RNA–Protein interactions for RNA: ENST00000539455.5

CELF1-220, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 5

Gene CELF1, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-220ENST00000539455 SPATA31D1Q6ZQQ2 1576 aa10.07□□□□□ -0.8
CELF1-220ENST00000539455 CEP170Q5SW79 1584 aa10.06□□□□□ -0.8
CELF1-220ENST00000539455 PRDM2Q13029 1718 aa10.06□□□□□ -0.8
CELF1-220ENST00000539455 MAPKBP1O60336 1514 aa10.06□□□□□ -0.8
CELF1-220ENST00000539455 MSH5O43196 834 aa10.04□□□□□ -0.8
CELF1-220ENST00000539455 WDR97A6NE52 1622 aa10.04□□□□□ -0.8
CELF1-220ENST00000539455 NPM1P06748 294 aaKnown RBP eCLIP10.01□□□□□ -0.81
CELF1-220ENST00000539455 TOP2AP11388 1531 aaKnown RBP10.01□□□□□ -0.81
CELF1-220ENST00000539455 CERKQ8TCT0 537 aa9.97□□□□□ -0.81
CELF1-220ENST00000539455 NUP160Q12769 1436 aa9.97□□□□□ -0.81
CELF1-220ENST00000539455 COL17A1Q9UMD9 1497 aaPredicted RBP9.97□□□□□ -0.81
CELF1-220ENST00000539455 SHROOM2Q13796 1616 aa9.96□□□□□ -0.81
CELF1-220ENST00000539455 GRIN2AQ12879 1464 aa9.95□□□□□ -0.82
CELF1-220ENST00000539455 FGD5Q6ZNL6 1462 aa9.95□□□□□ -0.82
CELF1-220ENST00000539455 TOP2BQ02880 1626 aa9.95□□□□□ -0.82
CELF1-220ENST00000539455 PRG4Q92954 1404 aaPredicted RBP9.94□□□□□ -0.82
CELF1-220ENST00000539455 CCDC88BA6NC98 1476 aa9.93□□□□□ -0.82
CELF1-220ENST00000539455 ADCY10Q96PN6 1610 aa9.9□□□□□ -0.82
CELF1-220ENST00000539455 PBRM1Q86U86 1689 aa9.89□□□□□ -0.83
CELF1-220ENST00000539455 PPRC1Q5VV67 1664 aaKnown RBP9.88□□□□□ -0.83
CELF1-220ENST00000539455 PCF11O94913 1555 aaKnown RBP9.86□□□□□ -0.83
CELF1-220ENST00000539455 JPH4Q96JJ6 628 aa9.85□□□□□ -0.83
CELF1-220ENST00000539455 HSPA2P54652 639 aa9.84□□□□□ -0.83
CELF1-220ENST00000539455 PPP4R3CPQ6ZMV5 832 aa9.84□□□□□ -0.83
CELF1-220ENST00000539455 PTPRMP28827 1452 aa9.84□□□□□ -0.83
CELF1-220ENST00000539455 GLI2P10070 1586 aa9.82□□□□□ -0.84
CELF1-220ENST00000539455 ABCA5Q8WWZ7 1642 aa9.82□□□□□ -0.84
CELF1-220ENST00000539455 ADAMTS12P58397 1594 aa9.81□□□□□ -0.84
CELF1-220ENST00000539455 CUX1P39880 1505 aa9.81□□□□□ -0.84
CELF1-220ENST00000539455 ABCA10Q8WWZ4 1543 aa9.78□□□□□ -0.84
CELF1-220ENST00000539455 ASXL2Q76L83 1435 aa9.78□□□□□ -0.84
CELF1-220ENST00000539455 FHAD1B1AJZ9 1412 aa9.77□□□□□ -0.85
CELF1-220ENST00000539455 KIF21BO75037 1637 aa9.77□□□□□ -0.85
CELF1-220ENST00000539455 PLB1Q6P1J6 1458 aa9.77□□□□□ -0.85
CELF1-220ENST00000539455 TEX14Q8IWB6 1497 aa9.77□□□□□ -0.85
CELF1-220ENST00000539455 KCNA4P22459 653 aa9.73□□□□□ -0.85
CELF1-220ENST00000539455 ABCC2Q92887 1545 aa9.72□□□□□ -0.85
CELF1-220ENST00000539455 TTBK1Q5TCY1 1321 aaPredicted RBP9.72□□□□□ -0.85
CELF1-220ENST00000539455 EPRSP07814 1512 aaKnown RBP9.72□□□□□ -0.85
CELF1-220ENST00000539455 MAP3K4Q9Y6R4 1608 aa9.71□□□□□ -0.85
CELF1-220ENST00000539455 ADAMTSL3P82987 1691 aa9.71□□□□□ -0.85
CELF1-220ENST00000539455 SCAF1Q9H7N4 1312 aaKnown RBP9.71□□□□□ -0.86
CELF1-220ENST00000539455 RUSC2Q8N2Y8 1516 aa9.7□□□□□ -0.86
CELF1-220ENST00000539455 KIAA0586Q9BVV6 1533 aa9.66□□□□□ -0.86
CELF1-220ENST00000539455 PTPRGP23470 1445 aa9.66□□□□□ -0.86
CELF1-220ENST00000539455 NCBP3Q53F19 620 aaKnown RBP9.65□□□□□ -0.86
CELF1-220ENST00000539455 MADDQ8WXG6 1647 aa9.64□□□□□ -0.87
CELF1-220ENST00000539455 ERICH3Q5RHP9 1530 aa9.62□□□□□ -0.87
CELF1-220ENST00000539455 MED1Q15648 1581 aaPredicted RBP9.62□□□□□ -0.87
CELF1-220ENST00000539455 MAGI3Q5TCQ9 1506 aa9.6□□□□□ -0.87
CELF1-220ENST00000539455 UHRF1BP1LA0JNW5 1464 aa9.59□□□□□ -0.87
CELF1-220ENST00000539455 CUL7Q14999 1698 aa9.59□□□□□ -0.87
CELF1-220ENST00000539455 BCORL1Q5H9F3 1711 aa9.59□□□□□ -0.87
CELF1-220ENST00000539455 RIMS1Q86UR5 1692 aaKnown RBP9.58□□□□□ -0.88
CELF1-220ENST00000539455 YEATS2Q9ULM3 1422 aa9.58□□□□□ -0.88
CELF1-220ENST00000539455 DMRT2Q9Y5R5 561 aa9.58□□□□□ -0.88
CELF1-220ENST00000539455 TNIKQ9UKE5 1360 aa9.58□□□□□ -0.88
CELF1-220ENST00000539455 ARID4BQ4LE39 1312 aaPredicted RBP9.57□□□□□ -0.88
CELF1-220ENST00000539455 WRNQ14191 1432 aaPredicted RBP eCLIP9.57□□□□□ -0.88
CELF1-220ENST00000539455 CD109Q6YHK3 1445 aa9.57□□□□□ -0.88
CELF1-220ENST00000539455 IQSEC2Q5JU85 1478 aa9.57□□□□□ -0.88
CELF1-220ENST00000539455 KDM5BQ9UGL1 1544 aa9.56□□□□□ -0.88
CELF1-220ENST00000539455 SUPT5HO00267 1087 aaKnown RBP9.56□□□□□ -0.88
CELF1-220ENST00000539455 CNKSR2Q8WXI2 1034 aa9.56□□□□□ -0.88
CELF1-220ENST00000539455 UACAQ9BZF9 1416 aa9.56□□□□□ -0.88
CELF1-220ENST00000539455 LTBP4Q8N2S1 1624 aa9.55□□□□□ -0.88
CELF1-220ENST00000539455 ARAP3Q8WWN8 1544 aa9.54□□□□□ -0.88
CELF1-220ENST00000539455 WDR7Q9Y4E6 1490 aa9.53□□□□□ -0.88
CELF1-220ENST00000539455 UBAP1LF5GYI3 381 aa9.52□□□□□ -0.89
CELF1-220ENST00000539455 PTPRTO14522 1441 aa9.51□□□□□ -0.89
CELF1-220ENST00000539455 STRCQ7RTU9 1775 aa9.51□□□□□ -0.89
CELF1-220ENST00000539455 MAPK8IP2Q13387 824 aaPredicted RBP9.51□□□□□ -0.89
CELF1-220ENST00000539455 HSPA1LP34931 641 aa9.5□□□□□ -0.89
CELF1-220ENST00000539455 ZCCHC11Q5TAX3 1644 aaKnown RBP9.49□□□□□ -0.89
CELF1-220ENST00000539455 CARMIL2Q6F5E8 1435 aa9.49□□□□□ -0.89
CELF1-220ENST00000539455 RAPGEF3O95398 923 aa9.49□□□□□ -0.89
CELF1-220ENST00000539455 NPM3O75607 178 aaKnown RBP9.47□□□□□ -0.89
CELF1-220ENST00000539455 KCNH8Q96L42 1107 aa9.47□□□□□ -0.89
CELF1-220ENST00000539455 CFAP43Q8NDM7 1665 aa9.47□□□□□ -0.89
CELF1-220ENST00000539455 CEBPAP49715 358 aaPredicted RBP9.42□□□□□ -0.9
CELF1-220ENST00000539455 PIP4K2BP78356 416 aa9.42□□□□□ -0.9
CELF1-220ENST00000539455 MLECQ14165 292 aa9.42□□□□□ -0.9
CELF1-220ENST00000539455 RGS17Q9UGC6 210 aaPredicted RBP9.42□□□□□ -0.9
CELF1-220ENST00000539455 FRMPD1Q5SYB0 1578 aa9.41□□□□□ -0.9
CELF1-220ENST00000539455 POGZQ7Z3K3 1410 aa9.41□□□□□ -0.9
CELF1-220ENST00000539455 PHLDB1Q86UU1 1377 aa9.41□□□□□ -0.9
CELF1-220ENST00000539455 PREX1Q8TCU6 1659 aa9.41□□□□□ -0.9
CELF1-220ENST00000539455 TTC37Q6PGP7 1564 aa9.41□□□□□ -0.9
CELF1-220ENST00000539455 ARHGEF40Q8TER5 1519 aa9.41□□□□□ -0.9
CELF1-220ENST00000539455 UHRF1BP1Q6BDS2 1440 aa9.4□□□□□ -0.9
CELF1-220ENST00000539455 DISP1Q96F81 1524 aa9.4□□□□□ -0.91
CELF1-220ENST00000539455 FANCAO15360 1455 aa9.39□□□□□ -0.91
CELF1-220ENST00000539455 ZNF335Q9H4Z2 1342 aaPredicted RBP9.38□□□□□ -0.91
CELF1-220ENST00000539455 SRCAPQ6ZRS2 3230 aa9.38□□□□□ -0.91
CELF1-220ENST00000539455 SIGLEC1Q9BZZ2 1709 aa9.38□□□□□ -0.91
CELF1-220ENST00000539455 BIVM-ERCC5R4GMW8 1640 aa9.36□□□□□ -0.91
CELF1-220ENST00000539455 SETD1AO15047 1707 aaKnown RBP9.35□□□□□ -0.91
CELF1-220ENST00000539455 AKNAQ7Z591 1439 aa9.35□□□□□ -0.91
CELF1-220ENST00000539455 IGF1RP08069 1367 aa9.35□□□□□ -0.91
CELF1-220ENST00000539455 NEO1Q92859 1461 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms