RNA–Protein interactions for RNA: ENST00000534336.1

MALAT1-202, metastasis associated lung adenocarcinoma transcript 1, humanhuman

BASIC

Gene MALAT1, Length 8,708 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-202ENST00000534336 WDR43Q15061 677 aaKnown RBP eCLIP12.03□□□□□ -0.48
MALAT1-202ENST00000534336 ESF1Q9H501 851 aaKnown RBP12.03□□□□□ -0.48
MALAT1-202ENST00000534336 DRC7Q8IY82 874 aa12.03□□□□□ -0.48
MALAT1-202ENST00000534336 GOLGA6L4A6NEF3 574 aa12.03□□□□□ -0.48
MALAT1-202ENST00000534336 PLCB2Q00722 1185 aa12.03□□□□□ -0.48
MALAT1-202ENST00000534336 HNRNPUQ00839 825 aaKnown RBP eCLIP12.02□□□□□ -0.49not detected■□□□□ 8.4
MALAT1-202ENST00000534336 PPM1GO15355 546 aaPredicted RBP12.01□□□□□ -0.49
MALAT1-202ENST00000534336 TMC1Q8TDI8 760 aa11.99□□□□□ -0.49
MALAT1-202ENST00000534336 STK11IPQ8N1F8 1099 aa11.98□□□□□ -0.49
MALAT1-202ENST00000534336 STAG3Q9UJ98 1225 aa11.97□□□□□ -0.49
MALAT1-202ENST00000534336 TPRNQ4KMQ1 711 aa11.95□□□□□ -0.5
MALAT1-202ENST00000534336 HSP90AB1P08238 724 aaKnown RBP11.93□□□□□ -0.5
MALAT1-202ENST00000534336 FGD1P98174 961 aa11.93□□□□□ -0.5
MALAT1-202ENST00000534336 FAM9BQ8IZU0 186 aa11.92□□□□□ -0.5
MALAT1-202ENST00000534336 A0A0G2JS52 829 aa11.92□□□□□ -0.5
MALAT1-202ENST00000534336 TONSLQ96HA7 1378 aa11.91□□□□□ -0.5
MALAT1-202ENST00000534336 RTN4Q9NQC3 1192 aaKnown RBP11.91□□□□□ -0.5
MALAT1-202ENST00000534336 SCAF1Q9H7N4 1312 aaKnown RBP11.9□□□□□ -0.5
MALAT1-202ENST00000534336 RRP12Q5JTH9 1297 aaKnown RBP11.88□□□□□ -0.51
MALAT1-202ENST00000534336 LAS1LQ9Y4W2 734 aaKnown RBP11.88□□□□□ -0.51
MALAT1-202ENST00000534336 FTSJ3Q8IY81 847 aaKnown RBP11.88□□□□□ -0.51
MALAT1-202ENST00000534336 GOLGA2Q08379 1002 aa11.88□□□□□ -0.51
MALAT1-202ENST00000534336 TPM4P67936 248 aa11.87□□□□□ -0.51
MALAT1-202ENST00000534336 CHMP4BQ9H444 224 aaKnown RBP11.87□□□□□ -0.51
MALAT1-202ENST00000534336 SALL2Q9Y467 1007 aaPredicted RBP11.86□□□□□ -0.51
MALAT1-202ENST00000534336 GNL2Q13823 731 aaKnown RBP11.86□□□□□ -0.51
MALAT1-202ENST00000534336 CFAP44Q96MT7 982 aa11.86□□□□□ -0.51
MALAT1-202ENST00000534336 KCNJ4P48050 445 aa11.85□□□□□ -0.51
MALAT1-202ENST00000534336 NPHP1O15259 732 aa11.84□□□□□ -0.51
MALAT1-202ENST00000534336 MCCP23508 829 aa11.84□□□□□ -0.51
MALAT1-202ENST00000534336 NAP1L2Q9ULW6 460 aaPredicted RBP11.83□□□□□ -0.52
MALAT1-202ENST00000534336 LOC105371045A0A1W2PR82 267 aa11.83□□□□□ -0.52
MALAT1-202ENST00000534336 KRI1Q8N9T8 703 aaKnown RBP11.82□□□□□ -0.52
MALAT1-202ENST00000534336 CEP89Q96ST8 783 aa11.82□□□□□ -0.52
MALAT1-202ENST00000534336 SYAP1Q96A49 352 aaPredicted RBP11.82□□□□□ -0.52
MALAT1-202ENST00000534336 CCDC34Q96HJ3 373 aa11.82□□□□□ -0.52
MALAT1-202ENST00000534336 HSCBQ8IWL3 235 aa11.82□□□□□ -0.52
MALAT1-202ENST00000534336 PODXL2Q9NZ53 605 aa11.82□□□□□ -0.52
MALAT1-202ENST00000534336 HMGB1P09429 215 aaKnown RBP11.81□□□□□ -0.52
MALAT1-202ENST00000534336 NEFHP12036 1026 aa11.81□□□□□ -0.52
MALAT1-202ENST00000534336 NOP58Q9Y2X3 529 aaKnown RBP11.81□□□□□ -0.52
MALAT1-202ENST00000534336 MEX3CQ5U5Q3 659 aaKnown RBP11.79□□□□□ -0.52
MALAT1-202ENST00000534336 GPS2Q13227 327 aa11.79□□□□□ -0.52
MALAT1-202ENST00000534336 HTATSF1O43719 755 aaKnown RBP11.79□□□□□ -0.52
MALAT1-202ENST00000534336 TAOK2Q9UL54 1235 aa11.79□□□□□ -0.52
MALAT1-202ENST00000534336 CCDC70Q6NSX1 233 aa11.78□□□□□ -0.52
MALAT1-202ENST00000534336 ARID4BQ4LE39 1312 aaPredicted RBP11.77□□□□□ -0.53
MALAT1-202ENST00000534336 NOM1Q5C9Z4 860 aaKnown RBP11.77□□□□□ -0.53
MALAT1-202ENST00000534336 HSP90AA2PQ14568 343 aaPredicted RBP11.76□□□□□ -0.53
MALAT1-202ENST00000534336 HMMRO75330 724 aa11.75□□□□□ -0.53
MALAT1-202ENST00000534336 OS9Q13438 667 aaPredicted RBP11.75□□□□□ -0.53
MALAT1-202ENST00000534336 PHF14O94880 888 aa11.75□□□□□ -0.53
MALAT1-202ENST00000534336 GOLGA6L3A6NEY3 463 aa11.75□□□□□ -0.53
MALAT1-202ENST00000534336 CHGAP10645 457 aaKnown RBP11.74□□□□□ -0.53
MALAT1-202ENST00000534336 MS4A1P11836 297 aa11.73□□□□□ -0.53
MALAT1-202ENST00000534336 ARID3AQ99856 593 aa11.73□□□□□ -0.53
MALAT1-202ENST00000534336 GBP4Q96PP9 640 aa11.73□□□□□ -0.53
MALAT1-202ENST00000534336 TPM3P06753 285 aa11.73□□□□□ -0.53
MALAT1-202ENST00000534336 RSPH6AQ9H0K4 717 aa11.73□□□□□ -0.53
MALAT1-202ENST00000534336 MRS2Q9HD23 443 aa11.72□□□□□ -0.53
MALAT1-202ENST00000534336 TEX35Q5T0J7 233 aa11.72□□□□□ -0.53
MALAT1-202ENST00000534336 CSPP1Q1MSJ5 1256 aa11.72□□□□□ -0.53
MALAT1-202ENST00000534336 EIF4G2P78344 907 aaKnown RBP eCLIP11.72□□□□□ -0.53not detected■□□□□ 8.9
MALAT1-202ENST00000534336 PATL2C9JE40 543 aaKnown RBP11.72□□□□□ -0.53
MALAT1-202ENST00000534336 HSP90B1P14625 803 aaKnown RBP11.72□□□□□ -0.53
MALAT1-202ENST00000534336 TSR1Q2NL82 804 aaKnown RBP11.69□□□□□ -0.54
MALAT1-202ENST00000534336 CFAP53Q96M91 514 aa11.69□□□□□ -0.54
MALAT1-202ENST00000534336 C14orf37Q86TY3 774 aa11.68□□□□□ -0.54
MALAT1-202ENST00000534336 MAP7D2Q96T17 732 aa11.68□□□□□ -0.54
MALAT1-202ENST00000534336 CALD1Q05682 793 aaKnown RBP11.68□□□□□ -0.54
MALAT1-202ENST00000534336 ISY1Q9ULR0 285 aaKnown RBP11.68□□□□□ -0.54
MALAT1-202ENST00000534336 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.67□□□□□ -0.54
MALAT1-202ENST00000534336 DDX10Q13206 875 aaKnown RBP11.67□□□□□ -0.54
MALAT1-202ENST00000534336 HAP1P54257 671 aaPredicted RBP11.67□□□□□ -0.54
MALAT1-202ENST00000534336 ZNF771Q7L3S4 317 aaPredicted RBP11.66□□□□□ -0.54
MALAT1-202ENST00000534336 KIAA1211Q6ZU35 1233 aa11.65□□□□□ -0.54
MALAT1-202ENST00000534336 ZBTB7CA1YPR0 619 aa11.65□□□□□ -0.54
MALAT1-202ENST00000534336 CCDC191Q8NCU4 936 aa11.65□□□□□ -0.54
MALAT1-202ENST00000534336 DEKP35659 375 aaKnown RBP11.65□□□□□ -0.54
MALAT1-202ENST00000534336 IRX6P78412 446 aaPredicted RBP11.65□□□□□ -0.54
MALAT1-202ENST00000534336 PDE4CQ08493 712 aa11.65□□□□□ -0.54
MALAT1-202ENST00000534336 ZNF777Q9ULD5 760 aaPredicted RBP11.65□□□□□ -0.54
MALAT1-202ENST00000534336 TAF7LQ5H9L4 462 aa11.64□□□□□ -0.55
MALAT1-202ENST00000534336 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.64□□□□□ -0.55
MALAT1-202ENST00000534336 FBLN2P98095 1184 aa11.63□□□□□ -0.55
MALAT1-202ENST00000534336 PLPPR3Q6T4P5 718 aa11.62□□□□□ -0.55
MALAT1-202ENST00000534336 TPM2P07951 284 aa11.62□□□□□ -0.55
MALAT1-202ENST00000534336 RDXP35241 583 aaKnown RBP11.62□□□□□ -0.55
MALAT1-202ENST00000534336 CDR1P51861 262 aa11.62□□□□□ -0.55
MALAT1-202ENST00000534336 TPM1P09493 284 aa11.61□□□□□ -0.55
MALAT1-202ENST00000534336 FBXO3Q9UK99 471 aa11.61□□□□□ -0.55
MALAT1-202ENST00000534336 AK7Q96M32 723 aa11.61□□□□□ -0.55
MALAT1-202ENST00000534336 DCTN1Q14203 1278 aa11.61□□□□□ -0.55
MALAT1-202ENST00000534336 PKNOX2Q96KN3 472 aa11.61□□□□□ -0.55
MALAT1-202ENST00000534336 VSIG10Q8N0Z9 540 aa11.6□□□□□ -0.55
MALAT1-202ENST00000534336 CDCA8Q53HL2 280 aa11.59□□□□□ -0.55
MALAT1-202ENST00000534336 CWC15Q9P013 229 aaKnown RBP11.59□□□□□ -0.55
MALAT1-202ENST00000534336 MAPK8IP3Q9UPT6 1336 aa11.59□□□□□ -0.55
MALAT1-202ENST00000534336 ZRSR2Q15696 482 aaKnown RBP11.58□□□□□ -0.56
MALAT1-202ENST00000534336 NEXNQ0ZGT2 675 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms