RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 TRIM44Q96DX7 344 aaPredicted RBP19.41■□□□□ 0.7
LRRK1-207ENST00000531270 MRS2Q9HD23 443 aa19.4■□□□□ 0.7
LRRK1-207ENST00000531270 ZRSR1Q15695 479 aaKnown RBP19.39■□□□□ 0.7
LRRK1-207ENST00000531270 PTMAP06454 111 aaKnown RBP19.37■□□□□ 0.69
LRRK1-207ENST00000531270 SENP3-EIF4A1A0A087X0R7 540 aa19.36■□□□□ 0.69
LRRK1-207ENST00000531270 PPP1R15AO75807 674 aaPredicted RBP19.35■□□□□ 0.69
LRRK1-207ENST00000531270 CSRNP3Q8WYN3 585 aa19.33■□□□□ 0.68
LRRK1-207ENST00000531270 HIRIP3Q9BW71 556 aaPredicted RBP19.33■□□□□ 0.68
LRRK1-207ENST00000531270 DNTTIP2Q5QJE6 756 aaKnown RBP19.32■□□□□ 0.68
LRRK1-207ENST00000531270 BECN1Q14457 450 aa19.3■□□□□ 0.68
LRRK1-207ENST00000531270 GOLGA6L22H0YM25 854 aa19.3■□□□□ 0.68
LRRK1-207ENST00000531270 NPHP1O15259 732 aa19.3■□□□□ 0.68
LRRK1-207ENST00000531270 PPM1GO15355 546 aaPredicted RBP19.28■□□□□ 0.68
LRRK1-207ENST00000531270 PLCB2Q00722 1185 aa19.25■□□□□ 0.67
LRRK1-207ENST00000531270 TNNT2P45379 298 aaPredicted RBP19.24■□□□□ 0.67
LRRK1-207ENST00000531270 TSPY4P0CV99 314 aa19.23■□□□□ 0.67
LRRK1-207ENST00000531270 TSPY10P0CW01 314 aa19.23■□□□□ 0.67
LRRK1-207ENST00000531270 LAS1LQ9Y4W2 734 aaKnown RBP19.22■□□□□ 0.67
LRRK1-207ENST00000531270 DDRGK1Q96HY6 314 aa19.21■□□□□ 0.67
LRRK1-207ENST00000531270 LMOD2Q6P5Q4 547 aa19.2■□□□□ 0.66
LRRK1-207ENST00000531270 CASC1Q6TDU7 716 aa19.2■□□□□ 0.66
LRRK1-207ENST00000531270 CLSTN1O94985 981 aa19.2■□□□□ 0.66
LRRK1-207ENST00000531270 ARID4BQ4LE39 1312 aaPredicted RBP19.17■□□□□ 0.66
LRRK1-207ENST00000531270 NAP1L2Q9ULW6 460 aaPredicted RBP19.17■□□□□ 0.66
LRRK1-207ENST00000531270 NEUROD2Q15784 382 aa19.14■□□□□ 0.65
LRRK1-207ENST00000531270 FTSJ3Q8IY81 847 aaKnown RBP19.14■□□□□ 0.65
LRRK1-207ENST00000531270 KCNH8Q96L42 1107 aa19.13■□□□□ 0.65
LRRK1-207ENST00000531270 RGL3Q3MIN7 710 aa19.13■□□□□ 0.65
LRRK1-207ENST00000531270 NAP1L5Q96NT1 182 aaPredicted RBP19.11■□□□□ 0.65
LRRK1-207ENST00000531270 ANP32EQ9BTT0 268 aa19.11■□□□□ 0.65
LRRK1-207ENST00000531270 FGD1P98174 961 aa19.1■□□□□ 0.65
LRRK1-207ENST00000531270 OS9Q13438 667 aaPredicted RBP19.09■□□□□ 0.65
LRRK1-207ENST00000531270 CFAP53Q96M91 514 aa19.09■□□□□ 0.65
LRRK1-207ENST00000531270 RTN4Q9NQC3 1192 aaKnown RBP19.09■□□□□ 0.65
LRRK1-207ENST00000531270 RRP7BPQ9NSQ0 103 aa19.08■□□□□ 0.64
LRRK1-207ENST00000531270 AMER1Q5JTC6 1135 aaPredicted RBP19.06■□□□□ 0.64
LRRK1-207ENST00000531270 GOLGA2Q08379 1002 aa19.06■□□□□ 0.64
LRRK1-207ENST00000531270 ISY1Q9ULR0 285 aaKnown RBP19.05■□□□□ 0.64
LRRK1-207ENST00000531270 EIF4G2P78344 907 aaKnown RBP eCLIP19.04■□□□□ 0.64
LRRK1-207ENST00000531270 GOLGA6L6A8MZA4 724 aa19.03■□□□□ 0.64
LRRK1-207ENST00000531270 KCNJ4P48050 445 aa19.03■□□□□ 0.64
LRRK1-207ENST00000531270 MIER1Q8N108 512 aa19.02■□□□□ 0.64
LRRK1-207ENST00000531270 RGS3P49796 1198 aa19.01■□□□□ 0.63
LRRK1-207ENST00000531270 FRAT1Q92837 279 aaPredicted RBP19.01■□□□□ 0.63
LRRK1-207ENST00000531270 CHMP7Q8WUX9 453 aaPredicted RBP19.01■□□□□ 0.63
LRRK1-207ENST00000531270 MAPK8IP3Q9UPT6 1336 aa19■□□□□ 0.63
LRRK1-207ENST00000531270 MTUS2Q5JR59 1369 aa18.99■□□□□ 0.63
LRRK1-207ENST00000531270 KNSTRNQ9Y448 316 aa18.99■□□□□ 0.63
LRRK1-207ENST00000531270 HSP90AB1P08238 724 aaKnown RBP18.99■□□□□ 0.63
LRRK1-207ENST00000531270 GOLGA6L4A6NEF3 574 aa18.92■□□□□ 0.62
LRRK1-207ENST00000531270 POGKQ9P215 609 aa18.92■□□□□ 0.62
LRRK1-207ENST00000531270 SOX12O15370 315 aa18.92■□□□□ 0.62
LRRK1-207ENST00000531270 ERICH6BQ5W0A0 696 aa18.91■□□□□ 0.62
LRRK1-207ENST00000531270 U2SURPO15042 1029 aaKnown RBP18.9■□□□□ 0.62
LRRK1-207ENST00000531270 NRDCO43847 1150 aa18.9■□□□□ 0.62
LRRK1-207ENST00000531270 PRM3Q9NNZ6 103 aa18.9■□□□□ 0.62
LRRK1-207ENST00000531270 SUPT16HQ9Y5B9 1047 aaKnown RBP18.9■□□□□ 0.62
LRRK1-207ENST00000531270 SPRYD3Q8NCJ5 442 aa18.88■□□□□ 0.61
LRRK1-207ENST00000531270 NUDCQ9Y266 331 aa18.88■□□□□ 0.61
LRRK1-207ENST00000531270 DRC7Q8IY82 874 aa18.88■□□□□ 0.61
LRRK1-207ENST00000531270 CC2D1BQ5T0F9 858 aaKnown RBP18.85■□□□□ 0.61
LRRK1-207ENST00000531270 CARD11Q9BXL7 1154 aa18.84■□□□□ 0.61
LRRK1-207ENST00000531270 CDCA8Q53HL2 280 aa18.84■□□□□ 0.61
LRRK1-207ENST00000531270 PDE4CQ08493 712 aa18.83■□□□□ 0.6
LRRK1-207ENST00000531270 CHAF1AQ13111 956 aaPredicted RBP18.82■□□□□ 0.6
LRRK1-207ENST00000531270 PNNQ9H307 717 aaKnown RBP18.82■□□□□ 0.6
LRRK1-207ENST00000531270 GNL2Q13823 731 aaKnown RBP18.82■□□□□ 0.6
LRRK1-207ENST00000531270 PLEKHD1A6NEE1 506 aa18.8■□□□□ 0.6
LRRK1-207ENST00000531270 APBB1O00213 710 aa18.77■□□□□ 0.59
LRRK1-207ENST00000531270 HSCBQ8IWL3 235 aa18.76■□□□□ 0.59
LRRK1-207ENST00000531270 NOC3LQ8WTT2 800 aaKnown RBP18.76■□□□□ 0.59
LRRK1-207ENST00000531270 ZNF330Q9Y3S2 320 aaPredicted RBP18.76■□□□□ 0.59
LRRK1-207ENST00000531270 ARID3AQ99856 593 aa18.75■□□□□ 0.59
LRRK1-207ENST00000531270 MSNP26038 577 aaKnown RBP18.75■□□□□ 0.59
LRRK1-207ENST00000531270 KIAA2012Q0VF49 1180 aa18.73■□□□□ 0.59
LRRK1-207ENST00000531270 CHMP4BQ9H444 224 aaKnown RBP18.73■□□□□ 0.59
LRRK1-207ENST00000531270 NOP58Q9Y2X3 529 aaKnown RBP18.72■□□□□ 0.59
LRRK1-207ENST00000531270 MCCP23508 829 aa18.72■□□□□ 0.59
LRRK1-207ENST00000531270 MLECQ14165 292 aa18.71■□□□□ 0.59
LRRK1-207ENST00000531270 SAFB2Q14151 953 aaKnown RBP eCLIP18.7■□□□□ 0.58
LRRK1-207ENST00000531270 L1TD1Q5T7N2 865 aaKnown RBP18.7■□□□□ 0.58
LRRK1-207ENST00000531270 ANO8Q9HCE9 1232 aaPredicted RBP18.69■□□□□ 0.58
LRRK1-207ENST00000531270 CFDP1Q9UEE9 299 aaPredicted RBP18.68■□□□□ 0.58
LRRK1-207ENST00000531270 MS4A1P11836 297 aa18.67■□□□□ 0.58
LRRK1-207ENST00000531270 TRHP20396 242 aaPredicted RBP18.67■□□□□ 0.58
LRRK1-207ENST00000531270 B4GALNT3Q6L9W6 998 aa18.67■□□□□ 0.58
LRRK1-207ENST00000531270 PPP4R2Q9NY27 417 aa18.65■□□□□ 0.58
LRRK1-207ENST00000531270 SRPK2P78362 688 aaKnown RBP18.64■□□□□ 0.58
LRRK1-207ENST00000531270 RTF1Q92541 710 aaKnown RBP18.63■□□□□ 0.57
LRRK1-207ENST00000531270 A0A0U1RQG5 324 aaPredicted RBP18.61■□□□□ 0.57
LRRK1-207ENST00000531270 KIAA1211Q6ZU35 1233 aa18.61■□□□□ 0.57
LRRK1-207ENST00000531270 HSP90B1P14625 803 aaKnown RBP18.6■□□□□ 0.57
LRRK1-207ENST00000531270 SCRIBQ14160 1630 aa18.6■□□□□ 0.57
LRRK1-207ENST00000531270 PAK3O75914 559 aaPredicted RBP18.6■□□□□ 0.57
LRRK1-207ENST00000531270 CSB-PGBD3P0DP91 1061 aa18.59■□□□□ 0.57
LRRK1-207ENST00000531270 CREBRFQ8IUR6 639 aa18.59■□□□□ 0.57
LRRK1-207ENST00000531270 TMX4Q9H1E5 349 aaPredicted RBP18.58■□□□□ 0.57
LRRK1-207ENST00000531270 CCDC9Q9Y3X0 531 aaKnown RBP18.58■□□□□ 0.56
LRRK1-207ENST00000531270 GZF1Q9H116 711 aaPredicted RBP18.57■□□□□ 0.56
LRRK1-207ENST00000531270 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms