RNA–Protein interactions for RNA: ENST00000532461.5

RDX-213, Transcript of radixin, humanhuman

TSL 1 (best)

Gene RDX, Length 3,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-213ENST00000532461 LCE3AQ5TA76 89 aa2.32□□□□□ -2.04
RDX-213ENST00000532461 KRTAP10-12P60413 245 aa2.27□□□□□ -2.05
RDX-213ENST00000532461 PRO2289Q9P1D8 64 aa2.24□□□□□ -2.05
RDX-213ENST00000532461 KRTAP10-7P60409 375 aaPredicted RBP2.23□□□□□ -2.05
RDX-213ENST00000532461 KRTAP12-3P60328 96 aa2.22□□□□□ -2.05
RDX-213ENST00000532461 USH2AO75445 5202 aa2.14□□□□□ -2.07
RDX-213ENST00000532461 KRTAP19-5Q3LI72 72 aa2.14□□□□□ -2.07
RDX-213ENST00000532461 LCE3CQ5T5A8 94 aa2.13□□□□□ -2.07
RDX-213ENST00000532461 SSPOA2VEC9 5147 aa2.12□□□□□ -2.07
RDX-213ENST00000532461 KRTAP19-7Q3SYF9 63 aa2.11□□□□□ -2.07
RDX-213ENST00000532461 KRTAP19-6Q3LI70 58 aa2.09□□□□□ -2.08
RDX-213ENST00000532461 INE1O15225 51 aa2.08□□□□□ -2.08
RDX-213ENST00000532461 MT1EP04732 61 aa2.05□□□□□ -2.08
RDX-213ENST00000532461 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.05□□□□□ -2.08
RDX-213ENST00000532461 KRTAP9-6A8MVA2 160 aa2.04□□□□□ -2.08
RDX-213ENST00000532461 KRTAP2-3P0C7H8 128 aa2.04□□□□□ -2.08
RDX-213ENST00000532461 MT1LQ93083 61 aa2.04□□□□□ -2.08
RDX-213ENST00000532461 KRTAP2-4Q9BYR9 128 aa2.04□□□□□ -2.08
RDX-213ENST00000532461 KRTAP2-1Q9BYU5 128 aa2.04□□□□□ -2.08
RDX-213ENST00000532461 MUC5BQ9HC84 5762 aaPredicted RBP2.02□□□□□ -2.09
RDX-213ENST00000532461 KMT2DO14686 5537 aa2.01□□□□□ -2.09
RDX-213ENST00000532461 CRCT1Q9UGL9 99 aa1.95□□□□□ -2.1
RDX-213ENST00000532461 MT1GP13640 62 aa1.92□□□□□ -2.1
RDX-213ENST00000532461 KRTAP19-3Q7Z4W3 81 aa1.91□□□□□ -2.1
RDX-213ENST00000532461 LCE1EQ5T753 118 aa1.91□□□□□ -2.1
RDX-213ENST00000532461 MT1MQ8N339 61 aa1.9□□□□□ -2.11
RDX-213ENST00000532461 FCGBPQ9Y6R7 5405 aaPredicted RBP1.88□□□□□ -2.11
RDX-213ENST00000532461 LCE1AQ5T7P2 110 aa1.88□□□□□ -2.11
RDX-213ENST00000532461 KRTAP5-11Q6L8G4 156 aa1.87□□□□□ -2.11
RDX-213ENST00000532461 KRTAP6-3Q3LI67 103 aa1.83□□□□□ -2.12
RDX-213ENST00000532461 KRTAP5-9P26371 169 aa1.82□□□□□ -2.12
RDX-213ENST00000532461 KRTAP4-3Q9BYR4 195 aa1.82□□□□□ -2.12
RDX-213ENST00000532461 GPR98Q8WXG9 6306 aa1.8□□□□□ -2.12
RDX-213ENST00000532461 MT1AP04731 61 aa1.78□□□□□ -2.12
RDX-213ENST00000532461 KRTAP5-5Q701N2 237 aaPredicted RBP1.78□□□□□ -2.13
RDX-213ENST00000532461 MUC12Q9UKN1 5478 aa1.77□□□□□ -2.13
RDX-213ENST00000532461 MT3P25713 68 aa1.76□□□□□ -2.13
RDX-213ENST00000532461 SPRR2FQ96RM1 72 aa1.75□□□□□ -2.13
RDX-213ENST00000532461 MACF1Q9UPN3 7388 aaKnown RBP1.74□□□□□ -2.13
RDX-213ENST00000532461 KRTAP2-2Q9BYT5 123 aa1.74□□□□□ -2.13
RDX-213ENST00000532461 FSIP2Q5CZC0 6907 aa1.71□□□□□ -2.14
RDX-213ENST00000532461 KRTAP5-4Q6L8H1 288 aa1.71□□□□□ -2.14
RDX-213ENST00000532461 KRTAP6-1Q3LI64 71 aa1.69□□□□□ -2.14
RDX-213ENST00000532461 NEBP20929 6669 aa1.66□□□□□ -2.14
RDX-213ENST00000532461 KRTAP12-4P60329 112 aa1.66□□□□□ -2.14
RDX-213ENST00000532461 KRTAP5-1Q6L8H4 278 aa1.66□□□□□ -2.14
RDX-213ENST00000532461 SYNE2Q8WXH0 6885 aaKnown RBP1.65□□□□□ -2.14
RDX-213ENST00000532461 MDN1Q9NU22 5596 aa1.65□□□□□ -2.15
RDX-213ENST00000532461 KRTAP20-1Q3LI63 56 aa1.64□□□□□ -2.15
RDX-213ENST00000532461 SPRR2EP22531 72 aa1.62□□□□□ -2.15
RDX-213ENST00000532461 SPRR2BP35325 72 aa1.62□□□□□ -2.15
RDX-213ENST00000532461 SPRR2AP35326 72 aa1.62□□□□□ -2.15
RDX-213ENST00000532461 KRTAP4-4Q9BYR3 166 aa1.61□□□□□ -2.15
RDX-213ENST00000532461 LCE3DQ9BYE3 92 aa1.6□□□□□ -2.15
RDX-213ENST00000532461 LCE3EQ5T5B0 92 aa1.58□□□□□ -2.16
RDX-213ENST00000532461 DSTQ03001 7570 aaKnown RBP1.58□□□□□ -2.16
RDX-213ENST00000532461 SPRR2DP22532 72 aa1.56□□□□□ -2.16
RDX-213ENST00000532461 KRTAP5-7Q6L8G8 165 aa1.52□□□□□ -2.17
RDX-213ENST00000532461 KRTAP6-2Q3LI66 62 aa1.5□□□□□ -2.17
RDX-213ENST00000532461 SYNE1Q8NF91 8797 aaKnown RBP1.5□□□□□ -2.17
RDX-213ENST00000532461 KRTAP5-2Q701N4 177 aa1.49□□□□□ -2.17
RDX-213ENST00000532461 OBSCNQ5VST9 7968 aa1.47□□□□□ -2.17
RDX-213ENST00000532461 PRM1P04553 51 aa1.46□□□□□ -2.18
RDX-213ENST00000532461 KRTAP5-10Q6L8G5 202 aa1.44□□□□□ -2.18
RDX-213ENST00000532461 AHNAKQ09666 5890 aaKnown RBP1.44□□□□□ -2.18
RDX-213ENST00000532461 KRTAP20-2Q3LI61 65 aa1.41□□□□□ -2.18
RDX-213ENST00000532461 LCE1FQ5T754 118 aa1.38□□□□□ -2.19
RDX-213ENST00000532461 KRTAP5-8O75690 187 aa1.35□□□□□ -2.19
RDX-213ENST00000532461 AHNAK2Q8IVF2 5795 aa1.32□□□□□ -2.2
RDX-213ENST00000532461 MT4P47944 62 aa1.3□□□□□ -2.2
RDX-213ENST00000532461 MUC19Q7Z5P9 8384 aa1.3□□□□□ -2.2
RDX-213ENST00000532461 MUC5ACP98088 5654 aa1.28□□□□□ -2.21
RDX-213ENST00000532461 LCE1CQ5T751 118 aa1.26□□□□□ -2.21
RDX-213ENST00000532461 LCE1BQ5T7P3 118 aa1.26□□□□□ -2.21
RDX-213ENST00000532461 KRTAP21-2Q3LI59 83 aa1.15□□□□□ -2.23
RDX-213ENST00000532461 KRTAP21-1Q3LI58 79 aa1.02□□□□□ -2.25
RDX-213ENST00000532461 PHGR1C9JFL3 82 aa0.93□□□□□ -2.26
RDX-213ENST00000532461 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 58.6 ms