RNA–Protein interactions for RNA: ENST00000535535.5

LMO3-212, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMO3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-212ENST00000535535 AEBP2Q6ZN18 517 aaPredicted RBP36.97■■■■□ 3.51
LMO3-212ENST00000535535 CHIC1Q5VXU3 224 aa35.42■■■■□ 3.26
LMO3-212ENST00000535535 SENP3Q9H4L4 574 aaPredicted RBP31.44■■■□□ 2.62
LMO3-212ENST00000535535 PHF23Q9BUL5 403 aaPredicted RBP31.1■■■□□ 2.57
LMO3-212ENST00000535535 FOXD1Q16676 465 aa29.26■■■□□ 2.27
LMO3-212ENST00000535535 PLPPR3Q6T4P5 718 aa28.44■■■□□ 2.14
LMO3-212ENST00000535535 PPP6R1Q9UPN7 881 aa27.64■■■□□ 2.02
LMO3-212ENST00000535535 ADRA2BP18089 450 aa27.55■■■□□ 2
LMO3-212ENST00000535535 PIAS4Q8N2W9 510 aaPredicted RBP27.41■■□□□ 1.98
LMO3-212ENST00000535535 MSH5O43196 834 aa27.24■■□□□ 1.95
LMO3-212ENST00000535535 POTEDQ86YR6 584 aa25.99■■□□□ 1.75
LMO3-212ENST00000535535 MAPK8IP2Q13387 824 aaPredicted RBP25.2■■□□□ 1.62
LMO3-212ENST00000535535 SCAF1Q9H7N4 1312 aaKnown RBP25.15■■□□□ 1.62
LMO3-212ENST00000535535 DMRT2Q9Y5R5 561 aa25.01■■□□□ 1.59
LMO3-212ENST00000535535 PPP4R3CPQ6ZMV5 832 aa24.96■■□□□ 1.59
LMO3-212ENST00000535535 CNKSR2Q8WXI2 1034 aa24.42■■□□□ 1.5
LMO3-212ENST00000535535 HOXD11P31277 338 aaPredicted RBP24.23■■□□□ 1.47
LMO3-212ENST00000535535 RNF216Q9NWF9 866 aaPredicted RBP24.13■■□□□ 1.45
LMO3-212ENST00000535535 NCBP3Q53F19 620 aaKnown RBP24.08■■□□□ 1.45
LMO3-212ENST00000535535 DCAF8L1A6NGE4 600 aa23.87■■□□□ 1.41
LMO3-212ENST00000535535 NPM3O75607 178 aaKnown RBP23.8■■□□□ 1.4
LMO3-212ENST00000535535 KCNA4P22459 653 aa23.66■■□□□ 1.38
LMO3-212ENST00000535535 DNAJC5BQ9UF47 199 aa23.34■■□□□ 1.33
LMO3-212ENST00000535535 RNF39Q9H2S5 420 aa23.3■■□□□ 1.32
LMO3-212ENST00000535535 CACNB1Q02641 598 aaPredicted RBP23.11■■□□□ 1.29
LMO3-212ENST00000535535 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.02■■□□□ 1.28
LMO3-212ENST00000535535 C1QBPQ07021 282 aaKnown RBP22.95■■□□□ 1.26
LMO3-212ENST00000535535 SLC4A2P04920 1241 aa22.65■■□□□ 1.22
LMO3-212ENST00000535535 U3KPZ7 1027 aaPredicted RBP22.64■■□□□ 1.21
LMO3-212ENST00000535535 SLC4A1APQ9BWU0 796 aaKnown RBP22.37■■□□□ 1.17
LMO3-212ENST00000535535 SPINK5Q9NQ38 1064 aaPredicted RBP22.19■■□□□ 1.14
LMO3-212ENST00000535535 CAPN15O75808 1086 aa22.09■■□□□ 1.13
LMO3-212ENST00000535535 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.07■■□□□ 1.12
LMO3-212ENST00000535535 HNRNPUL2Q1KMD3 747 aaKnown RBP22.07■■□□□ 1.12
LMO3-212ENST00000535535 MYCNP04198 464 aaPredicted RBP21.99■■□□□ 1.11
LMO3-212ENST00000535535 APLP2Q06481 763 aa21.98■■□□□ 1.11
LMO3-212ENST00000535535 SAMD1Q6SPF0 538 aaPredicted RBP21.97■■□□□ 1.11
LMO3-212ENST00000535535 FOXD4L1Q9NU39 408 aa21.96■■□□□ 1.11
LMO3-212ENST00000535535 DSG3P32926 999 aa21.93■■□□□ 1.1
LMO3-212ENST00000535535 ZNF219Q9P2Y4 722 aaPredicted RBP21.83■■□□□ 1.08
LMO3-212ENST00000535535 TRHP20396 242 aaPredicted RBP21.82■■□□□ 1.08
LMO3-212ENST00000535535 ZBTB22O15209 634 aa21.8■■□□□ 1.08
LMO3-212ENST00000535535 ABCB7O75027 752 aa21.63■■□□□ 1.05
LMO3-212ENST00000535535 ATF5Q9Y2D1 282 aaPredicted RBP21.47■■□□□ 1.03
LMO3-212ENST00000535535 POLA2Q14181 598 aa21.32■■□□□ 1
LMO3-212ENST00000535535 ATXN8OSP0DMR3 200 aa21.25■□□□□ 0.99
LMO3-212ENST00000535535 CSRNP3Q8WYN3 585 aa21.07■□□□□ 0.96
LMO3-212ENST00000535535 EHMT2Q96KQ7 1210 aa20.96■□□□□ 0.95
LMO3-212ENST00000535535 ZBTB12Q9Y330 459 aaPredicted RBP20.94■□□□□ 0.94
LMO3-212ENST00000535535 RBM42Q9BTD8 480 aaKnown RBP20.88■□□□□ 0.93
LMO3-212ENST00000535535 OSCARQ8IYS5 282 aa20.68■□□□□ 0.9
LMO3-212ENST00000535535 FBLN2P98095 1184 aa20.55■□□□□ 0.88
LMO3-212ENST00000535535 MKRN4PQ13434 485 aaPredicted RBP20.52■□□□□ 0.88
LMO3-212ENST00000535535 AKT1S1Q96B36 256 aa20.5■□□□□ 0.87
LMO3-212ENST00000535535 POTEHQ6S545 545 aa20.43■□□□□ 0.86
LMO3-212ENST00000535535 SPDYE2BA6NHP3 402 aa20.33■□□□□ 0.85
LMO3-212ENST00000535535 SPDYE6P0CI01 402 aa20.33■□□□□ 0.85
LMO3-212ENST00000535535 SPDYE2Q495Y8 402 aa20.33■□□□□ 0.85
LMO3-212ENST00000535535 CHRDL2Q6WN34 429 aa20.3■□□□□ 0.84
LMO3-212ENST00000535535 REM2Q8IYK8 340 aaPredicted RBP20.3■□□□□ 0.84
LMO3-212ENST00000535535 SSUH2Q9Y2M2 353 aa20.15■□□□□ 0.82
LMO3-212ENST00000535535 ZNF692Q9BU19 519 aaPredicted RBP20.11■□□□□ 0.81
LMO3-212ENST00000535535 PITPNM1O00562 1244 aa20.1■□□□□ 0.81
LMO3-212ENST00000535535 PIP4P2Q8N4L2 257 aa19.91■□□□□ 0.78
LMO3-212ENST00000535535 SPDYE1Q8NFV5 336 aaPredicted RBP19.87■□□□□ 0.77
LMO3-212ENST00000535535 FXR2P51116 673 aaKnown RBP eCLIP19.86■□□□□ 0.77
LMO3-212ENST00000535535 PABPN1Q86U42 306 aaKnown RBP eCLIP19.85■□□□□ 0.77
LMO3-212ENST00000535535 CLEC11AQ9Y240 323 aa19.78■□□□□ 0.76
LMO3-212ENST00000535535 SPDYE4A6NLX3 237 aa19.68■□□□□ 0.74
LMO3-212ENST00000535535 PRKAR2AP13861 404 aaKnown RBP19.55■□□□□ 0.72
LMO3-212ENST00000535535 PRR29P0C7W0 189 aa19.51■□□□□ 0.71
LMO3-212ENST00000535535 CHADLQ6NUI6 762 aa19.41■□□□□ 0.7
LMO3-212ENST00000535535 HAX1O00165 279 aa19.38■□□□□ 0.69
LMO3-212ENST00000535535 STAG3Q9UJ98 1225 aa19.35■□□□□ 0.69
LMO3-212ENST00000535535 PROM2Q8N271 834 aa19.35■□□□□ 0.69
LMO3-212ENST00000535535 SP7Q8TDD2 431 aaPredicted RBP19.33■□□□□ 0.68
LMO3-212ENST00000535535 EVX2Q03828 476 aa19.23■□□□□ 0.67
LMO3-212ENST00000535535 C19orf67A6NJJ6 358 aa19.21■□□□□ 0.67
LMO3-212ENST00000535535 CREBZFQ9NS37 354 aa19.18■□□□□ 0.66
LMO3-212ENST00000535535 FARP1Q9Y4F1 1045 aaPredicted RBP19.16■□□□□ 0.66
LMO3-212ENST00000535535 FKBP8Q14318 412 aa19.06■□□□□ 0.64
LMO3-212ENST00000535535 CD44P16070 742 aaKnown RBP18.96■□□□□ 0.63
LMO3-212ENST00000535535 MNX1P50219 401 aaPredicted RBP18.92■□□□□ 0.62
LMO3-212ENST00000535535 GABBR2O75899 941 aa18.8■□□□□ 0.6
LMO3-212ENST00000535535 NPM1P06748 294 aaKnown RBP eCLIP18.77■□□□□ 0.6
LMO3-212ENST00000535535 ZNF579Q8NAF0 562 aaKnown RBP18.72■□□□□ 0.59
LMO3-212ENST00000535535 ZRANB1Q9UGI0 708 aa18.72■□□□□ 0.59
LMO3-212ENST00000535535 MIER1Q8N108 512 aa18.68■□□□□ 0.58
LMO3-212ENST00000535535 PAK3O75914 559 aaPredicted RBP18.63■□□□□ 0.57
LMO3-212ENST00000535535 PLEKHG5O94827 1062 aa18.62■□□□□ 0.57
LMO3-212ENST00000535535 CLCN6P51797 869 aa18.62■□□□□ 0.57
LMO3-212ENST00000535535 PLCD3Q8N3E9 789 aa18.59■□□□□ 0.57
LMO3-212ENST00000535535 FBXO3Q9UK99 471 aa18.54■□□□□ 0.56
LMO3-212ENST00000535535 PHF12Q96QT6 1004 aa18.53■□□□□ 0.56
LMO3-212ENST00000535535 POTEIP0CG38 1075 aa18.46■□□□□ 0.54
LMO3-212ENST00000535535 TSPYL2Q9H2G4 693 aaPredicted RBP18.46■□□□□ 0.54
LMO3-212ENST00000535535 GALR2O43603 387 aaPredicted RBP18.45■□□□□ 0.54
LMO3-212ENST00000535535 RASEFQ8IZ41 740 aa18.44■□□□□ 0.54
LMO3-212ENST00000535535 ZBTB47Q9UFB7 747 aaPredicted RBP18.44■□□□□ 0.54
LMO3-212ENST00000535535 CCDC61Q9Y6R9 512 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms