RNA–Protein interactions for RNA: ENST00000535325.5

FYCO1-205, Transcript of FYVE and coiled-coil domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene FYCO1, Length 8,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1-205ENST00000535325 TSPY4P0CV99 314 aa20.67■□□□□ 0.9
FYCO1-205ENST00000535325 TSPY10P0CW01 314 aa20.67■□□□□ 0.9
FYCO1-205ENST00000535325 WRNQ14191 1432 aaPredicted RBP eCLIP20.66■□□□□ 0.9
FYCO1-205ENST00000535325 MYO15BQ96JP2 1530 aa20.65■□□□□ 0.9
FYCO1-205ENST00000535325 STAG3Q9UJ98 1225 aa20.61■□□□□ 0.89
FYCO1-205ENST00000535325 TRIM44Q96DX7 344 aaPredicted RBP20.59■□□□□ 0.89
FYCO1-205ENST00000535325 SCAF1Q9H7N4 1312 aaKnown RBP20.58■□□□□ 0.89
FYCO1-205ENST00000535325 SMARCA2P51531 1590 aa20.57■□□□□ 0.88
FYCO1-205ENST00000535325 CHMP4BQ9H444 224 aaKnown RBP20.57■□□□□ 0.88
FYCO1-205ENST00000535325 CASC1Q6TDU7 716 aa20.57■□□□□ 0.88
FYCO1-205ENST00000535325 NPM1P06748 294 aaKnown RBP eCLIP20.56■□□□□ 0.88
FYCO1-205ENST00000535325 NBR1Q14596 966 aa20.55■□□□□ 0.88
FYCO1-205ENST00000535325 TNNT2P45379 298 aaPredicted RBP20.55■□□□□ 0.88
FYCO1-205ENST00000535325 NCLP19338 710 aaKnown RBP20.55■□□□□ 0.88
FYCO1-205ENST00000535325 PPM1GO15355 546 aaPredicted RBP20.54■□□□□ 0.88
FYCO1-205ENST00000535325 TIMELESSQ9UNS1 1208 aa20.53■□□□□ 0.88
FYCO1-205ENST00000535325 MIER1Q8N108 512 aa20.52■□□□□ 0.88
FYCO1-205ENST00000535325 ERICH6BQ5W0A0 696 aa20.49■□□□□ 0.87
FYCO1-205ENST00000535325 BCL11AQ9H165 835 aa20.48■□□□□ 0.87
FYCO1-205ENST00000535325 MS4A1P11836 297 aa20.46■□□□□ 0.87
FYCO1-205ENST00000535325 CFAP53Q96M91 514 aa20.46■□□□□ 0.87
FYCO1-205ENST00000535325 CFAP44Q96MT7 982 aa20.45■□□□□ 0.86
FYCO1-205ENST00000535325 CDK11BP21127 795 aaKnown RBP20.41■□□□□ 0.86
FYCO1-205ENST00000535325 ARHGAP35Q9NRY4 1499 aa20.4■□□□□ 0.86
FYCO1-205ENST00000535325 ARID3CA6NKF2 412 aa20.4■□□□□ 0.86
FYCO1-205ENST00000535325 PNNQ9H307 717 aaKnown RBP20.4■□□□□ 0.86
FYCO1-205ENST00000535325 CCNB3Q8WWL7 1395 aa20.4■□□□□ 0.86
FYCO1-205ENST00000535325 KNSTRNQ9Y448 316 aa20.4■□□□□ 0.86
FYCO1-205ENST00000535325 ARID4BQ4LE39 1312 aaPredicted RBP20.39■□□□□ 0.85
FYCO1-205ENST00000535325 PPP4R2Q9NY27 417 aa20.39■□□□□ 0.85
FYCO1-205ENST00000535325 CHGAP10645 457 aaKnown RBP20.38■□□□□ 0.85
FYCO1-205ENST00000535325 TOP2AP11388 1531 aaKnown RBP20.35■□□□□ 0.85
FYCO1-205ENST00000535325 CHMP7Q8WUX9 453 aaPredicted RBP20.35■□□□□ 0.85
FYCO1-205ENST00000535325 CHIC2Q9UKJ5 165 aa20.35■□□□□ 0.85
FYCO1-205ENST00000535325 FTSJ3Q8IY81 847 aaKnown RBP20.35■□□□□ 0.85
FYCO1-205ENST00000535325 WIZO95785 1651 aa20.34■□□□□ 0.85
FYCO1-205ENST00000535325 ZRSR1Q15695 479 aaKnown RBP20.34■□□□□ 0.85
FYCO1-205ENST00000535325 PTMSP20962 102 aa20.32■□□□□ 0.84
FYCO1-205ENST00000535325 VPS8Q8N3P4 1428 aa20.32■□□□□ 0.84
FYCO1-205ENST00000535325 CCER2I3L3R5 266 aa20.32■□□□□ 0.84
FYCO1-205ENST00000535325 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.32■□□□□ 0.845e-6■□□□□ 11.1
FYCO1-205ENST00000535325 GOLGA6L6A8MZA4 724 aa20.3■□□□□ 0.84
FYCO1-205ENST00000535325 PLEKHD1A6NEE1 506 aa20.29■□□□□ 0.84
FYCO1-205ENST00000535325 KDM2AQ9Y2K7 1162 aa20.28■□□□□ 0.84
FYCO1-205ENST00000535325 NOP58Q9Y2X3 529 aaKnown RBP20.28■□□□□ 0.84
FYCO1-205ENST00000535325 SALL2Q9Y467 1007 aaPredicted RBP20.27■□□□□ 0.84
FYCO1-205ENST00000535325 SETD5Q9C0A6 1442 aa20.24■□□□□ 0.83
FYCO1-205ENST00000535325 NRDCO43847 1150 aa20.23■□□□□ 0.83
FYCO1-205ENST00000535325 FMN1Q68DA7 1419 aa20.22■□□□□ 0.83
FYCO1-205ENST00000535325 L1TD1Q5T7N2 865 aaKnown RBP20.22■□□□□ 0.83
FYCO1-205ENST00000535325 KANK1Q14678 1352 aa20.22■□□□□ 0.83
FYCO1-205ENST00000535325 HAP1P54257 671 aaPredicted RBP20.21■□□□□ 0.83
FYCO1-205ENST00000535325 NUDCQ9Y266 331 aa20.21■□□□□ 0.83
FYCO1-205ENST00000535325 PTMAP06454 111 aaKnown RBP20.2■□□□□ 0.82
FYCO1-205ENST00000535325 CFDP1Q9UEE9 299 aaPredicted RBP20.2■□□□□ 0.82
FYCO1-205ENST00000535325 RRP7BPQ9NSQ0 103 aa20.19■□□□□ 0.82
FYCO1-205ENST00000535325 SMARCA4P51532 1647 aa20.19■□□□□ 0.82
FYCO1-205ENST00000535325 CARD11Q9BXL7 1154 aa20.19■□□□□ 0.82
FYCO1-205ENST00000535325 SUPT16HQ9Y5B9 1047 aaKnown RBP20.18■□□□□ 0.82
FYCO1-205ENST00000535325 MAPK8IP3Q9UPT6 1336 aa20.16■□□□□ 0.82
FYCO1-205ENST00000535325 CHAF1AQ13111 956 aaPredicted RBP20.16■□□□□ 0.82
FYCO1-205ENST00000535325 EIF4G1Q04637 1599 aaKnown RBP20.15■□□□□ 0.82
FYCO1-205ENST00000535325 ABCC8Q09428 1581 aa20.14■□□□□ 0.81
FYCO1-205ENST00000535325 DNTTIP2Q5QJE6 756 aaKnown RBP20.13■□□□□ 0.81
FYCO1-205ENST00000535325 ARXQ96QS3 562 aa20.12■□□□□ 0.81
FYCO1-205ENST00000535325 PHLDB1Q86UU1 1377 aa20.11■□□□□ 0.81
FYCO1-205ENST00000535325 ERCC6Q03468 1493 aa20.1■□□□□ 0.81
FYCO1-205ENST00000535325 IRX6P78412 446 aaPredicted RBP20.1■□□□□ 0.81
FYCO1-205ENST00000535325 PPP1R15AO75807 674 aaPredicted RBP20.1■□□□□ 0.81
FYCO1-205ENST00000535325 EIF3AQ14152 1382 aaKnown RBP20.1■□□□□ 0.81
FYCO1-205ENST00000535325 ROCK2O75116 1388 aaKnown RBP20.08■□□□□ 0.81
FYCO1-205ENST00000535325 TMF1P82094 1093 aa20.08■□□□□ 0.81
FYCO1-205ENST00000535325 HSCBQ8IWL3 235 aa20.08■□□□□ 0.81
FYCO1-205ENST00000535325 MCCP23508 829 aa20.07■□□□□ 0.8
FYCO1-205ENST00000535325 HSP90AB1P08238 724 aaKnown RBP20.07■□□□□ 0.8
FYCO1-205ENST00000535325 KTN1Q86UP2 1357 aaKnown RBP20.06■□□□□ 0.8
FYCO1-205ENST00000535325 CUX2O14529 1486 aa20.06■□□□□ 0.8
FYCO1-205ENST00000535325 PRDM2Q13029 1718 aa20.06■□□□□ 0.8
FYCO1-205ENST00000535325 CCDC88BA6NC98 1476 aa20.05■□□□□ 0.8
FYCO1-205ENST00000535325 CCDC18Q5T9S5 1454 aa20.04■□□□□ 0.8
FYCO1-205ENST00000535325 CARMIL1Q5VZK9 1371 aa20.03■□□□□ 0.8
FYCO1-205ENST00000535325 CALD1Q05682 793 aaKnown RBP20.02■□□□□ 0.8
FYCO1-205ENST00000535325 MSNP26038 577 aaKnown RBP20.01■□□□□ 0.79
FYCO1-205ENST00000535325 RALBP1Q15311 655 aa20.01■□□□□ 0.79
FYCO1-205ENST00000535325 CHMP4AQ9BY43 222 aa20.01■□□□□ 0.79
FYCO1-205ENST00000535325 CUX1P39880 1505 aa20■□□□□ 0.79
FYCO1-205ENST00000535325 MROH2BQ7Z745 1585 aa20■□□□□ 0.79
FYCO1-205ENST00000535325 NAP1L5Q96NT1 182 aaPredicted RBP20■□□□□ 0.79
FYCO1-205ENST00000535325 CARMIL2Q6F5E8 1435 aa19.99■□□□□ 0.79
FYCO1-205ENST00000535325 HIRIP3Q9BW71 556 aaPredicted RBP19.96■□□□□ 0.79
FYCO1-205ENST00000535325 IPO8O15397 1037 aaKnown RBP19.96■□□□□ 0.79
FYCO1-205ENST00000535325 HDGFP51858 240 aaKnown RBP19.95■□□□□ 0.78
FYCO1-205ENST00000535325 GBP4Q96PP9 640 aa19.95■□□□□ 0.78
FYCO1-205ENST00000535325 TCERG1O14776 1098 aaKnown RBP19.94■□□□□ 0.78
FYCO1-205ENST00000535325 SYAP1Q96A49 352 aaPredicted RBP19.93■□□□□ 0.78
FYCO1-205ENST00000535325 KIF21BO75037 1637 aa19.93■□□□□ 0.78
FYCO1-205ENST00000535325 USP35Q9P2H5 1018 aa19.89■□□□□ 0.77
FYCO1-205ENST00000535325 RGL3Q3MIN7 710 aa19.89■□□□□ 0.77
FYCO1-205ENST00000535325 PDS5BQ9NTI5 1447 aa19.88■□□□□ 0.77
FYCO1-205ENST00000535325 GOLGA6L4A6NEF3 574 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms