RNA–Protein interactions for RNA: ENST00000535535.5

LMO3-212, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMO3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-212ENST00000535535 NUBP1P53384 320 aa18.37■□□□□ 0.53
LMO3-212ENST00000535535 VASPP50552 380 aaPredicted RBP18.36■□□□□ 0.53
LMO3-212ENST00000535535 DCBLD2Q96PD2 775 aa18.33■□□□□ 0.52
LMO3-212ENST00000535535 MS4A3Q96HJ5 214 aa18.31■□□□□ 0.52
LMO3-212ENST00000535535 KIF12Q96FN5 646 aa18.26■□□□□ 0.51
LMO3-212ENST00000535535 NISCHQ9Y2I1 1504 aa18.23■□□□□ 0.51
LMO3-212ENST00000535535 FAM212AQ96EL1 285 aa18.19■□□□□ 0.5
LMO3-212ENST00000535535 MAP3K13O43283 966 aa18.16■□□□□ 0.5
LMO3-212ENST00000535535 KLHL34Q8N239 644 aa18.12■□□□□ 0.49
LMO3-212ENST00000535535 LHX8Q68G74 356 aa18.1■□□□□ 0.49
LMO3-212ENST00000535535 ASTLQ6HA08 431 aaPredicted RBP18.1■□□□□ 0.49
LMO3-212ENST00000535535 ATMINO43313 823 aaPredicted RBP18.07■□□□□ 0.48
LMO3-212ENST00000535535 IFNLR1Q8IU57 520 aaPredicted RBP18.06■□□□□ 0.48
LMO3-212ENST00000535535 PELP1Q8IZL8 1130 aaKnown RBP18.06■□□□□ 0.48
LMO3-212ENST00000535535 TRPC6Q9Y210 931 aa18.06■□□□□ 0.48
LMO3-212ENST00000535535 SGIP1Q9BQI5 828 aa18.04■□□□□ 0.48
LMO3-212ENST00000535535 DCAF8Q5TAQ9 597 aa18.02■□□□□ 0.48
LMO3-212ENST00000535535 PCDHB13Q9Y5F0 798 aa18.01■□□□□ 0.47
LMO3-212ENST00000535535 BMP2KQ9NSY1 1161 aaPredicted RBP18■□□□□ 0.47
LMO3-212ENST00000535535 TIE1P35590 1138 aa17.97■□□□□ 0.47
LMO3-212ENST00000535535 ATN1P54259 1190 aaPredicted RBP17.96■□□□□ 0.47
LMO3-212ENST00000535535 IFNL1Q8IU54 200 aa17.95■□□□□ 0.46
LMO3-212ENST00000535535 PYGBP11216 843 aa17.93■□□□□ 0.46
LMO3-212ENST00000535535 GSE1Q14687 1217 aa17.93■□□□□ 0.46
LMO3-212ENST00000535535 SPOCK2Q92563 424 aa17.93■□□□□ 0.46
LMO3-212ENST00000535535 SLC39A7Q92504 469 aa17.9■□□□□ 0.46
LMO3-212ENST00000535535 METRNQ9UJH8 293 aa17.89■□□□□ 0.45
LMO3-212ENST00000535535 TTLL13PA6NNM8 815 aa17.88■□□□□ 0.45
LMO3-212ENST00000535535 C7P10643 843 aa17.86■□□□□ 0.45
LMO3-212ENST00000535535 POTEB2H3BUK9 544 aa17.84■□□□□ 0.45
LMO3-212ENST00000535535 CHRM1P11229 460 aaPredicted RBP17.77■□□□□ 0.44
LMO3-212ENST00000535535 PCDHB8Q9UN66 801 aa17.76■□□□□ 0.43
LMO3-212ENST00000535535 TMEM106CQ9BVX2 250 aa17.75■□□□□ 0.43
LMO3-212ENST00000535535 TRIM35Q9UPQ4 493 aa17.75■□□□□ 0.43
LMO3-212ENST00000535535 CIZ1Q9ULV3 898 aaPredicted RBP17.73■□□□□ 0.43
LMO3-212ENST00000535535 POTEFA5A3E0 1075 aa17.72■□□□□ 0.43
LMO3-212ENST00000535535 ZNF467Q7Z7K2 595 aaPredicted RBP17.69■□□□□ 0.42
LMO3-212ENST00000535535 OTUD5Q96G74 571 aa17.69■□□□□ 0.42
LMO3-212ENST00000535535 IER5LQ5T953 404 aa17.68■□□□□ 0.42
LMO3-212ENST00000535535 POTEJP0CG39 1038 aa17.66■□□□□ 0.42
LMO3-212ENST00000535535 COLQQ9Y215 455 aaPredicted RBP17.64■□□□□ 0.41
LMO3-212ENST00000535535 SEC24BO95487 1268 aa17.57■□□□□ 0.4
LMO3-212ENST00000535535 TRIM41Q8WV44 630 aa17.55■□□□□ 0.4
LMO3-212ENST00000535535 PSEN1P49768 467 aa17.53■□□□□ 0.4
LMO3-212ENST00000535535 IRX5P78411 483 aaPredicted RBP17.51■□□□□ 0.39
LMO3-212ENST00000535535 MAMSTRQ6ZN01 415 aa17.5■□□□□ 0.39
LMO3-212ENST00000535535 PDAP1Q13442 181 aaKnown RBP17.5■□□□□ 0.39
LMO3-212ENST00000535535 PLCG2P16885 1265 aa17.46■□□□□ 0.39
LMO3-212ENST00000535535 SCUBE2Q9NQ36 999 aa17.44■□□□□ 0.38
LMO3-212ENST00000535535 OCEL1Q9H607 264 aa17.41■□□□□ 0.38
LMO3-212ENST00000535535 RNF25Q96BH1 459 aaPredicted RBP17.38■□□□□ 0.37
LMO3-212ENST00000535535 GOLGA2Q08379 1002 aa17.37■□□□□ 0.37
LMO3-212ENST00000535535 MKRN3Q13064 507 aaKnown RBP17.35■□□□□ 0.37
LMO3-212ENST00000535535 PDCD7Q8N8D1 485 aaKnown RBP17.33■□□□□ 0.37
LMO3-212ENST00000535535 RIOK3O14730 519 aaKnown RBP17.31■□□□□ 0.36
LMO3-212ENST00000535535 CABP2Q9NPB3 220 aa17.31■□□□□ 0.36
LMO3-212ENST00000535535 ILDR1Q86SU0 546 aaPredicted RBP17.28■□□□□ 0.36
LMO3-212ENST00000535535 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.26■□□□□ 0.35
LMO3-212ENST00000535535 VGFO15240 615 aaPredicted RBP17.22■□□□□ 0.35
LMO3-212ENST00000535535 PKD2Q13563 968 aa17.2■□□□□ 0.34
LMO3-212ENST00000535535 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.19■□□□□ 0.34
LMO3-212ENST00000535535 ZFP91Q96JP5 570 aaPredicted RBP17.19■□□□□ 0.34
LMO3-212ENST00000535535 ECM2O94769 699 aaPredicted RBP17.17■□□□□ 0.34
LMO3-212ENST00000535535 EFCAB3Q8N7B9 438 aa17.16■□□□□ 0.34
LMO3-212ENST00000535535 SLAIN1Q8ND83 568 aa17.15■□□□□ 0.34
LMO3-212ENST00000535535 LCE2DQ5TA82 110 aaPredicted RBP17.12■□□□□ 0.33
LMO3-212ENST00000535535 DPY19L2Q6NUT2 758 aa17.12■□□□□ 0.33
LMO3-212ENST00000535535 L3MBTL3Q96JM7 780 aaPredicted RBP17.12■□□□□ 0.33
LMO3-212ENST00000535535 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.09■□□□□ 0.33
LMO3-212ENST00000535535 RGL2O15211 777 aa17.06■□□□□ 0.32
LMO3-212ENST00000535535 TAOK2Q9UL54 1235 aa17.05■□□□□ 0.32
LMO3-212ENST00000535535 C3orf67Q6ZVT6 689 aa17.05■□□□□ 0.32
LMO3-212ENST00000535535 FAM163AQ96GL9 167 aaPredicted RBP17.03■□□□□ 0.32
LMO3-212ENST00000535535 POTEMA6NI47 508 aa17.02■□□□□ 0.32
LMO3-212ENST00000535535 BCL11BQ9C0K0 894 aaPredicted RBP17.02■□□□□ 0.32
LMO3-212ENST00000535535 SOX12O15370 315 aa17■□□□□ 0.31
LMO3-212ENST00000535535 POTEGQ6S5H5 508 aa17■□□□□ 0.31
LMO3-212ENST00000535535 BOLA1Q9Y3E2 137 aa16.99■□□□□ 0.31
LMO3-212ENST00000535535 MS4A4AQ96JQ5 239 aa16.96■□□□□ 0.31
LMO3-212ENST00000535535 STK24Q9Y6E0 443 aa16.96■□□□□ 0.31
LMO3-212ENST00000535535 PHF8Q9UPP1 1060 aa16.95■□□□□ 0.3
LMO3-212ENST00000535535 STK25O00506 426 aa16.94■□□□□ 0.3
LMO3-212ENST00000535535 TMEM121BQ9BXQ6 578 aaPredicted RBP16.93■□□□□ 0.3
LMO3-212ENST00000535535 G3V3G9 751 aa16.92■□□□□ 0.3
LMO3-212ENST00000535535 ST18O60284 1047 aa16.87■□□□□ 0.29
LMO3-212ENST00000535535 FBXO22Q8NEZ5 403 aa16.87■□□□□ 0.29
LMO3-212ENST00000535535 MICALL2Q8IY33 904 aa16.86■□□□□ 0.29
LMO3-212ENST00000535535 MFRPQ9BY79 579 aa16.85■□□□□ 0.29
LMO3-212ENST00000535535 SNPHO15079 494 aa16.84■□□□□ 0.29
LMO3-212ENST00000535535 NLRP6P59044 892 aa16.84■□□□□ 0.29
LMO3-212ENST00000535535 ABCC9O60706 1549 aa16.78■□□□□ 0.28
LMO3-212ENST00000535535 TMEM92Q6UXU6 159 aa16.73■□□□□ 0.27
LMO3-212ENST00000535535 HS6ST3Q8IZP7 471 aa16.72■□□□□ 0.27
LMO3-212ENST00000535535 PCDH10Q9P2E7 1040 aa16.72■□□□□ 0.27
LMO3-212ENST00000535535 HOXB3P14651 431 aaPredicted RBP16.67■□□□□ 0.26
LMO3-212ENST00000535535 MARVELD3Q96A59 401 aa16.63■□□□□ 0.25
LMO3-212ENST00000535535 CHGAP10645 457 aaKnown RBP16.61■□□□□ 0.25
LMO3-212ENST00000535535 CCDC180Q9P1Z9 1646 aa16.6■□□□□ 0.25
LMO3-212ENST00000535535 CDAN1Q8IWY9 1227 aa16.57■□□□□ 0.24
LMO3-212ENST00000535535 DOK7Q18PE1 504 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms