RNA–Protein interactions for RNA: ENST00000532925.5

ATPAF1-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-210ENST00000532925 DCAF8L2P0C7V8 631 aa10.01□□□□□ -0.81
ATPAF1-210ENST00000532925 MS4A3Q96HJ5 214 aa10□□□□□ -0.81
ATPAF1-210ENST00000532925 PELP1Q8IZL8 1130 aaKnown RBP9.99□□□□□ -0.81
ATPAF1-210ENST00000532925 TSPYL2Q9H2G4 693 aaPredicted RBP9.99□□□□□ -0.81
ATPAF1-210ENST00000532925 POTEB2H3BUK9 544 aa9.98□□□□□ -0.81
ATPAF1-210ENST00000532925 ABCC9O60706 1549 aa9.94□□□□□ -0.82
ATPAF1-210ENST00000532925 OTUD5Q96G74 571 aa9.94□□□□□ -0.82
ATPAF1-210ENST00000532925 CCDC61Q9Y6R9 512 aa9.94□□□□□ -0.82
ATPAF1-210ENST00000532925 ASTLQ6HA08 431 aaPredicted RBP9.92□□□□□ -0.82
ATPAF1-210ENST00000532925 MIER1Q8N108 512 aa9.92□□□□□ -0.82
ATPAF1-210ENST00000532925 ATMINO43313 823 aaPredicted RBP9.91□□□□□ -0.82
ATPAF1-210ENST00000532925 METRNQ9UJH8 293 aa9.89□□□□□ -0.83
ATPAF1-210ENST00000532925 PLEKHG5O94827 1062 aa9.88□□□□□ -0.83
ATPAF1-210ENST00000532925 RASEFQ8IZ41 740 aa9.88□□□□□ -0.83
ATPAF1-210ENST00000532925 KIF12Q96FN5 646 aa9.87□□□□□ -0.83
ATPAF1-210ENST00000532925 RB1CC1Q8TDY2 1594 aa9.86□□□□□ -0.83
ATPAF1-210ENST00000532925 SLC39A7Q92504 469 aa9.86□□□□□ -0.83
ATPAF1-210ENST00000532925 SCRIBQ14160 1630 aa9.85□□□□□ -0.83
ATPAF1-210ENST00000532925 ATN1P54259 1190 aaPredicted RBP9.85□□□□□ -0.83
ATPAF1-210ENST00000532925 TRPC6Q9Y210 931 aa9.85□□□□□ -0.83
ATPAF1-210ENST00000532925 SUPT5HO00267 1087 aaKnown RBP9.83□□□□□ -0.84
ATPAF1-210ENST00000532925 MAP3K13O43283 966 aa9.83□□□□□ -0.84
ATPAF1-210ENST00000532925 C7P10643 843 aa9.83□□□□□ -0.84
ATPAF1-210ENST00000532925 PLCD3Q8N3E9 789 aa9.83□□□□□ -0.84
ATPAF1-210ENST00000532925 POTEJP0CG39 1038 aa9.82□□□□□ -0.84
ATPAF1-210ENST00000532925 BMP2KQ9NSY1 1161 aaPredicted RBP9.81□□□□□ -0.84
ATPAF1-210ENST00000532925 FKBP8Q14318 412 aa9.79□□□□□ -0.84
ATPAF1-210ENST00000532925 POTEFA5A3E0 1075 aa9.75□□□□□ -0.85
ATPAF1-210ENST00000532925 TIE1P35590 1138 aa9.75□□□□□ -0.85
ATPAF1-210ENST00000532925 PLSCR2Q9NRY7 297 aa9.75□□□□□ -0.85
ATPAF1-210ENST00000532925 NUBP1P53384 320 aa9.74□□□□□ -0.85
ATPAF1-210ENST00000532925 POTEMA6NI47 508 aa9.72□□□□□ -0.85
ATPAF1-210ENST00000532925 TTLL13PA6NNM8 815 aa9.72□□□□□ -0.85
ATPAF1-210ENST00000532925 ZBTB47Q9UFB7 747 aaPredicted RBP9.72□□□□□ -0.85
ATPAF1-210ENST00000532925 RSF1Q96T23 1441 aaPredicted RBP9.72□□□□□ -0.85
ATPAF1-210ENST00000532925 MAMSTRQ6ZN01 415 aa9.71□□□□□ -0.86
ATPAF1-210ENST00000532925 PCDHB13Q9Y5F0 798 aa9.71□□□□□ -0.86
ATPAF1-210ENST00000532925 POTEGQ6S5H5 508 aa9.69□□□□□ -0.86
ATPAF1-210ENST00000532925 SCUBE2Q9NQ36 999 aa9.68□□□□□ -0.86
ATPAF1-210ENST00000532925 SGIP1Q9BQI5 828 aa9.67□□□□□ -0.86
ATPAF1-210ENST00000532925 COLQQ9Y215 455 aaPredicted RBP9.67□□□□□ -0.86
ATPAF1-210ENST00000532925 IFNL1Q8IU54 200 aa9.66□□□□□ -0.86
ATPAF1-210ENST00000532925 FAM212AQ96EL1 285 aa9.66□□□□□ -0.86
ATPAF1-210ENST00000532925 TRIM35Q9UPQ4 493 aa9.66□□□□□ -0.86
ATPAF1-210ENST00000532925 UNC13AQ9UPW8 1703 aa9.65□□□□□ -0.86
ATPAF1-210ENST00000532925 SEC24BO95487 1268 aa9.65□□□□□ -0.86
ATPAF1-210ENST00000532925 BAZ1AQ9NRL2 1556 aaPredicted RBP9.64□□□□□ -0.87
ATPAF1-210ENST00000532925 LCE2DQ5TA82 110 aaPredicted RBP9.63□□□□□ -0.87
ATPAF1-210ENST00000532925 FAM163AQ96GL9 167 aaPredicted RBP9.6□□□□□ -0.87
ATPAF1-210ENST00000532925 TMEM106CQ9BVX2 250 aa9.6□□□□□ -0.87
ATPAF1-210ENST00000532925 IER5LQ5T953 404 aa9.59□□□□□ -0.87
ATPAF1-210ENST00000532925 MROH2BQ7Z745 1585 aa9.58□□□□□ -0.88
ATPAF1-210ENST00000532925 PYGBP11216 843 aa9.58□□□□□ -0.88
ATPAF1-210ENST00000532925 DCAF8Q5TAQ9 597 aa9.58□□□□□ -0.88
ATPAF1-210ENST00000532925 CECR2Q9BXF3 1484 aa9.57□□□□□ -0.88
ATPAF1-210ENST00000532925 FBXO3Q9UK99 471 aa9.56□□□□□ -0.88
ATPAF1-210ENST00000532925 SMARCA4P51532 1647 aa9.55□□□□□ -0.88
ATPAF1-210ENST00000532925 BICRAQ9NZM4 1560 aa9.52□□□□□ -0.89
ATPAF1-210ENST00000532925 PCDHB8Q9UN66 801 aa9.52□□□□□ -0.89
ATPAF1-210ENST00000532925 WIZO95785 1651 aa9.51□□□□□ -0.89
ATPAF1-210ENST00000532925 PLCG2P16885 1265 aa9.51□□□□□ -0.89
ATPAF1-210ENST00000532925 TOP2AP11388 1531 aaKnown RBP9.51□□□□□ -0.89
ATPAF1-210ENST00000532925 PEG3Q9GZU2 1588 aa9.5□□□□□ -0.89
ATPAF1-210ENST00000532925 IRX5P78411 483 aaPredicted RBP9.5□□□□□ -0.89
ATPAF1-210ENST00000532925 VASPP50552 380 aaPredicted RBP9.49□□□□□ -0.89
ATPAF1-210ENST00000532925 KLHL34Q8N239 644 aa9.48□□□□□ -0.89
ATPAF1-210ENST00000532925 SLAIN1Q8ND83 568 aa9.48□□□□□ -0.89
ATPAF1-210ENST00000532925 PCDH10Q9P2E7 1040 aa9.48□□□□□ -0.89
ATPAF1-210ENST00000532925 EIF4G1Q04637 1599 aaKnown RBP9.46□□□□□ -0.89
ATPAF1-210ENST00000532925 OCEL1Q9H607 264 aa9.43□□□□□ -0.9
ATPAF1-210ENST00000532925 GSE1Q14687 1217 aa9.42□□□□□ -0.9
ATPAF1-210ENST00000532925 ST18O60284 1047 aa9.4□□□□□ -0.9
ATPAF1-210ENST00000532925 SMARCA2P51531 1590 aa9.4□□□□□ -0.9
ATPAF1-210ENST00000532925 ZNF467Q7Z7K2 595 aaPredicted RBP9.39□□□□□ -0.91
ATPAF1-210ENST00000532925 CDAN1Q8IWY9 1227 aa9.37□□□□□ -0.91
ATPAF1-210ENST00000532925 PDCD7Q8N8D1 485 aaKnown RBP9.35□□□□□ -0.91
ATPAF1-210ENST00000532925 CHRM1P11229 460 aaPredicted RBP9.34□□□□□ -0.91
ATPAF1-210ENST00000532925 GOLGA2Q08379 1002 aa9.34□□□□□ -0.91
ATPAF1-210ENST00000532925 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.34□□□□□ -0.91
ATPAF1-210ENST00000532925 CCDC88BA6NC98 1476 aa9.34□□□□□ -0.91
ATPAF1-210ENST00000532925 PSEN1P49768 467 aa9.33□□□□□ -0.92
ATPAF1-210ENST00000532925 MKRN3Q13064 507 aaKnown RBP9.33□□□□□ -0.92
ATPAF1-210ENST00000532925 IFNLR1Q8IU57 520 aaPredicted RBP9.33□□□□□ -0.92
ATPAF1-210ENST00000532925 ATAD2BQ9ULI0 1458 aa9.31□□□□□ -0.92
ATPAF1-210ENST00000532925 TRIM41Q8WV44 630 aa9.3□□□□□ -0.92
ATPAF1-210ENST00000532925 SPOCK2Q92563 424 aa9.3□□□□□ -0.92
ATPAF1-210ENST00000532925 CIZ1Q9ULV3 898 aaPredicted RBP9.3□□□□□ -0.92
ATPAF1-210ENST00000532925 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.29□□□□□ -0.92
ATPAF1-210ENST00000532925 HMGXB3Q12766 1538 aa9.29□□□□□ -0.92
ATPAF1-210ENST00000532925 PDAP1Q13442 181 aaKnown RBP9.27□□□□□ -0.93
ATPAF1-210ENST00000532925 C3orf67Q6ZVT6 689 aa9.27□□□□□ -0.93
ATPAF1-210ENST00000532925 SNPHO15079 494 aa9.26□□□□□ -0.93
ATPAF1-210ENST00000532925 L3MBTL3Q96JM7 780 aaPredicted RBP9.26□□□□□ -0.93
ATPAF1-210ENST00000532925 BAZ1BQ9UIG0 1483 aaKnown RBP9.26□□□□□ -0.93
ATPAF1-210ENST00000532925 MARVELD3Q96A59 401 aa9.25□□□□□ -0.93
ATPAF1-210ENST00000532925 EEA1Q15075 1411 aa9.24□□□□□ -0.93
ATPAF1-210ENST00000532925 TMEM121BQ9BXQ6 578 aaPredicted RBP9.24□□□□□ -0.93
ATPAF1-210ENST00000532925 CABP2Q9NPB3 220 aa9.24□□□□□ -0.93
ATPAF1-210ENST00000532925 DPY19L2Q6NUT2 758 aa9.23□□□□□ -0.93
ATPAF1-210ENST00000532925 NCAPD3P42695 1498 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms