9 1412 aa8.47□□□□□ -1.05
RAPGEF4-215ENST00000540783 AQRO60306 1485 aaKnown RBP eCLIP8.47□□□□□ -1.05
RAPGEF4-215ENST00000540783 CDK11AQ9UQ88 783 aaPredicted RBP8.47□□□□□ -1.05
RAPGEF4-215ENST00000540783 TOP2BQ02880 1626 aa8.47□□□□□ -1.05
RAPGEF4-215ENST00000540783 ABCA10Q8WWZ4 1543 aa8.46□□□□□ -1.05
RAPGEF4-215ENST00000540783 KIF21AQ7Z4S6 1674 aa8.46□□□□□ -1.06
RAPGEF4-215ENST00000540783 MAGI1Q96QZ7 1491 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms