RNA–Protein interactions for RNA: ENST00000532461.5

RDX-213, Transcript of radixin, humanhuman

TSL 1 (best)

Gene RDX, Length 3,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-213ENST00000532461 PCF11O94913 1555 aaKnown RBP8.79□□□□□ -1
RDX-213ENST00000532461 CCER1Q8TC90 406 aaPredicted RBP8.79□□□□□ -1
RDX-213ENST00000532461 PBRM1Q86U86 1689 aa8.78□□□□□ -1
RDX-213ENST00000532461 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.78□□□□□ -1
RDX-213ENST00000532461 FHAD1B1AJZ9 1412 aa8.77□□□□□ -1
RDX-213ENST00000532461 LRRC9Q6ZRR7 1453 aa8.77□□□□□ -1
RDX-213ENST00000532461 SNAPC4Q5SXM2 1469 aa8.75□□□□□ -1.01
RDX-213ENST00000532461 NESP48681 1621 aa8.75□□□□□ -1.01
RDX-213ENST00000532461 CASKIN1Q8WXD9 1431 aa8.75□□□□□ -1.01
RDX-213ENST00000532461 DHX57Q6P158 1386 aaKnown RBP8.74□□□□□ -1.01
RDX-213ENST00000532461 RAD54L2Q9Y4B4 1467 aa8.74□□□□□ -1.01
RDX-213ENST00000532461 PDS5BQ9NTI5 1447 aa8.73□□□□□ -1.01
RDX-213ENST00000532461 CCNB3Q8WWL7 1395 aa8.72□□□□□ -1.01
RDX-213ENST00000532461 ARHGEF11O15085 1522 aa8.72□□□□□ -1.01
RDX-213ENST00000532461 KANK4Q5T7N3 995 aaPredicted RBP8.71□□□□□ -1.01
RDX-213ENST00000532461 APLP2Q06481 763 aa8.71□□□□□ -1.02
RDX-213ENST00000532461 ADAMTS12P58397 1594 aa8.7□□□□□ -1.02
RDX-213ENST00000532461 GRIN2BQ13224 1484 aa8.7□□□□□ -1.02
RDX-213ENST00000532461 MAPKBP1O60336 1514 aa8.7□□□□□ -1.02
RDX-213ENST00000532461 GAPVD1Q14C86 1478 aa8.69□□□□□ -1.02
RDX-213ENST00000532461 WDR62O43379 1518 aa8.68□□□□□ -1.02
RDX-213ENST00000532461 FMN1Q68DA7 1419 aa8.68□□□□□ -1.02
RDX-213ENST00000532461 ZNF316A6NFI3 1004 aaPredicted RBP8.68□□□□□ -1.02
RDX-213ENST00000532461 SUPT6HQ7KZ85 1726 aaKnown RBP8.67□□□□□ -1.02
RDX-213ENST00000532461 EHBP1L1Q8N3D4 1523 aa8.65□□□□□ -1.02
RDX-213ENST00000532461 DIEXFQ68CQ4 756 aaKnown RBP8.65□□□□□ -1.02
RDX-213ENST00000532461 GCC2Q8IWJ2 1684 aa8.65□□□□□ -1.02
RDX-213ENST00000532461 MRC2Q9UBG0 1479 aa8.65□□□□□ -1.02
RDX-213ENST00000532461 UGGT2Q9NYU1 1516 aa8.65□□□□□ -1.02
RDX-213ENST00000532461 PHLDB1Q86UU1 1377 aa8.65□□□□□ -1.03
RDX-213ENST00000532461 HECW1Q76N89 1606 aa8.64□□□□□ -1.03
RDX-213ENST00000532461 IQGAP2Q13576 1575 aa8.64□□□□□ -1.03
RDX-213ENST00000532461 CCDC18Q5T9S5 1454 aa8.64□□□□□ -1.03
RDX-213ENST00000532461 TCOF1Q13428 1488 aaKnown RBP8.63□□□□□ -1.03
RDX-213ENST00000532461 FHOD3Q2V2M9 1422 aa8.62□□□□□ -1.03
RDX-213ENST00000532461 SETD5Q9C0A6 1442 aa8.62□□□□□ -1.03
RDX-213ENST00000532461 HNRNPUL2Q1KMD3 747 aaKnown RBP8.61□□□□□ -1.03
RDX-213ENST00000532461 IFT140Q96RY7 1462 aa8.6□□□□□ -1.03
RDX-213ENST00000532461 PTPN23Q9H3S7 1636 aa8.6□□□□□ -1.03
RDX-213ENST00000532461 AKNAQ7Z591 1439 aa8.6□□□□□ -1.03
RDX-213ENST00000532461 RAB3GAP2Q9H2M9 1393 aa8.6□□□□□ -1.03
RDX-213ENST00000532461 FGD6Q6ZV73 1430 aa8.59□□□□□ -1.03
RDX-213ENST00000532461 TTBK1Q5TCY1 1321 aaPredicted RBP8.59□□□□□ -1.03
RDX-213ENST00000532461 MAGI3Q5TCQ9 1506 aa8.59□□□□□ -1.03
RDX-213ENST00000532461 SCAF1Q9H7N4 1312 aaKnown RBP8.59□□□□□ -1.03
RDX-213ENST00000532461 ACIN1Q9UKV3 1341 aaKnown RBP8.58□□□□□ -1.04
RDX-213ENST00000532461 TIMELESSQ9UNS1 1208 aa8.58□□□□□ -1.04
RDX-213ENST00000532461 ADCY10Q96PN6 1610 aa8.58□□□□□ -1.04
RDX-213ENST00000532461 HFM1A2PYH4 1435 aa8.58□□□□□ -1.04
RDX-213ENST00000532461 KIAA0556O60303 1618 aa8.57□□□□□ -1.04
RDX-213ENST00000532461 EIF4G3O43432 1585 aaKnown RBP8.57□□□□□ -1.04
RDX-213ENST00000532461 MYOM3Q5VTT5 1437 aa8.56□□□□□ -1.04
RDX-213ENST00000532461 NCOA2Q15596 1464 aa8.56□□□□□ -1.04
RDX-213ENST00000532461 TDRD9Q8NDG6 1382 aaKnown RBP8.54□□□□□ -1.04
RDX-213ENST00000532461 EPRSP07814 1512 aaKnown RBP8.54□□□□□ -1.04
RDX-213ENST00000532461 FOXD1Q16676 465 aa8.54□□□□□ -1.04
RDX-213ENST00000532461 MIA2Q96PC5 1412 aa8.54□□□□□ -1.04
RDX-213ENST00000532461 KIAA0586Q9BVV6 1533 aa8.54□□□□□ -1.04
RDX-213ENST00000532461 DISP1Q96F81 1524 aa8.53□□□□□ -1.04
RDX-213ENST00000532461 KDM5BQ9UGL1 1544 aa8.53□□□□□ -1.04
RDX-213ENST00000532461 RAPGEF6Q8TEU7 1601 aa8.53□□□□□ -1.04
RDX-213ENST00000532461 MAGI1Q96QZ7 1491 aaPredicted RBP8.53□□□□□ -1.04
RDX-213ENST00000532461 CROCC2H7BZ55 1655 aa8.53□□□□□ -1.04
RDX-213ENST00000532461 UACAQ9BZF9 1416 aa8.52□□□□□ -1.05
RDX-213ENST00000532461 DNMT1P26358 1616 aaKnown RBP8.52□□□□□ -1.05
RDX-213ENST00000532461 PTPRKQ15262 1439 aa8.52□□□□□ -1.05
RDX-213ENST00000532461 ADGBQ8N7X0 1667 aa8.51□□□□□ -1.05
RDX-213ENST00000532461 ITSN2Q9NZM3 1697 aa8.51□□□□□ -1.05
RDX-213ENST00000532461 CENPBP07199 599 aaPredicted RBP8.51□□□□□ -1.05
RDX-213ENST00000532461 NEUROD1Q13562 356 aa8.51□□□□□ -1.05
RDX-213ENST00000532461 NAIPQ13075 1403 aa8.51□□□□□ -1.05
RDX-213ENST00000532461 POLR1AO95602 1720 aaPredicted RBP8.51□□□□□ -1.05
RDX-213ENST00000532461 GRIN2AQ12879 1464 aa8.5□□□□□ -1.05
RDX-213ENST00000532461 RANGAP1P46060 587 aaPredicted RBP8.5□□□□□ -1.05
RDX-213ENST00000532461 CEP170Q5SW79 1584 aa8.49□□□□□ -1.05
RDX-213ENST00000532461 DENND4BO75064 1496 aaPredicted RBP8.48□□□□□ -1.05
RDX-213ENST00000532461 DNAJC5BQ9UF47 199 aa8.48□□□□□ -1.05
RDX-213ENST00000532461 ZNF608Q9ULD9 1512 aaPredicted RBP8.48□□□□□ -1.05
RDX-213ENST00000532461 NUP160Q12769 1436 aa8.47□□□□□ -1.05
RDX-213ENST00000532461 MIER1Q8N108 512 aa8.47□□□□□ -1.05
RDX-213ENST00000532461 ROCK1Q13464 1354 aa8.47□□□□□ -1.05
RDX-213ENST00000532461 SYNJ2O15056 1496 aa8.46□□□□□ -1.05
RDX-213ENST00000532461 NUP153P49790 1475 aaKnown RBP8.46□□□□□ -1.05
RDX-213ENST00000532461 MTUS2Q5JR59 1369 aa8.46□□□□□ -1.05
RDX-213ENST00000532461 PELP1Q8IZL8 1130 aaKnown RBP8.46□□□□□ -1.06
RDX-213ENST00000532461 KDM6BO15054 1643 aa8.45□□□□□ -1.06
RDX-213ENST00000532461 ABCA8O94911 1581 aa8.45□□□□□ -1.06
RDX-213ENST00000532461 CDK13Q14004 1512 aaKnown RBP8.44□□□□□ -1.06
RDX-213ENST00000532461 ADGRL2O95490 1459 aa8.43□□□□□ -1.06
RDX-213ENST00000532461 SHROOM2Q13796 1616 aa8.43□□□□□ -1.06
RDX-213ENST00000532461 CDC42BPAQ5VT25 1732 aa8.43□□□□□ -1.06
RDX-213ENST00000532461 P3H3Q8IVL6 736 aa8.41□□□□□ -1.06
RDX-213ENST00000532461 PPP1R15AO75807 674 aaPredicted RBP8.4□□□□□ -1.06
RDX-213ENST00000532461 DAPK1P53355 1430 aa8.4□□□□□ -1.07
RDX-213ENST00000532461 KDM5DQ9BY66 1539 aa8.39□□□□□ -1.07
RDX-213ENST00000532461 SHANK2Q9UPX8 1470 aa8.39□□□□□ -1.07
RDX-213ENST00000532461 ARHGEF5Q12774 1597 aa8.38□□□□□ -1.07
RDX-213ENST00000532461 KIF14Q15058 1648 aa8.38□□□□□ -1.07
RDX-213ENST00000532461 TROQ12816 1431 aaPredicted RBP8.38□□□□□ -1.07
RDX-213ENST00000532461 FAM50AQ14320 339 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms