RNA–Protein interactions for RNA: ENST00000530730.1

CHKA-205, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-205ENST00000530730 NUBP1P53384 320 aa17.96■□□□□ 0.47
CHKA-205ENST00000530730 POTEIP0CG38 1075 aa17.94■□□□□ 0.46
CHKA-205ENST00000530730 DCBLD2Q96PD2 775 aa17.91■□□□□ 0.46
CHKA-205ENST00000530730 KIF12Q96FN5 646 aa17.85■□□□□ 0.45
CHKA-205ENST00000530730 MS4A3Q96HJ5 214 aa17.83■□□□□ 0.44
CHKA-205ENST00000530730 FAM212AQ96EL1 285 aa17.82■□□□□ 0.44
CHKA-205ENST00000530730 SGIP1Q9BQI5 828 aa17.75■□□□□ 0.43
CHKA-205ENST00000530730 KLHL34Q8N239 644 aa17.74■□□□□ 0.43
CHKA-205ENST00000530730 MAP3K13O43283 966 aa17.72■□□□□ 0.43
CHKA-205ENST00000530730 NISCHQ9Y2I1 1504 aa17.71■□□□□ 0.43
CHKA-205ENST00000530730 ASTLQ6HA08 431 aaPredicted RBP17.7■□□□□ 0.42
CHKA-205ENST00000530730 IFNLR1Q8IU57 520 aaPredicted RBP17.67■□□□□ 0.42
CHKA-205ENST00000530730 DCAF8Q5TAQ9 597 aa17.64■□□□□ 0.41
CHKA-205ENST00000530730 LHX8Q68G74 356 aa17.64■□□□□ 0.41
CHKA-205ENST00000530730 ATMINO43313 823 aaPredicted RBP17.63■□□□□ 0.41
CHKA-205ENST00000530730 GSE1Q14687 1217 aa17.61■□□□□ 0.41
CHKA-205ENST00000530730 TIE1P35590 1138 aa17.6■□□□□ 0.41
CHKA-205ENST00000530730 PCDHB13Q9Y5F0 798 aa17.6■□□□□ 0.41
CHKA-205ENST00000530730 SPOCK2Q92563 424 aa17.58■□□□□ 0.4
CHKA-205ENST00000530730 PELP1Q8IZL8 1130 aaKnown RBP17.57■□□□□ 0.4
CHKA-205ENST00000530730 BMP2KQ9NSY1 1161 aaPredicted RBP17.55■□□□□ 0.4
CHKA-205ENST00000530730 TRPC6Q9Y210 931 aa17.54■□□□□ 0.4
CHKA-205ENST00000530730 IFNL1Q8IU54 200 aa17.52■□□□□ 0.4
CHKA-205ENST00000530730 SLC39A7Q92504 469 aa17.52■□□□□ 0.4
CHKA-205ENST00000530730 C7P10643 843 aa17.5■□□□□ 0.39
CHKA-205ENST00000530730 ATN1P54259 1190 aaPredicted RBP17.5■□□□□ 0.39
CHKA-205ENST00000530730 PYGBP11216 843 aa17.49■□□□□ 0.39
CHKA-205ENST00000530730 CHRM1P11229 460 aaPredicted RBP17.48■□□□□ 0.39
CHKA-205ENST00000530730 TTLL13PA6NNM8 815 aa17.46■□□□□ 0.39
CHKA-205ENST00000530730 METRNQ9UJH8 293 aa17.44■□□□□ 0.38
CHKA-205ENST00000530730 ZNF467Q7Z7K2 595 aaPredicted RBP17.37■□□□□ 0.37
CHKA-205ENST00000530730 POTEB2H3BUK9 544 aa17.34■□□□□ 0.37
CHKA-205ENST00000530730 IER5LQ5T953 404 aa17.34■□□□□ 0.37
CHKA-205ENST00000530730 TMEM106CQ9BVX2 250 aa17.33■□□□□ 0.36
CHKA-205ENST00000530730 CIZ1Q9ULV3 898 aaPredicted RBP17.33■□□□□ 0.36
CHKA-205ENST00000530730 TRIM35Q9UPQ4 493 aa17.33■□□□□ 0.36
CHKA-205ENST00000530730 PCDHB8Q9UN66 801 aa17.32■□□□□ 0.36
CHKA-205ENST00000530730 TRIM41Q8WV44 630 aa17.3■□□□□ 0.36
CHKA-205ENST00000530730 POTEFA5A3E0 1075 aa17.25■□□□□ 0.35
CHKA-205ENST00000530730 OTUD5Q96G74 571 aa17.22■□□□□ 0.35
CHKA-205ENST00000530730 SEC24BO95487 1268 aa17.17■□□□□ 0.34
CHKA-205ENST00000530730 MAMSTRQ6ZN01 415 aa17.17■□□□□ 0.34
CHKA-205ENST00000530730 COLQQ9Y215 455 aaPredicted RBP17.17■□□□□ 0.34
CHKA-205ENST00000530730 POTEJP0CG39 1038 aa17.16■□□□□ 0.34
CHKA-205ENST00000530730 PDAP1Q13442 181 aaKnown RBP17.15■□□□□ 0.34
CHKA-205ENST00000530730 PSEN1P49768 467 aa17.14■□□□□ 0.33
CHKA-205ENST00000530730 IRX5P78411 483 aaPredicted RBP17.12■□□□□ 0.33
CHKA-205ENST00000530730 PLCG2P16885 1265 aa17.06■□□□□ 0.32
CHKA-205ENST00000530730 SCUBE2Q9NQ36 999 aa17.05■□□□□ 0.32
CHKA-205ENST00000530730 OCEL1Q9H607 264 aa17.04■□□□□ 0.32
CHKA-205ENST00000530730 GOLGA2Q08379 1002 aa17.01■□□□□ 0.31
CHKA-205ENST00000530730 MKRN3Q13064 507 aaKnown RBP16.99■□□□□ 0.31
CHKA-205ENST00000530730 RIOK3O14730 519 aaKnown RBP16.97■□□□□ 0.31
CHKA-205ENST00000530730 RNF25Q96BH1 459 aaPredicted RBP16.96■□□□□ 0.31
CHKA-205ENST00000530730 ILDR1Q86SU0 546 aaPredicted RBP16.94■□□□□ 0.3
CHKA-205ENST00000530730 PDCD7Q8N8D1 485 aaKnown RBP16.93■□□□□ 0.3
CHKA-205ENST00000530730 VGFO15240 615 aaPredicted RBP16.9■□□□□ 0.3
CHKA-205ENST00000530730 CABP2Q9NPB3 220 aa16.9■□□□□ 0.3
CHKA-205ENST00000530730 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.87■□□□□ 0.294e-12■□□□□ 10.5
CHKA-205ENST00000530730 TAOK2Q9UL54 1235 aa16.85■□□□□ 0.29
CHKA-205ENST00000530730 PKD2Q13563 968 aa16.84■□□□□ 0.29
CHKA-205ENST00000530730 ECM2O94769 699 aaPredicted RBP16.81■□□□□ 0.28
CHKA-205ENST00000530730 L3MBTL3Q96JM7 780 aaPredicted RBP16.81■□□□□ 0.28
CHKA-205ENST00000530730 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.8■□□□□ 0.28
CHKA-205ENST00000530730 ZFP91Q96JP5 570 aaPredicted RBP16.8■□□□□ 0.28
CHKA-205ENST00000530730 EFCAB3Q8N7B9 438 aa16.75■□□□□ 0.27
CHKA-205ENST00000530730 SLAIN1Q8ND83 568 aa16.74■□□□□ 0.27
CHKA-205ENST00000530730 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.72■□□□□ 0.27
CHKA-205ENST00000530730 SOX12O15370 315 aa16.71■□□□□ 0.27
CHKA-205ENST00000530730 RGL2O15211 777 aa16.67■□□□□ 0.26
CHKA-205ENST00000530730 DPY19L2Q6NUT2 758 aa16.66■□□□□ 0.26
CHKA-205ENST00000530730 C3orf67Q6ZVT6 689 aa16.66■□□□□ 0.26
CHKA-205ENST00000530730 BCL11BQ9C0K0 894 aaPredicted RBP16.65■□□□□ 0.26
CHKA-205ENST00000530730 LCE2DQ5TA82 110 aaPredicted RBP16.63■□□□□ 0.25
CHKA-205ENST00000530730 BOLA1Q9Y3E2 137 aa16.63■□□□□ 0.25
CHKA-205ENST00000530730 TMEM121BQ9BXQ6 578 aaPredicted RBP16.6■□□□□ 0.25
CHKA-205ENST00000530730 G3V3G9 751 aa16.58■□□□□ 0.24
CHKA-205ENST00000530730 STK25O00506 426 aa16.58■□□□□ 0.24
CHKA-205ENST00000530730 FAM163AQ96GL9 167 aaPredicted RBP16.58■□□□□ 0.24
CHKA-205ENST00000530730 STK24Q9Y6E0 443 aa16.58■□□□□ 0.24
CHKA-205ENST00000530730 POTEMA6NI47 508 aa16.56■□□□□ 0.24
CHKA-205ENST00000530730 PHF8Q9UPP1 1060 aa16.55■□□□□ 0.24
CHKA-205ENST00000530730 SNPHO15079 494 aa16.54■□□□□ 0.24
CHKA-205ENST00000530730 POTEGQ6S5H5 508 aa16.54■□□□□ 0.24
CHKA-205ENST00000530730 MS4A4AQ96JQ5 239 aa16.54■□□□□ 0.24
CHKA-205ENST00000530730 NLRP6P59044 892 aa16.53■□□□□ 0.24
CHKA-205ENST00000530730 FBXO22Q8NEZ5 403 aa16.5■□□□□ 0.23
CHKA-205ENST00000530730 MICALL2Q8IY33 904 aa16.46■□□□□ 0.23
CHKA-205ENST00000530730 MFRPQ9BY79 579 aa16.46■□□□□ 0.23
CHKA-205ENST00000530730 ST18O60284 1047 aa16.44■□□□□ 0.22
CHKA-205ENST00000530730 PCDH10Q9P2E7 1040 aa16.42■□□□□ 0.22
CHKA-205ENST00000530730 HS6ST3Q8IZP7 471 aa16.41■□□□□ 0.22
CHKA-205ENST00000530730 DNAJC5Q9H3Z4 198 aa16.33■□□□□ 0.2
CHKA-205ENST00000530730 TMEM92Q6UXU6 159 aa16.3■□□□□ 0.2
CHKA-205ENST00000530730 HOXB3P14651 431 aaPredicted RBP16.27■□□□□ 0.2
CHKA-205ENST00000530730 CHGAP10645 457 aaKnown RBP16.25■□□□□ 0.19
CHKA-205ENST00000530730 DOK7Q18PE1 504 aa16.23■□□□□ 0.19
CHKA-205ENST00000530730 KIF3CO14782 793 aa16.15■□□□□ 0.18
CHKA-205ENST00000530730 RIMBP2O15034 1052 aa16.15■□□□□ 0.18
CHKA-205ENST00000530730 CDAN1Q8IWY9 1227 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms