RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 GALR2O43603 387 aaPredicted RBP10.65□□□□□ -0.7
CTR9-205ENST00000529898 POTEIP0CG38 1075 aa10.65□□□□□ -0.7
CTR9-205ENST00000529898 KIF12Q96FN5 646 aa10.64□□□□□ -0.71
CTR9-205ENST00000529898 IFNLR1Q8IU57 520 aaPredicted RBP10.63□□□□□ -0.71
CTR9-205ENST00000529898 FAM212AQ96EL1 285 aa10.6□□□□□ -0.71
CTR9-205ENST00000529898 KLHL34Q8N239 644 aa10.59□□□□□ -0.71
CTR9-205ENST00000529898 MS4A3Q96HJ5 214 aa10.59□□□□□ -0.71
CTR9-205ENST00000529898 SGIP1Q9BQI5 828 aa10.58□□□□□ -0.72
CTR9-205ENST00000529898 DCBLD2Q96PD2 775 aa10.57□□□□□ -0.72
CTR9-205ENST00000529898 MAP3K13O43283 966 aa10.56□□□□□ -0.72
CTR9-205ENST00000529898 SPOCK2Q92563 424 aa10.54□□□□□ -0.72
CTR9-205ENST00000529898 DCAF8Q5TAQ9 597 aa10.53□□□□□ -0.72
CTR9-205ENST00000529898 GSE1Q14687 1217 aa10.52□□□□□ -0.73
CTR9-205ENST00000529898 ASTLQ6HA08 431 aaPredicted RBP10.52□□□□□ -0.73
CTR9-205ENST00000529898 CHRM1P11229 460 aaPredicted RBP10.49□□□□□ -0.73
CTR9-205ENST00000529898 ATMINO43313 823 aaPredicted RBP10.48□□□□□ -0.73
CTR9-205ENST00000529898 PCDHB13Q9Y5F0 798 aa10.47□□□□□ -0.73
CTR9-205ENST00000529898 TIE1P35590 1138 aa10.46□□□□□ -0.73
CTR9-205ENST00000529898 PELP1Q8IZL8 1130 aaKnown RBP10.45□□□□□ -0.74
CTR9-205ENST00000529898 TRPC6Q9Y210 931 aa10.45□□□□□ -0.74
CTR9-205ENST00000529898 IFNL1Q8IU54 200 aa10.44□□□□□ -0.74
CTR9-205ENST00000529898 PYGBP11216 843 aa10.43□□□□□ -0.74
CTR9-205ENST00000529898 BMP2KQ9NSY1 1161 aaPredicted RBP10.43□□□□□ -0.74
CTR9-205ENST00000529898 ATN1P54259 1190 aaPredicted RBP10.4□□□□□ -0.74
CTR9-205ENST00000529898 LHX8Q68G74 356 aa10.39□□□□□ -0.75
CTR9-205ENST00000529898 TTLL13PA6NNM8 815 aa10.38□□□□□ -0.75
CTR9-205ENST00000529898 C7P10643 843 aa10.37□□□□□ -0.75
CTR9-205ENST00000529898 SLC39A7Q92504 469 aa10.37□□□□□ -0.75
CTR9-205ENST00000529898 ZNF467Q7Z7K2 595 aaPredicted RBP10.35□□□□□ -0.75
CTR9-205ENST00000529898 TRIM41Q8WV44 630 aa10.35□□□□□ -0.75
CTR9-205ENST00000529898 CIZ1Q9ULV3 898 aaPredicted RBP10.35□□□□□ -0.75
CTR9-205ENST00000529898 PCDHB8Q9UN66 801 aa10.34□□□□□ -0.75
CTR9-205ENST00000529898 METRNQ9UJH8 293 aa10.32□□□□□ -0.76
CTR9-205ENST00000529898 POTEB2H3BUK9 544 aa10.3□□□□□ -0.76
CTR9-205ENST00000529898 IER5LQ5T953 404 aa10.3□□□□□ -0.76
CTR9-205ENST00000529898 TMEM106CQ9BVX2 250 aa10.3□□□□□ -0.76
CTR9-205ENST00000529898 TRIM35Q9UPQ4 493 aa10.29□□□□□ -0.76
CTR9-205ENST00000529898 POTEFA5A3E0 1075 aa10.28□□□□□ -0.76
CTR9-205ENST00000529898 PSEN1P49768 467 aa10.23□□□□□ -0.77
CTR9-205ENST00000529898 PDAP1Q13442 181 aaKnown RBP10.23□□□□□ -0.77
CTR9-205ENST00000529898 POTEJP0CG39 1038 aa10.21□□□□□ -0.77
CTR9-205ENST00000529898 COLQQ9Y215 455 aaPredicted RBP10.21□□□□□ -0.77
CTR9-205ENST00000529898 IRX5P78411 483 aaPredicted RBP10.19□□□□□ -0.78
CTR9-205ENST00000529898 RNF25Q96BH1 459 aaPredicted RBP10.19□□□□□ -0.78
CTR9-205ENST00000529898 OTUD5Q96G74 571 aa10.19□□□□□ -0.78
CTR9-205ENST00000529898 PKD2Q13563 968 aa10.17□□□□□ -0.78
CTR9-205ENST00000529898 RIOK3O14730 519 aaKnown RBP10.15□□□□□ -0.78
CTR9-205ENST00000529898 SEC24BO95487 1268 aa10.15□□□□□ -0.78
CTR9-205ENST00000529898 MAMSTRQ6ZN01 415 aa10.14□□□□□ -0.79
CTR9-205ENST00000529898 ILDR1Q86SU0 546 aaPredicted RBP10.14□□□□□ -0.79
CTR9-205ENST00000529898 OCEL1Q9H607 264 aa10.14□□□□□ -0.79
CTR9-205ENST00000529898 VGFO15240 615 aaPredicted RBP10.11□□□□□ -0.79
CTR9-205ENST00000529898 PLCG2P16885 1265 aa10.1□□□□□ -0.79
CTR9-205ENST00000529898 ECM2O94769 699 aaPredicted RBP10.09□□□□□ -0.79
CTR9-205ENST00000529898 MKRN3Q13064 507 aaKnown RBP10.09□□□□□ -0.79
CTR9-205ENST00000529898 PDCD7Q8N8D1 485 aaKnown RBP10.09□□□□□ -0.79
CTR9-205ENST00000529898 GOLGA2Q08379 1002 aa10.08□□□□□ -0.8
CTR9-205ENST00000529898 CABP2Q9NPB3 220 aa10.07□□□□□ -0.8
CTR9-205ENST00000529898 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.06□□□□□ -0.8
CTR9-205ENST00000529898 ZFP91Q96JP5 570 aaPredicted RBP10.06□□□□□ -0.8
CTR9-205ENST00000529898 TAOK2Q9UL54 1235 aa10.06□□□□□ -0.8
CTR9-205ENST00000529898 SCUBE2Q9NQ36 999 aa10.05□□□□□ -0.8
CTR9-205ENST00000529898 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.03□□□□□ -0.8
CTR9-205ENST00000529898 RGL2O15211 777 aa10.02□□□□□ -0.81
CTR9-205ENST00000529898 EFCAB3Q8N7B9 438 aa10.01□□□□□ -0.81
CTR9-205ENST00000529898 SOX12O15370 315 aa9.99□□□□□ -0.81
CTR9-205ENST00000529898 L3MBTL3Q96JM7 780 aaPredicted RBP9.98□□□□□ -0.81
CTR9-205ENST00000529898 BCL11BQ9C0K0 894 aaPredicted RBP9.96□□□□□ -0.82
CTR9-205ENST00000529898 DPY19L2Q6NUT2 758 aa9.95□□□□□ -0.82
CTR9-205ENST00000529898 TMEM121BQ9BXQ6 578 aaPredicted RBP9.92□□□□□ -0.82
CTR9-205ENST00000529898 STK25O00506 426 aa9.91□□□□□ -0.82
CTR9-205ENST00000529898 MS4A4AQ96JQ5 239 aa9.91□□□□□ -0.82
CTR9-205ENST00000529898 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.91□□□□□ -0.82
CTR9-205ENST00000529898 STK24Q9Y6E0 443 aa9.91□□□□□ -0.82
CTR9-205ENST00000529898 SLAIN1Q8ND83 568 aa9.9□□□□□ -0.82
CTR9-205ENST00000529898 FBXO22Q8NEZ5 403 aa9.89□□□□□ -0.83
CTR9-205ENST00000529898 PHF8Q9UPP1 1060 aa9.89□□□□□ -0.83
CTR9-205ENST00000529898 BOLA1Q9Y3E2 137 aa9.89□□□□□ -0.83
CTR9-205ENST00000529898 NLRP6P59044 892 aa9.87□□□□□ -0.83
CTR9-205ENST00000529898 MFRPQ9BY79 579 aa9.87□□□□□ -0.83
CTR9-205ENST00000529898 LCE2DQ5TA82 110 aaPredicted RBP9.86□□□□□ -0.83
CTR9-205ENST00000529898 HS6ST3Q8IZP7 471 aa9.86□□□□□ -0.83
CTR9-205ENST00000529898 C3orf67Q6ZVT6 689 aa9.85□□□□□ -0.83
CTR9-205ENST00000529898 DNAJC5Q9H3Z4 198 aa9.85□□□□□ -0.83
CTR9-205ENST00000529898 G3V3G9 751 aa9.81□□□□□ -0.84
CTR9-205ENST00000529898 MICALL2Q8IY33 904 aa9.81□□□□□ -0.84
CTR9-205ENST00000529898 SNPHO15079 494 aa9.78□□□□□ -0.84
CTR9-205ENST00000529898 FAM163AQ96GL9 167 aaPredicted RBP9.78□□□□□ -0.84
CTR9-205ENST00000529898 CHGAP10645 457 aaKnown RBP9.76□□□□□ -0.85
CTR9-205ENST00000529898 ST18O60284 1047 aa9.74□□□□□ -0.85
CTR9-205ENST00000529898 TMEM92Q6UXU6 159 aa9.74□□□□□ -0.85
CTR9-205ENST00000529898 POTEMA6NI47 508 aa9.73□□□□□ -0.85
CTR9-205ENST00000529898 POTEGQ6S5H5 508 aa9.73□□□□□ -0.85
CTR9-205ENST00000529898 NKX1-1Q15270 411 aaPredicted RBP9.72□□□□□ -0.85
CTR9-205ENST00000529898 AMER1Q5JTC6 1135 aaPredicted RBP9.71□□□□□ -0.86
CTR9-205ENST00000529898 PPP1R37O75864 691 aa9.69□□□□□ -0.86
CTR9-205ENST00000529898 HOXB3P14651 431 aaPredicted RBP9.69□□□□□ -0.86
CTR9-205ENST00000529898 KIF3CO14782 793 aa9.67□□□□□ -0.86
CTR9-205ENST00000529898 PCDH10Q9P2E7 1040 aa9.67□□□□□ -0.86
CTR9-205ENST00000529898 RYDENQ9NUL5 291 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms