RNA–Protein interactions for RNA: ENST00000532001.6

PTP4A2-213, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 911 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-213ENST00000532001 CSRNP3Q8WYN3 585 aa15.76■□□□□ 0.11
PTP4A2-213ENST00000532001 POLA1P09884 1462 aaPredicted RBP15.73■□□□□ 0.11
PTP4A2-213ENST00000532001 EHMT2Q96KQ7 1210 aa15.7■□□□□ 0.1
PTP4A2-213ENST00000532001 WDR97A6NE52 1622 aa15.69■□□□□ 0.1
PTP4A2-213ENST00000532001 CHD1O14646 1710 aa15.65■□□□□ 0.1
PTP4A2-213ENST00000532001 CUX1P39880 1505 aa15.64■□□□□ 0.09
PTP4A2-213ENST00000532001 TRIM41Q8WV44 630 aa15.64■□□□□ 0.09
PTP4A2-213ENST00000532001 AQRO60306 1485 aaKnown RBP eCLIP15.64■□□□□ 0.096e-8■■■■□ 23.2
PTP4A2-213ENST00000532001 RIMBP3CA6NJZ7 1639 aa15.63■□□□□ 0.09
PTP4A2-213ENST00000532001 RIMBP3BA6NNM3 1639 aa15.63■□□□□ 0.09
PTP4A2-213ENST00000532001 RIMBP3Q9UFD9 1639 aa15.63■□□□□ 0.09
PTP4A2-213ENST00000532001 FGD5Q6ZNL6 1462 aa15.63■□□□□ 0.09
PTP4A2-213ENST00000532001 SOGA1O94964 1423 aa15.61■□□□□ 0.09
PTP4A2-213ENST00000532001 RAD54L2Q9Y4B4 1467 aa15.61■□□□□ 0.09
PTP4A2-213ENST00000532001 ARHGEF11O15085 1522 aa15.58■□□□□ 0.09
PTP4A2-213ENST00000532001 TDRD9Q8NDG6 1382 aaKnown RBP15.54■□□□□ 0.08
PTP4A2-213ENST00000532001 MAGI1Q96QZ7 1491 aaPredicted RBP15.53■□□□□ 0.08
PTP4A2-213ENST00000532001 ZBTB12Q9Y330 459 aaPredicted RBP15.53■□□□□ 0.08
PTP4A2-213ENST00000532001 SNAPC4Q5SXM2 1469 aa15.52■□□□□ 0.08
PTP4A2-213ENST00000532001 GRIN2BQ13224 1484 aa15.52■□□□□ 0.07
PTP4A2-213ENST00000532001 PBRM1Q86U86 1689 aa15.51■□□□□ 0.07
PTP4A2-213ENST00000532001 SUPT5HO00267 1087 aaKnown RBP15.5■□□□□ 0.07
PTP4A2-213ENST00000532001 ABCA5Q8WWZ7 1642 aa15.5■□□□□ 0.07
PTP4A2-213ENST00000532001 ABCA10Q8WWZ4 1543 aa15.49■□□□□ 0.07
PTP4A2-213ENST00000532001 CLASP1Q7Z460 1538 aa15.48■□□□□ 0.07
PTP4A2-213ENST00000532001 POTEHQ6S545 545 aa15.48■□□□□ 0.07
PTP4A2-213ENST00000532001 BIVM-ERCC5R4GMW8 1640 aa15.47■□□□□ 0.07
PTP4A2-213ENST00000532001 SYNJ2O15056 1496 aa15.46■□□□□ 0.07
PTP4A2-213ENST00000532001 SYNJ1O43426 1573 aa15.46■□□□□ 0.07
PTP4A2-213ENST00000532001 GAPVD1Q14C86 1478 aa15.46■□□□□ 0.06
PTP4A2-213ENST00000532001 TOP2BQ02880 1626 aa15.45■□□□□ 0.06
PTP4A2-213ENST00000532001 ARAP1Q96P48 1450 aa15.44■□□□□ 0.06
PTP4A2-213ENST00000532001 FBLN2P98095 1184 aa15.43■□□□□ 0.06
PTP4A2-213ENST00000532001 RBM42Q9BTD8 480 aaKnown RBP15.43■□□□□ 0.06
PTP4A2-213ENST00000532001 WRNQ14191 1432 aaPredicted RBP eCLIP15.41■□□□□ 0.06
PTP4A2-213ENST00000532001 CHMP7Q8WUX9 453 aaPredicted RBP15.38■□□□□ 0.05
PTP4A2-213ENST00000532001 ADAMTS12P58397 1594 aa15.36■□□□□ 0.05
PTP4A2-213ENST00000532001 CYB5RLQ6IPT4 315 aa15.34■□□□□ 0.05
PTP4A2-213ENST00000532001 GRIN2AQ12879 1464 aa15.32■□□□□ 0.04
PTP4A2-213ENST00000532001 ERICH3Q5RHP9 1530 aa15.32■□□□□ 0.04
PTP4A2-213ENST00000532001 NUP160Q12769 1436 aa15.29■□□□□ 0.04
PTP4A2-213ENST00000532001 FHAD1B1AJZ9 1412 aa15.27■□□□□ 0.04
PTP4A2-213ENST00000532001 CEP170Q5SW79 1584 aa15.26■□□□□ 0.03
PTP4A2-213ENST00000532001 SHROOM2Q13796 1616 aa15.25■□□□□ 0.03
PTP4A2-213ENST00000532001 MKRN4PQ13434 485 aaPredicted RBP15.21■□□□□ 0.03
PTP4A2-213ENST00000532001 ERCC6L2Q5T890 1561 aa15.18■□□□□ 0.02
PTP4A2-213ENST00000532001 RUSC2Q8N2Y8 1516 aa15.15■□□□□ 0.02
PTP4A2-213ENST00000532001 AKT1S1Q96B36 256 aa15.14■□□□□ 0.01
PTP4A2-213ENST00000532001 CUL7Q14999 1698 aa15.13■□□□□ 0.01
PTP4A2-213ENST00000532001 KIF27Q86VH2 1401 aa15.09■□□□□ 0.01
PTP4A2-213ENST00000532001 SPDYE2BA6NHP3 402 aa15.07■□□□□ 0
PTP4A2-213ENST00000532001 SPDYE6P0CI01 402 aa15.07■□□□□ 0
PTP4A2-213ENST00000532001 SPDYE2Q495Y8 402 aa15.07■□□□□ 0
PTP4A2-213ENST00000532001 IGF1RP08069 1367 aa15.06■□□□□ 0
PTP4A2-213ENST00000532001 PRG4Q92954 1404 aaPredicted RBP15.06■□□□□ 0
PTP4A2-213ENST00000532001 KIAA0586Q9BVV6 1533 aa15.03■□□□□ -0
PTP4A2-213ENST00000532001 JPH4Q96JJ6 628 aa15.02■□□□□ -0
PTP4A2-213ENST00000532001 REM2Q8IYK8 340 aaPredicted RBP14.99□□□□□ -0.01
PTP4A2-213ENST00000532001 KIF13AQ9H1H9 1805 aa14.97□□□□□ -0.01
PTP4A2-213ENST00000532001 CARMIL1Q5VZK9 1371 aa14.96□□□□□ -0.02
PTP4A2-213ENST00000532001 MAPKBP1O60336 1514 aa14.94□□□□□ -0.02
PTP4A2-213ENST00000532001 CHRDL2Q6WN34 429 aa14.94□□□□□ -0.02
PTP4A2-213ENST00000532001 ADCY10Q96PN6 1610 aa14.94□□□□□ -0.02
PTP4A2-213ENST00000532001 SSUH2Q9Y2M2 353 aa14.92□□□□□ -0.02
PTP4A2-213ENST00000532001 IQGAP2Q13576 1575 aa14.91□□□□□ -0.02
PTP4A2-213ENST00000532001 ZNF692Q9BU19 519 aaPredicted RBP14.91□□□□□ -0.02
PTP4A2-213ENST00000532001 ABCC10Q5T3U5 1492 aa14.88□□□□□ -0.03
PTP4A2-213ENST00000532001 DIP2BQ9P265 1576 aa14.87□□□□□ -0.03
PTP4A2-213ENST00000532001 RAPGEF2Q9Y4G8 1499 aa14.86□□□□□ -0.03
PTP4A2-213ENST00000532001 CARMIL2Q6F5E8 1435 aa14.85□□□□□ -0.03
PTP4A2-213ENST00000532001 TNIKQ9UKE5 1360 aa14.84□□□□□ -0.03
PTP4A2-213ENST00000532001 UGGT2Q9NYU1 1516 aa14.83□□□□□ -0.04
PTP4A2-213ENST00000532001 PITPNM1O00562 1244 aa14.83□□□□□ -0.04
PTP4A2-213ENST00000532001 PTPRGP23470 1445 aa14.83□□□□□ -0.04
PTP4A2-213ENST00000532001 DISP1Q96F81 1524 aa14.82□□□□□ -0.04
PTP4A2-213ENST00000532001 NPM1P06748 294 aaKnown RBP eCLIP14.82□□□□□ -0.04
PTP4A2-213ENST00000532001 UHRF1BP1LA0JNW5 1464 aa14.81□□□□□ -0.04
PTP4A2-213ENST00000532001 CTTNBP2Q8WZ74 1663 aa14.81□□□□□ -0.04
PTP4A2-213ENST00000532001 ABCC2Q92887 1545 aa14.8□□□□□ -0.04
PTP4A2-213ENST00000532001 KIAA0556O60303 1618 aa14.78□□□□□ -0.04
PTP4A2-213ENST00000532001 FAM69CQ0P6D2 419 aa14.76□□□□□ -0.05
PTP4A2-213ENST00000532001 PRXQ9BXM0 1461 aa14.75□□□□□ -0.05
PTP4A2-213ENST00000532001 UACAQ9BZF9 1416 aa14.75□□□□□ -0.05
PTP4A2-213ENST00000532001 GLI2P10070 1586 aa14.74□□□□□ -0.05
PTP4A2-213ENST00000532001 PLB1Q6P1J6 1458 aa14.73□□□□□ -0.05
PTP4A2-213ENST00000532001 KDM5BQ9UGL1 1544 aa14.72□□□□□ -0.05
PTP4A2-213ENST00000532001 SPDYE1Q8NFV5 336 aaPredicted RBP14.71□□□□□ -0.05
PTP4A2-213ENST00000532001 ASXL2Q76L83 1435 aa14.71□□□□□ -0.05
PTP4A2-213ENST00000532001 GOLGA3Q08378 1498 aa14.7□□□□□ -0.06
PTP4A2-213ENST00000532001 TSPOAP1O95153 1857 aa14.7□□□□□ -0.06
PTP4A2-213ENST00000532001 KDM6BO15054 1643 aa14.7□□□□□ -0.06
PTP4A2-213ENST00000532001 ZCCHC11Q5TAX3 1644 aaKnown RBP14.69□□□□□ -0.06
PTP4A2-213ENST00000532001 PPRC1Q5VV67 1664 aaKnown RBP14.68□□□□□ -0.06
PTP4A2-213ENST00000532001 PIP4P2Q8N4L2 257 aa14.66□□□□□ -0.06
PTP4A2-213ENST00000532001 SPDYE4A6NLX3 237 aa14.65□□□□□ -0.06
PTP4A2-213ENST00000532001 FXR2P51116 673 aaKnown RBP eCLIP14.65□□□□□ -0.06
PTP4A2-213ENST00000532001 MAP3K4Q9Y6R4 1608 aa14.65□□□□□ -0.06
PTP4A2-213ENST00000532001 TTBK1Q5TCY1 1321 aaPredicted RBP14.65□□□□□ -0.06
PTP4A2-213ENST00000532001 ABCA8O94911 1581 aa14.64□□□□□ -0.07
PTP4A2-213ENST00000532001 EPRSP07814 1512 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms