RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 CEP164Q9UPV0 1460 aa20.63■□□□□ 0.89
PCDHA4-203ENST00000530339 WRNQ14191 1432 aaPredicted RBP eCLIP20.62■□□□□ 0.89
PCDHA4-203ENST00000530339 HIRIP3Q9BW71 556 aaPredicted RBP20.62■□□□□ 0.89
PCDHA4-203ENST00000530339 EIF4G2P78344 907 aaKnown RBP eCLIP20.59■□□□□ 0.89
PCDHA4-203ENST00000530339 CHIC2Q9UKJ5 165 aa20.58■□□□□ 0.88
PCDHA4-203ENST00000530339 KIF27Q86VH2 1401 aa20.55■□□□□ 0.88
PCDHA4-203ENST00000530339 CHGAP10645 457 aaKnown RBP20.55■□□□□ 0.88
PCDHA4-203ENST00000530339 BAZ1BQ9UIG0 1483 aaKnown RBP20.53■□□□□ 0.88
PCDHA4-203ENST00000530339 BAZ1AQ9NRL2 1556 aaPredicted RBP20.53■□□□□ 0.88
PCDHA4-203ENST00000530339 SUPT16HQ9Y5B9 1047 aaKnown RBP20.53■□□□□ 0.88
PCDHA4-203ENST00000530339 WDR43Q15061 677 aaKnown RBP eCLIP20.52■□□□□ 0.88
PCDHA4-203ENST00000530339 DDRGK1Q96HY6 314 aa20.49■□□□□ 0.87
PCDHA4-203ENST00000530339 PLPPR3Q6T4P5 718 aa20.47■□□□□ 0.87
PCDHA4-203ENST00000530339 CHMP7Q8WUX9 453 aaPredicted RBP20.45■□□□□ 0.86
PCDHA4-203ENST00000530339 ARXQ96QS3 562 aa20.4■□□□□ 0.86
PCDHA4-203ENST00000530339 PPP4R2Q9NY27 417 aa20.4■□□□□ 0.86
PCDHA4-203ENST00000530339 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.39■□□□□ 0.85
PCDHA4-203ENST00000530339 KDM2AQ9Y2K7 1162 aa20.38■□□□□ 0.85
PCDHA4-203ENST00000530339 CDCA8Q53HL2 280 aa20.37■□□□□ 0.85
PCDHA4-203ENST00000530339 PLEKHD1A6NEE1 506 aa20.36■□□□□ 0.85
PCDHA4-203ENST00000530339 BECN1Q14457 450 aa20.36■□□□□ 0.85
PCDHA4-203ENST00000530339 PPM1GO15355 546 aaPredicted RBP20.36■□□□□ 0.85
PCDHA4-203ENST00000530339 FHAD1B1AJZ9 1412 aa20.35■□□□□ 0.85
PCDHA4-203ENST00000530339 TIMELESSQ9UNS1 1208 aa20.35■□□□□ 0.85
PCDHA4-203ENST00000530339 RRP7BPQ9NSQ0 103 aa20.34■□□□□ 0.85
PCDHA4-203ENST00000530339 NOP58Q9Y2X3 529 aaKnown RBP20.31■□□□□ 0.84
PCDHA4-203ENST00000530339 MYH16Q9H6N6 1097 aa20.27■□□□□ 0.84
PCDHA4-203ENST00000530339 SIN3AQ96ST3 1273 aa20.25■□□□□ 0.83
PCDHA4-203ENST00000530339 TRIM44Q96DX7 344 aaPredicted RBP20.23■□□□□ 0.83
PCDHA4-203ENST00000530339 CCER2I3L3R5 266 aa20.23■□□□□ 0.83
PCDHA4-203ENST00000530339 CFDP1Q9UEE9 299 aaPredicted RBP20.23■□□□□ 0.83
PCDHA4-203ENST00000530339 RBM19Q9Y4C8 960 aaKnown RBP20.22■□□□□ 0.83
PCDHA4-203ENST00000530339 ERICH6BQ5W0A0 696 aa20.22■□□□□ 0.83
PCDHA4-203ENST00000530339 CCNB3Q8WWL7 1395 aa20.21■□□□□ 0.83
PCDHA4-203ENST00000530339 CFAP53Q96M91 514 aa20.2■□□□□ 0.82
PCDHA4-203ENST00000530339 PPP1R15AO75807 674 aaPredicted RBP20.18■□□□□ 0.82
PCDHA4-203ENST00000530339 B4GALNT3Q6L9W6 998 aa20.18■□□□□ 0.82
PCDHA4-203ENST00000530339 LAS1LQ9Y4W2 734 aaKnown RBP20.17■□□□□ 0.82
PCDHA4-203ENST00000530339 GOLGA6L22H0YM25 854 aa20.15■□□□□ 0.82
PCDHA4-203ENST00000530339 KNSTRNQ9Y448 316 aa20.14■□□□□ 0.82
PCDHA4-203ENST00000530339 SENP3-EIF4A1A0A087X0R7 540 aa20.14■□□□□ 0.81
PCDHA4-203ENST00000530339 VPS8Q8N3P4 1428 aa20.13■□□□□ 0.81
PCDHA4-203ENST00000530339 C14orf37Q86TY3 774 aa20.13■□□□□ 0.81
PCDHA4-203ENST00000530339 CARD11Q9BXL7 1154 aa20.12■□□□□ 0.81
PCDHA4-203ENST00000530339 DEKP35659 375 aaKnown RBP20.11■□□□□ 0.81
PCDHA4-203ENST00000530339 CARMIL1Q5VZK9 1371 aa20.1■□□□□ 0.81
PCDHA4-203ENST00000530339 RTN4Q9NQC3 1192 aaKnown RBP20.1■□□□□ 0.81
PCDHA4-203ENST00000530339 CECR2Q9BXF3 1484 aa20.09■□□□□ 0.81
PCDHA4-203ENST00000530339 ARID4BQ4LE39 1312 aaPredicted RBP20.08■□□□□ 0.8
PCDHA4-203ENST00000530339 TSHZ2Q9NRE2 1034 aa20.07■□□□□ 0.8
PCDHA4-203ENST00000530339 SMARCA2P51531 1590 aa20.07■□□□□ 0.8
PCDHA4-203ENST00000530339 A0A0G2JS52 829 aa20.06■□□□□ 0.8
PCDHA4-203ENST00000530339 CHMP4BQ9H444 224 aaKnown RBP20.06■□□□□ 0.8
PCDHA4-203ENST00000530339 SETD5Q9C0A6 1442 aa20.04■□□□□ 0.8
PCDHA4-203ENST00000530339 HAP1P54257 671 aaPredicted RBP20.04■□□□□ 0.8
PCDHA4-203ENST00000530339 NCLP19338 710 aaKnown RBP20.04■□□□□ 0.8
PCDHA4-203ENST00000530339 CUX2O14529 1486 aa20.04■□□□□ 0.8
PCDHA4-203ENST00000530339 RGL3Q3MIN7 710 aa20.04■□□□□ 0.8
PCDHA4-203ENST00000530339 KCNH8Q96L42 1107 aa20.03■□□□□ 0.8
PCDHA4-203ENST00000530339 SOGA1O94964 1423 aa20.03■□□□□ 0.8
PCDHA4-203ENST00000530339 MS4A1P11836 297 aa20.03■□□□□ 0.8
PCDHA4-203ENST00000530339 RGS3P49796 1198 aa20.03■□□□□ 0.8
PCDHA4-203ENST00000530339 ARHGAP35Q9NRY4 1499 aa20.02■□□□□ 0.8
PCDHA4-203ENST00000530339 NUDCQ9Y266 331 aa20■□□□□ 0.79
PCDHA4-203ENST00000530339 CCDC88BA6NC98 1476 aa19.99■□□□□ 0.79
PCDHA4-203ENST00000530339 NAP1L5Q96NT1 182 aaPredicted RBP19.98■□□□□ 0.79
PCDHA4-203ENST00000530339 CASC1Q6TDU7 716 aa19.97■□□□□ 0.79
PCDHA4-203ENST00000530339 PNNQ9H307 717 aaKnown RBP19.97■□□□□ 0.79
PCDHA4-203ENST00000530339 FTSJ3Q8IY81 847 aaKnown RBP19.96■□□□□ 0.79
PCDHA4-203ENST00000530339 ERCC6Q03468 1493 aa19.96■□□□□ 0.79
PCDHA4-203ENST00000530339 MROH2BQ7Z745 1585 aa19.96■□□□□ 0.79
PCDHA4-203ENST00000530339 KANK1Q14678 1352 aa19.94■□□□□ 0.78
PCDHA4-203ENST00000530339 TOP2AP11388 1531 aaKnown RBP19.94■□□□□ 0.78
PCDHA4-203ENST00000530339 FMN1Q68DA7 1419 aa19.94■□□□□ 0.78
PCDHA4-203ENST00000530339 MAPK8IP3Q9UPT6 1336 aa19.93■□□□□ 0.78
PCDHA4-203ENST00000530339 TMF1P82094 1093 aa19.93■□□□□ 0.78
PCDHA4-203ENST00000530339 TNNT2P45379 298 aaPredicted RBP19.93■□□□□ 0.78
PCDHA4-203ENST00000530339 PTMAP06454 111 aaKnown RBP19.93■□□□□ 0.78
PCDHA4-203ENST00000530339 ZBTB7CA1YPR0 619 aa19.91■□□□□ 0.78
PCDHA4-203ENST00000530339 HSPA5P11021 654 aaKnown RBP19.91■□□□□ 0.78
PCDHA4-203ENST00000530339 FRAT1Q92837 279 aaPredicted RBP19.88■□□□□ 0.77
PCDHA4-203ENST00000530339 NEUROD2Q15784 382 aa19.87■□□□□ 0.77
PCDHA4-203ENST00000530339 L1TD1Q5T7N2 865 aaKnown RBP19.87■□□□□ 0.77
PCDHA4-203ENST00000530339 EIF4G1Q04637 1599 aaKnown RBP19.87■□□□□ 0.77
PCDHA4-203ENST00000530339 DNTTIP2Q5QJE6 756 aaKnown RBP19.86■□□□□ 0.77
PCDHA4-203ENST00000530339 CC2D1BQ5T0F9 858 aaKnown RBP19.86■□□□□ 0.77
PCDHA4-203ENST00000530339 KANK4Q5T7N3 995 aaPredicted RBP19.86■□□□□ 0.77
PCDHA4-203ENST00000530339 RAB3GAP2Q9H2M9 1393 aa19.85■□□□□ 0.77
PCDHA4-203ENST00000530339 CARMIL2Q6F5E8 1435 aa19.84■□□□□ 0.77
PCDHA4-203ENST00000530339 TCERG1O14776 1098 aaKnown RBP19.83■□□□□ 0.77
PCDHA4-203ENST00000530339 CFAP44Q96MT7 982 aa19.83■□□□□ 0.77
PCDHA4-203ENST00000530339 PDS5BQ9NTI5 1447 aa19.82■□□□□ 0.76
PCDHA4-203ENST00000530339 HSP90AB1P08238 724 aaKnown RBP19.81■□□□□ 0.76
PCDHA4-203ENST00000530339 TRHP20396 242 aaPredicted RBP19.81■□□□□ 0.76
PCDHA4-203ENST00000530339 ABCC8Q09428 1581 aa19.81■□□□□ 0.76
PCDHA4-203ENST00000530339 HDGFP51858 240 aaKnown RBP19.8■□□□□ 0.76
PCDHA4-203ENST00000530339 POGKQ9P215 609 aa19.8■□□□□ 0.76
PCDHA4-203ENST00000530339 IPO9Q96P70 1041 aaKnown RBP19.78■□□□□ 0.76
PCDHA4-203ENST00000530339 CDK11BP21127 795 aaKnown RBP19.77■□□□□ 0.76
PCDHA4-203ENST00000530339 DCAF11Q8TEB1 546 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms