RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 KDM2AQ9Y2K7 1162 aa22.04■■□□□ 1.12
PPFIA1-222ENST00000532504 TONSLQ96HA7 1378 aa22.01■■□□□ 1.11
PPFIA1-222ENST00000532504 DIEXFQ68CQ4 756 aaKnown RBP22.01■■□□□ 1.11
PPFIA1-222ENST00000532504 CARMIL2Q6F5E8 1435 aa22■■□□□ 1.11
PPFIA1-222ENST00000532504 CC2D2AQ9P2K1 1620 aa21.96■■□□□ 1.11
PPFIA1-222ENST00000532504 JPH4Q96JJ6 628 aa21.95■■□□□ 1.1
PPFIA1-222ENST00000532504 MLECQ14165 292 aa21.95■■□□□ 1.1
PPFIA1-222ENST00000532504 CYB5RLQ6IPT4 315 aa21.94■■□□□ 1.1
PPFIA1-222ENST00000532504 SLC24A1O60721 1099 aa21.93■■□□□ 1.1
PPFIA1-222ENST00000532504 OSCARQ8IYS5 282 aa21.93■■□□□ 1.1
PPFIA1-222ENST00000532504 PPP1R15AO75807 674 aaPredicted RBP21.93■■□□□ 1.1
PPFIA1-222ENST00000532504 CCNB3Q8WWL7 1395 aa21.92■■□□□ 1.1
PPFIA1-222ENST00000532504 FHAD1B1AJZ9 1412 aa21.9■■□□□ 1.1
PPFIA1-222ENST00000532504 NESP48681 1621 aa21.89■■□□□ 1.1
PPFIA1-222ENST00000532504 RGL3Q3MIN7 710 aa21.88■■□□□ 1.09
PPFIA1-222ENST00000532504 ANP32CO43423 234 aa21.88■■□□□ 1.09
PPFIA1-222ENST00000532504 RAD54L2Q9Y4B4 1467 aa21.85■■□□□ 1.09
PPFIA1-222ENST00000532504 RAPGEF2Q9Y4G8 1499 aa21.81■■□□□ 1.08
PPFIA1-222ENST00000532504 PLEKHG5O94827 1062 aa21.8■■□□□ 1.08
PPFIA1-222ENST00000532504 FGD5Q6ZNL6 1462 aa21.8■■□□□ 1.08
PPFIA1-222ENST00000532504 C14orf37Q86TY3 774 aa21.79■■□□□ 1.08
PPFIA1-222ENST00000532504 ZNF316A6NFI3 1004 aaPredicted RBP21.78■■□□□ 1.08
PPFIA1-222ENST00000532504 AQRO60306 1485 aaKnown RBP eCLIP21.78■■□□□ 1.082e-6■■■■■ 27
PPFIA1-222ENST00000532504 SCAF1Q9H7N4 1312 aaKnown RBP21.77■■□□□ 1.08
PPFIA1-222ENST00000532504 FHOD3Q2V2M9 1422 aa21.74■■□□□ 1.07
PPFIA1-222ENST00000532504 NEFMP07197 916 aa21.74■■□□□ 1.07
PPFIA1-222ENST00000532504 RUSC2Q8N2Y8 1516 aa21.74■■□□□ 1.07
PPFIA1-222ENST00000532504 GGT6Q6P531 493 aa21.73■■□□□ 1.07
PPFIA1-222ENST00000532504 GAPVD1Q14C86 1478 aa21.73■■□□□ 1.07
PPFIA1-222ENST00000532504 KANK4Q5T7N3 995 aaPredicted RBP21.72■■□□□ 1.07
PPFIA1-222ENST00000532504 BICRAQ9NZM4 1560 aa21.72■■□□□ 1.07
PPFIA1-222ENST00000532504 EFCAB2Q5VUJ9 269 aa21.69■■□□□ 1.06
PPFIA1-222ENST00000532504 FMN1Q68DA7 1419 aa21.68■■□□□ 1.06
PPFIA1-222ENST00000532504 HIRIP3Q9BW71 556 aaPredicted RBP21.67■■□□□ 1.06
PPFIA1-222ENST00000532504 ERICH6Q7L0X2 663 aa21.66■■□□□ 1.06
PPFIA1-222ENST00000532504 PTPRGP23470 1445 aa21.65■■□□□ 1.06
PPFIA1-222ENST00000532504 CFTRP13569 1480 aa21.63■■□□□ 1.05
PPFIA1-222ENST00000532504 VPS8Q8N3P4 1428 aa21.62■■□□□ 1.05
PPFIA1-222ENST00000532504 IGF1RP08069 1367 aa21.62■■□□□ 1.05
PPFIA1-222ENST00000532504 DDX10Q13206 875 aaKnown RBP21.6■■□□□ 1.05
PPFIA1-222ENST00000532504 ZBTB7CA1YPR0 619 aa21.59■■□□□ 1.05
PPFIA1-222ENST00000532504 MRC2Q9UBG0 1479 aa21.58■■□□□ 1.05
PPFIA1-222ENST00000532504 HNRNPMP52272 730 aaKnown RBP eCLIP21.58■■□□□ 1.053e-8■■■■■ 30.9
PPFIA1-222ENST00000532504 HMGXB3Q12766 1538 aa21.56■■□□□ 1.04
PPFIA1-222ENST00000532504 TMC1Q8TDI8 760 aa21.54■■□□□ 1.04
PPFIA1-222ENST00000532504 ARHGAP35Q9NRY4 1499 aa21.54■■□□□ 1.04
PPFIA1-222ENST00000532504 KANK1Q14678 1352 aa21.53■■□□□ 1.04
PPFIA1-222ENST00000532504 BCL11AQ9H165 835 aa21.53■■□□□ 1.04
PPFIA1-222ENST00000532504 SIN3AQ96ST3 1273 aa21.51■■□□□ 1.03
PPFIA1-222ENST00000532504 KIF3BO15066 747 aa21.48■■□□□ 1.03
PPFIA1-222ENST00000532504 CLSPNQ9HAW4 1339 aa21.47■■□□□ 1.03
PPFIA1-222ENST00000532504 A0A0G2JS52 829 aa21.47■■□□□ 1.03
PPFIA1-222ENST00000532504 FAM69CQ0P6D2 419 aa21.47■■□□□ 1.03
PPFIA1-222ENST00000532504 EIF4G2P78344 907 aaKnown RBP eCLIP21.46■■□□□ 1.03
PPFIA1-222ENST00000532504 CANXP27824 592 aaKnown RBP21.46■■□□□ 1.03
PPFIA1-222ENST00000532504 GRIN2BQ13224 1484 aa21.45■■□□□ 1.02
PPFIA1-222ENST00000532504 ACIN1Q9UKV3 1341 aaKnown RBP21.45■■□□□ 1.02
PPFIA1-222ENST00000532504 POGKQ9P215 609 aa21.44■■□□□ 1.02
PPFIA1-222ENST00000532504 SPAG9O60271 1321 aaKnown RBP21.44■■□□□ 1.02
PPFIA1-222ENST00000532504 SALL2Q9Y467 1007 aaPredicted RBP21.44■■□□□ 1.02
PPFIA1-222ENST00000532504 HAP1P54257 671 aaPredicted RBP21.43■■□□□ 1.02
PPFIA1-222ENST00000532504 FOXD1Q16676 465 aa21.43■■□□□ 1.02
PPFIA1-222ENST00000532504 CARD11Q9BXL7 1154 aa21.42■■□□□ 1.02
PPFIA1-222ENST00000532504 TOPBP1Q92547 1522 aa21.42■■□□□ 1.02
PPFIA1-222ENST00000532504 LMOD2Q6P5Q4 547 aa21.42■■□□□ 1.02
PPFIA1-222ENST00000532504 IFT140Q96RY7 1462 aa21.4■■□□□ 1.02
PPFIA1-222ENST00000532504 PKD2Q13563 968 aa21.4■■□□□ 1.02
PPFIA1-222ENST00000532504 FAM9BQ8IZU0 186 aa21.4■■□□□ 1.02
PPFIA1-222ENST00000532504 DCAF11Q8TEB1 546 aa21.4■■□□□ 1.02
PPFIA1-222ENST00000532504 CCDC18Q5T9S5 1454 aa21.37■■□□□ 1.01
PPFIA1-222ENST00000532504 POLA1P09884 1462 aaPredicted RBP21.36■■□□□ 1.01
PPFIA1-222ENST00000532504 SAFB2Q14151 953 aaKnown RBP eCLIP21.34■■□□□ 1.01
PPFIA1-222ENST00000532504 HDGFP51858 240 aaKnown RBP21.34■■□□□ 1.01
PPFIA1-222ENST00000532504 NUP155O75694 1391 aa21.34■■□□□ 1.01
PPFIA1-222ENST00000532504 ANKRD30AQ9BXX3 1397 aa21.33■■□□□ 1.01
PPFIA1-222ENST00000532504 DAXXQ9UER7 740 aaPredicted RBP21.33■■□□□ 1
PPFIA1-222ENST00000532504 WASHC2CQ9Y4E1 1318 aa21.33■■□□□ 1
PPFIA1-222ENST00000532504 ZBTB47Q9UFB7 747 aaPredicted RBP21.31■■□□□ 1
PPFIA1-222ENST00000532504 PRG4Q92954 1404 aaPredicted RBP21.31■■□□□ 1
PPFIA1-222ENST00000532504 SYNJ1O43426 1573 aa21.3■■□□□ 1
PPFIA1-222ENST00000532504 STK26Q9P289 416 aa21.3■■□□□ 1
PPFIA1-222ENST00000532504 PPM1GO15355 546 aaPredicted RBP21.29■■□□□ 1
PPFIA1-222ENST00000532504 SNAPC4Q5SXM2 1469 aa21.28■■□□□ 1
PPFIA1-222ENST00000532504 CUX1P39880 1505 aa21.28■■□□□ 1
PPFIA1-222ENST00000532504 WDR43Q15061 677 aaKnown RBP eCLIP21.27■■□□□ 1
PPFIA1-222ENST00000532504 NUTM2DQ5VT03 806 aaPredicted RBP21.26■□□□□ 0.99
PPFIA1-222ENST00000532504 RSPH4AQ5TD94 716 aa21.26■□□□□ 0.99
PPFIA1-222ENST00000532504 SETD5Q9C0A6 1442 aa21.26■□□□□ 0.99
PPFIA1-222ENST00000532504 UNC13AQ9UPW8 1703 aa21.26■□□□□ 0.99
PPFIA1-222ENST00000532504 HNRNPUQ00839 825 aaKnown RBP eCLIP21.23■□□□□ 0.99
PPFIA1-222ENST00000532504 MRS2Q9HD23 443 aa21.23■□□□□ 0.99
PPFIA1-222ENST00000532504 LAMC3Q9Y6N6 1575 aa21.23■□□□□ 0.99
PPFIA1-222ENST00000532504 MPHOSPH9Q99550 1183 aa21.22■□□□□ 0.99
PPFIA1-222ENST00000532504 CDCA8Q53HL2 280 aa21.21■□□□□ 0.99
PPFIA1-222ENST00000532504 DNMBPQ6XZF7 1577 aa21.19■□□□□ 0.98
PPFIA1-222ENST00000532504 KNSTRNQ9Y448 316 aa21.19■□□□□ 0.98
PPFIA1-222ENST00000532504 TNNT2P45379 298 aaPredicted RBP21.17■□□□□ 0.98
PPFIA1-222ENST00000532504 SRPK2P78362 688 aaKnown RBP21.17■□□□□ 0.98
PPFIA1-222ENST00000532504 SOX12O15370 315 aa21.16■□□□□ 0.98
PPFIA1-222ENST00000532504 SENP3-EIF4A1A0A087X0R7 540 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms