RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 DEKP35659 375 aaKnown RBP10.13□□□□□ -0.79
CTNND1-223ENST00000529986 TPRNQ4KMQ1 711 aa10.13□□□□□ -0.79
CTNND1-223ENST00000529986 BECN1Q14457 450 aa10.12□□□□□ -0.79
CTNND1-223ENST00000529986 NOP58Q9Y2X3 529 aaKnown RBP10.12□□□□□ -0.79
CTNND1-223ENST00000529986 WDR43Q15061 677 aaKnown RBP eCLIP10.12□□□□□ -0.793e-9■■■□□ 15.6
CTNND1-223ENST00000529986 CHIC2Q9UKJ5 165 aa10.11□□□□□ -0.79
CTNND1-223ENST00000529986 AMER1Q5JTC6 1135 aaPredicted RBP10.11□□□□□ -0.79
CTNND1-223ENST00000529986 DNTTIP2Q5QJE6 756 aaKnown RBP10.1□□□□□ -0.79
CTNND1-223ENST00000529986 MYO15BQ96JP2 1530 aa10.1□□□□□ -0.79
CTNND1-223ENST00000529986 PTMAP06454 111 aaKnown RBP10.1□□□□□ -0.79
CTNND1-223ENST00000529986 ARID4BQ4LE39 1312 aaPredicted RBP10.09□□□□□ -0.79
CTNND1-223ENST00000529986 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.09□□□□□ -0.79
CTNND1-223ENST00000529986 PPM1GO15355 546 aaPredicted RBP10.09□□□□□ -0.79
CTNND1-223ENST00000529986 EEA1Q15075 1411 aa10.09□□□□□ -0.79
CTNND1-223ENST00000529986 CHGAP10645 457 aaKnown RBP10.09□□□□□ -0.79
CTNND1-223ENST00000529986 KDM2AQ9Y2K7 1162 aa10.08□□□□□ -0.8
CTNND1-223ENST00000529986 B4GALNT3Q6L9W6 998 aa10.06□□□□□ -0.8
CTNND1-223ENST00000529986 BAZ1AQ9NRL2 1556 aaPredicted RBP10.05□□□□□ -0.8
CTNND1-223ENST00000529986 GOLGA6L22H0YM25 854 aa10.05□□□□□ -0.8
CTNND1-223ENST00000529986 ESF1Q9H501 851 aaKnown RBP10.05□□□□□ -0.8
CTNND1-223ENST00000529986 NPM1P06748 294 aaKnown RBP eCLIP10.04□□□□□ -0.8
CTNND1-223ENST00000529986 RBM19Q9Y4C8 960 aaKnown RBP10.04□□□□□ -0.8
CTNND1-223ENST00000529986 RGS3P49796 1198 aa10.03□□□□□ -0.8
CTNND1-223ENST00000529986 GOLGA3Q08378 1498 aa10.03□□□□□ -0.8
CTNND1-223ENST00000529986 PPP4R2Q9NY27 417 aa10.03□□□□□ -0.8
CTNND1-223ENST00000529986 CDK11BP21127 795 aaKnown RBP10.02□□□□□ -0.81
CTNND1-223ENST00000529986 PLCB2Q00722 1185 aa10.01□□□□□ -0.81
CTNND1-223ENST00000529986 MYH16Q9H6N6 1097 aa10.01□□□□□ -0.81
CTNND1-223ENST00000529986 BAZ1BQ9UIG0 1483 aaKnown RBP10.01□□□□□ -0.81
CTNND1-223ENST00000529986 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.01□□□□□ -0.811e-8■■□□□ 13.5
CTNND1-223ENST00000529986 EIF4G2P78344 907 aaKnown RBP eCLIP10.01□□□□□ -0.81
CTNND1-223ENST00000529986 CLIP1P30622 1438 aa10□□□□□ -0.81
CTNND1-223ENST00000529986 ARID3AQ99856 593 aa9.99□□□□□ -0.81
CTNND1-223ENST00000529986 WRNQ14191 1432 aaPredicted RBP eCLIP9.99□□□□□ -0.81
CTNND1-223ENST00000529986 CEP162Q5TB80 1403 aa9.97□□□□□ -0.81
CTNND1-223ENST00000529986 ZBTB7CA1YPR0 619 aa9.97□□□□□ -0.81
CTNND1-223ENST00000529986 SENP3Q9H4L4 574 aaPredicted RBP9.97□□□□□ -0.81
CTNND1-223ENST00000529986 SPRYD3Q8NCJ5 442 aa9.96□□□□□ -0.81
CTNND1-223ENST00000529986 STAG3Q9UJ98 1225 aa9.94□□□□□ -0.82
CTNND1-223ENST00000529986 CEP164Q9UPV0 1460 aa9.94□□□□□ -0.82
CTNND1-223ENST00000529986 RRP7BPQ9NSQ0 103 aa9.94□□□□□ -0.82
CTNND1-223ENST00000529986 TNIKQ9UKE5 1360 aa9.94□□□□□ -0.82
CTNND1-223ENST00000529986 PLPPR3Q6T4P5 718 aa9.93□□□□□ -0.82
CTNND1-223ENST00000529986 TSHZ2Q9NRE2 1034 aa9.93□□□□□ -0.82
CTNND1-223ENST00000529986 NEUROD2Q15784 382 aa9.93□□□□□ -0.82
CTNND1-223ENST00000529986 CECR2Q9BXF3 1484 aa9.93□□□□□ -0.82
CTNND1-223ENST00000529986 HSP90AB1P08238 724 aaKnown RBP9.91□□□□□ -0.82
CTNND1-223ENST00000529986 ZRSR1Q15695 479 aaKnown RBP9.91□□□□□ -0.82
CTNND1-223ENST00000529986 FRAT1Q92837 279 aaPredicted RBP9.91□□□□□ -0.82
CTNND1-223ENST00000529986 TAOK2Q9UL54 1235 aa9.91□□□□□ -0.82
CTNND1-223ENST00000529986 MSNP26038 577 aaKnown RBP9.9□□□□□ -0.82
CTNND1-223ENST00000529986 FTSJ3Q8IY81 847 aaKnown RBP9.9□□□□□ -0.82
CTNND1-223ENST00000529986 SIN3AQ96ST3 1273 aa9.9□□□□□ -0.82
CTNND1-223ENST00000529986 KIF27Q86VH2 1401 aa9.89□□□□□ -0.83
CTNND1-223ENST00000529986 GZF1Q9H116 711 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-223ENST00000529986 PLEKHG5O94827 1062 aa9.89□□□□□ -0.83
CTNND1-223ENST00000529986 L1TD1Q5T7N2 865 aaKnown RBP9.88□□□□□ -0.83
CTNND1-223ENST00000529986 MTUS2Q5JR59 1369 aa9.88□□□□□ -0.83
CTNND1-223ENST00000529986 RGL3Q3MIN7 710 aa9.87□□□□□ -0.83
CTNND1-223ENST00000529986 MROH2BQ7Z745 1585 aa9.87□□□□□ -0.83
CTNND1-223ENST00000529986 CASC1Q6TDU7 716 aa9.86□□□□□ -0.83
CTNND1-223ENST00000529986 PNNQ9H307 717 aaKnown RBP9.85□□□□□ -0.83
CTNND1-223ENST00000529986 TULP1O00294 542 aaPredicted RBP9.85□□□□□ -0.83
CTNND1-223ENST00000529986 CHAF1AQ13111 956 aaPredicted RBP9.84□□□□□ -0.83
CTNND1-223ENST00000529986 SLKQ9H2G2 1235 aaPredicted RBP9.84□□□□□ -0.83
CTNND1-223ENST00000529986 HSCBQ8IWL3 235 aa9.83□□□□□ -0.84
CTNND1-223ENST00000529986 CC2D1BQ5T0F9 858 aaKnown RBP9.83□□□□□ -0.84
CTNND1-223ENST00000529986 SMARCA2P51531 1590 aa9.82□□□□□ -0.84
CTNND1-223ENST00000529986 KNSTRNQ9Y448 316 aa9.82□□□□□ -0.84
CTNND1-223ENST00000529986 TSPY4P0CV99 314 aa9.82□□□□□ -0.84
CTNND1-223ENST00000529986 TSPY10P0CW01 314 aa9.82□□□□□ -0.84
CTNND1-223ENST00000529986 TOP2AP11388 1531 aaKnown RBP9.82□□□□□ -0.84
CTNND1-223ENST00000529986 CCDC88BA6NC98 1476 aa9.82□□□□□ -0.84
CTNND1-223ENST00000529986 CARD11Q9BXL7 1154 aa9.81□□□□□ -0.84
CTNND1-223ENST00000529986 A0A0G2JS52 829 aa9.81□□□□□ -0.84
CTNND1-223ENST00000529986 DRC7Q8IY82 874 aa9.8□□□□□ -0.84
CTNND1-223ENST00000529986 WIZO95785 1651 aa9.79□□□□□ -0.84
CTNND1-223ENST00000529986 VSIG10Q8N0Z9 540 aa9.79□□□□□ -0.84
CTNND1-223ENST00000529986 CFAP53Q96M91 514 aa9.79□□□□□ -0.84
CTNND1-223ENST00000529986 GOLGA6L6A8MZA4 724 aa9.78□□□□□ -0.84
CTNND1-223ENST00000529986 CHMP7Q8WUX9 453 aaPredicted RBP9.78□□□□□ -0.84
CTNND1-223ENST00000529986 NAP1L2Q9ULW6 460 aaPredicted RBP9.77□□□□□ -0.85
CTNND1-223ENST00000529986 C14orf37Q86TY3 774 aa9.77□□□□□ -0.85
CTNND1-223ENST00000529986 IPO9Q96P70 1041 aaKnown RBP9.77□□□□□ -0.85
CTNND1-223ENST00000529986 ABCC8Q09428 1581 aa9.76□□□□□ -0.85
CTNND1-223ENST00000529986 GOLGA6L4A6NEF3 574 aa9.76□□□□□ -0.85
CTNND1-223ENST00000529986 SOGA1O94964 1423 aa9.76□□□□□ -0.85
CTNND1-223ENST00000529986 HSP90AA2PQ14568 343 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-223ENST00000529986 FGD1P98174 961 aa9.75□□□□□ -0.85
CTNND1-223ENST00000529986 GOLGA6L3A6NEY3 463 aa9.75□□□□□ -0.85
CTNND1-223ENST00000529986 TNNT3P45378 269 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-223ENST00000529986 MAPK8IP3Q9UPT6 1336 aa9.75□□□□□ -0.85
CTNND1-223ENST00000529986 NRDCO43847 1150 aa9.75□□□□□ -0.85
CTNND1-223ENST00000529986 KCNJ4P48050 445 aa9.74□□□□□ -0.85
CTNND1-223ENST00000529986 FHAD1B1AJZ9 1412 aa9.74□□□□□ -0.85
CTNND1-223ENST00000529986 TIMELESSQ9UNS1 1208 aa9.74□□□□□ -0.85
CTNND1-223ENST00000529986 CCER2I3L3R5 266 aa9.73□□□□□ -0.85
CTNND1-223ENST00000529986 KIAA2012Q0VF49 1180 aa9.72□□□□□ -0.85
CTNND1-223ENST00000529986 U2SURPO15042 1029 aaKnown RBP9.72□□□□□ -0.85
CTNND1-223ENST00000529986 APBB1O00213 710 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms