RNA–Protein interactions for RNA: ENST00000530730.1

CHKA-205, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-205ENST00000530730 AEBP2Q6ZN18 517 aaPredicted RBP35.99■■■■□ 3.35
CHKA-205ENST00000530730 CHIC1Q5VXU3 224 aa34.62■■■■□ 3.13
CHKA-205ENST00000530730 SENP3Q9H4L4 574 aaPredicted RBP30.73■■■□□ 2.51
CHKA-205ENST00000530730 PHF23Q9BUL5 403 aaPredicted RBP30.32■■■□□ 2.44
CHKA-205ENST00000530730 FOXD1Q16676 465 aa28.52■■■□□ 2.16
CHKA-205ENST00000530730 PLPPR3Q6T4P5 718 aa27.85■■■□□ 2.05
CHKA-205ENST00000530730 PPP6R1Q9UPN7 881 aa26.93■■□□□ 1.9
CHKA-205ENST00000530730 ADRA2BP18089 450 aa26.84■■□□□ 1.89
CHKA-205ENST00000530730 PIAS4Q8N2W9 510 aaPredicted RBP26.73■■□□□ 1.87
CHKA-205ENST00000530730 MSH5O43196 834 aa26.63■■□□□ 1.85
CHKA-205ENST00000530730 POTEDQ86YR6 584 aa25.26■■□□□ 1.63
CHKA-205ENST00000530730 SCAF1Q9H7N4 1312 aaKnown RBP24.69■■□□□ 1.54
CHKA-205ENST00000530730 MAPK8IP2Q13387 824 aaPredicted RBP24.51■■□□□ 1.51
CHKA-205ENST00000530730 DMRT2Q9Y5R5 561 aa24.43■■□□□ 1.5
CHKA-205ENST00000530730 PPP4R3CPQ6ZMV5 832 aa24.41■■□□□ 1.5
CHKA-205ENST00000530730 CNKSR2Q8WXI2 1034 aa23.92■■□□□ 1.42
CHKA-205ENST00000530730 HOXD11P31277 338 aaPredicted RBP23.71■■□□□ 1.39
CHKA-205ENST00000530730 NCBP3Q53F19 620 aaKnown RBP23.64■■□□□ 1.37
CHKA-205ENST00000530730 RNF216Q9NWF9 866 aaPredicted RBP23.63■■□□□ 1.37
CHKA-205ENST00000530730 NPM3O75607 178 aaKnown RBP23.25■■□□□ 1.31
CHKA-205ENST00000530730 DCAF8L1A6NGE4 600 aa23.23■■□□□ 1.31
CHKA-205ENST00000530730 KCNA4P22459 653 aa23.1■■□□□ 1.29
CHKA-205ENST00000530730 DNAJC5BQ9UF47 199 aa22.95■■□□□ 1.26
CHKA-205ENST00000530730 RNF39Q9H2S5 420 aa22.74■■□□□ 1.23
CHKA-205ENST00000530730 CACNB1Q02641 598 aaPredicted RBP22.51■■□□□ 1.19
CHKA-205ENST00000530730 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.48■■□□□ 1.194e-7■■■□□ 15.8
CHKA-205ENST00000530730 C1QBPQ07021 282 aaKnown RBP22.47■■□□□ 1.19
CHKA-205ENST00000530730 SLC4A2P04920 1241 aa22.11■■□□□ 1.13
CHKA-205ENST00000530730 U3KPZ7 1027 aaPredicted RBP22.09■■□□□ 1.13
CHKA-205ENST00000530730 SLC4A1APQ9BWU0 796 aaKnown RBP21.9■■□□□ 1.1
CHKA-205ENST00000530730 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.68■■□□□ 1.06
CHKA-205ENST00000530730 HNRNPUL2Q1KMD3 747 aaKnown RBP21.68■■□□□ 1.06
CHKA-205ENST00000530730 APLP2Q06481 763 aa21.61■■□□□ 1.05
CHKA-205ENST00000530730 SPINK5Q9NQ38 1064 aaPredicted RBP21.59■■□□□ 1.05
CHKA-205ENST00000530730 SAMD1Q6SPF0 538 aaPredicted RBP21.55■■□□□ 1.04
CHKA-205ENST00000530730 MYCNP04198 464 aaPredicted RBP21.54■■□□□ 1.04
CHKA-205ENST00000530730 CAPN15O75808 1086 aa21.53■■□□□ 1.04
CHKA-205ENST00000530730 FOXD4L1Q9NU39 408 aa21.51■■□□□ 1.03
CHKA-205ENST00000530730 DSG3P32926 999 aa21.4■■□□□ 1.02
CHKA-205ENST00000530730 ZNF219Q9P2Y4 722 aaPredicted RBP21.37■■□□□ 1.01
CHKA-205ENST00000530730 TRHP20396 242 aaPredicted RBP21.26■□□□□ 0.99
CHKA-205ENST00000530730 ZBTB22O15209 634 aa21.24■□□□□ 0.99
CHKA-205ENST00000530730 ABCB7O75027 752 aa21.02■□□□□ 0.96
CHKA-205ENST00000530730 ATF5Q9Y2D1 282 aaPredicted RBP20.9■□□□□ 0.94
CHKA-205ENST00000530730 ATXN8OSP0DMR3 200 aa20.89■□□□□ 0.93
CHKA-205ENST00000530730 POLA2Q14181 598 aa20.83■□□□□ 0.93
CHKA-205ENST00000530730 CSRNP3Q8WYN3 585 aa20.63■□□□□ 0.89
CHKA-205ENST00000530730 ZBTB12Q9Y330 459 aaPredicted RBP20.55■□□□□ 0.88
CHKA-205ENST00000530730 RBM42Q9BTD8 480 aaKnown RBP20.48■□□□□ 0.87
CHKA-205ENST00000530730 EHMT2Q96KQ7 1210 aa20.46■□□□□ 0.87
CHKA-205ENST00000530730 FBLN2P98095 1184 aa20.14■□□□□ 0.81
CHKA-205ENST00000530730 OSCARQ8IYS5 282 aa20.13■□□□□ 0.81
CHKA-205ENST00000530730 AKT1S1Q96B36 256 aa20.06■□□□□ 0.8
CHKA-205ENST00000530730 MKRN4PQ13434 485 aaPredicted RBP20.01■□□□□ 0.79
CHKA-205ENST00000530730 SPDYE2BA6NHP3 402 aa19.93■□□□□ 0.78
CHKA-205ENST00000530730 SPDYE6P0CI01 402 aa19.93■□□□□ 0.78
CHKA-205ENST00000530730 SPDYE2Q495Y8 402 aa19.93■□□□□ 0.78
CHKA-205ENST00000530730 POTEHQ6S545 545 aa19.88■□□□□ 0.77
CHKA-205ENST00000530730 REM2Q8IYK8 340 aaPredicted RBP19.81■□□□□ 0.76
CHKA-205ENST00000530730 CHRDL2Q6WN34 429 aa19.8■□□□□ 0.76
CHKA-205ENST00000530730 SSUH2Q9Y2M2 353 aa19.71■□□□□ 0.75
CHKA-205ENST00000530730 ZNF692Q9BU19 519 aaPredicted RBP19.67■□□□□ 0.74
CHKA-205ENST00000530730 PITPNM1O00562 1244 aa19.58■□□□□ 0.72
CHKA-205ENST00000530730 SPDYE1Q8NFV5 336 aaPredicted RBP19.46■□□□□ 0.71
CHKA-205ENST00000530730 FXR2P51116 673 aaKnown RBP eCLIP19.4■□□□□ 0.7
CHKA-205ENST00000530730 PIP4P2Q8N4L2 257 aa19.39■□□□□ 0.69
CHKA-205ENST00000530730 PABPN1Q86U42 306 aaKnown RBP eCLIP19.38■□□□□ 0.69
CHKA-205ENST00000530730 CLEC11AQ9Y240 323 aa19.29■□□□□ 0.68
CHKA-205ENST00000530730 SPDYE4A6NLX3 237 aa19.26■□□□□ 0.67
CHKA-205ENST00000530730 PRR29P0C7W0 189 aa19.09■□□□□ 0.65
CHKA-205ENST00000530730 PRKAR2AP13861 404 aaKnown RBP19.07■□□□□ 0.64
CHKA-205ENST00000530730 STAG3Q9UJ98 1225 aa19.03■□□□□ 0.64
CHKA-205ENST00000530730 PROM2Q8N271 834 aa18.97■□□□□ 0.63
CHKA-205ENST00000530730 HAX1O00165 279 aa18.89■□□□□ 0.61
CHKA-205ENST00000530730 CHADLQ6NUI6 762 aa18.87■□□□□ 0.61
CHKA-205ENST00000530730 SP7Q8TDD2 431 aaPredicted RBP18.83■□□□□ 0.6
CHKA-205ENST00000530730 C19orf67A6NJJ6 358 aa18.75■□□□□ 0.59
CHKA-205ENST00000530730 FARP1Q9Y4F1 1045 aaPredicted RBP18.73■□□□□ 0.59
CHKA-205ENST00000530730 CREBZFQ9NS37 354 aa18.72■□□□□ 0.59
CHKA-205ENST00000530730 EVX2Q03828 476 aa18.68■□□□□ 0.58
CHKA-205ENST00000530730 FKBP8Q14318 412 aa18.64■□□□□ 0.57
CHKA-205ENST00000530730 CD44P16070 742 aaKnown RBP18.49■□□□□ 0.55
CHKA-205ENST00000530730 MNX1P50219 401 aaPredicted RBP18.48■□□□□ 0.55
CHKA-205ENST00000530730 NPM1P06748 294 aaKnown RBP eCLIP18.42■□□□□ 0.54
CHKA-205ENST00000530730 CLCN6P51797 869 aa18.36■□□□□ 0.53
CHKA-205ENST00000530730 GABBR2O75899 941 aa18.34■□□□□ 0.53
CHKA-205ENST00000530730 PLEKHG5O94827 1062 aa18.32■□□□□ 0.52
CHKA-205ENST00000530730 ZNF579Q8NAF0 562 aaKnown RBP18.3■□□□□ 0.52
CHKA-205ENST00000530730 MIER1Q8N108 512 aa18.29■□□□□ 0.52
CHKA-205ENST00000530730 ZRANB1Q9UGI0 708 aa18.27■□□□□ 0.52
CHKA-205ENST00000530730 FBXO3Q9UK99 471 aa18.27■□□□□ 0.52
CHKA-205ENST00000530730 PAK3O75914 559 aaPredicted RBP18.26■□□□□ 0.51
CHKA-205ENST00000530730 PLCD3Q8N3E9 789 aa18.2■□□□□ 0.5
CHKA-205ENST00000530730 ZBTB47Q9UFB7 747 aaPredicted RBP18.16■□□□□ 0.5
CHKA-205ENST00000530730 PHF12Q96QT6 1004 aa18.02■□□□□ 0.48
CHKA-205ENST00000530730 CCDC61Q9Y6R9 512 aa18■□□□□ 0.47
CHKA-205ENST00000530730 RASEFQ8IZ41 740 aa17.99■□□□□ 0.47
CHKA-205ENST00000530730 TSPYL2Q9H2G4 693 aaPredicted RBP17.99■□□□□ 0.47
CHKA-205ENST00000530730 VASPP50552 380 aaPredicted RBP17.98■□□□□ 0.47
CHKA-205ENST00000530730 GALR2O43603 387 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms