RNA–Protein interactions for RNA: ENST00000528663.1

CYHR1-208, Transcript of cysteine and histidine rich 1, humanhuman

TSL 1 (best)

Gene CYHR1, Length 5,821 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYHR1-208ENST00000528663 MRS2Q9HD23 443 aa20.12■□□□□ 0.81
CYHR1-208ENST00000528663 CEP164Q9UPV0 1460 aa20.12■□□□□ 0.81
CYHR1-208ENST00000528663 NPM2Q86SE8 214 aaKnown RBP20.11■□□□□ 0.81
CYHR1-208ENST00000528663 SALL2Q9Y467 1007 aaPredicted RBP20.11■□□□□ 0.81
CYHR1-208ENST00000528663 PPP1R15AO75807 674 aaPredicted RBP20.11■□□□□ 0.81
CYHR1-208ENST00000528663 CFDP1Q9UEE9 299 aaPredicted RBP20.11■□□□□ 0.81
CYHR1-208ENST00000528663 TNIKQ9UKE5 1360 aa20.09■□□□□ 0.81
CYHR1-208ENST00000528663 ERCC6Q03468 1493 aa20.08■□□□□ 0.81
CYHR1-208ENST00000528663 HSP90AA1P07900 732 aaKnown RBP20.08■□□□□ 0.8
CYHR1-208ENST00000528663 CCDC136Q96JN2 1154 aa20.02■□□□□ 0.8
CYHR1-208ENST00000528663 CDCA8Q53HL2 280 aa20.01■□□□□ 0.79
CYHR1-208ENST00000528663 SCAF1Q9H7N4 1312 aaKnown RBP20■□□□□ 0.79
CYHR1-208ENST00000528663 ANP32BQ92688 251 aaKnown RBP19.97■□□□□ 0.79
CYHR1-208ENST00000528663 RGL3Q3MIN7 710 aa19.97■□□□□ 0.79
CYHR1-208ENST00000528663 ARID4BQ4LE39 1312 aaPredicted RBP19.95■□□□□ 0.78
CYHR1-208ENST00000528663 C14orf37Q86TY3 774 aa19.93■□□□□ 0.78
CYHR1-208ENST00000528663 MYH16Q9H6N6 1097 aa19.93■□□□□ 0.78
CYHR1-208ENST00000528663 HIRIP3Q9BW71 556 aaPredicted RBP19.93■□□□□ 0.78
CYHR1-208ENST00000528663 FHAD1B1AJZ9 1412 aa19.92■□□□□ 0.78
CYHR1-208ENST00000528663 CFAP53Q96M91 514 aa19.91■□□□□ 0.78
CYHR1-208ENST00000528663 CECR2Q9BXF3 1484 aa19.88■□□□□ 0.77
CYHR1-208ENST00000528663 MYO15BQ96JP2 1530 aa19.88■□□□□ 0.77
CYHR1-208ENST00000528663 CARMIL1Q5VZK9 1371 aa19.87■□□□□ 0.77
CYHR1-208ENST00000528663 CCNB3Q8WWL7 1395 aa19.87■□□□□ 0.77
CYHR1-208ENST00000528663 KNSTRNQ9Y448 316 aa19.87■□□□□ 0.77
CYHR1-208ENST00000528663 MIER1Q8N108 512 aa19.86■□□□□ 0.77
CYHR1-208ENST00000528663 CARD11Q9BXL7 1154 aa19.86■□□□□ 0.77
CYHR1-208ENST00000528663 ZBTB7CA1YPR0 619 aa19.86■□□□□ 0.77
CYHR1-208ENST00000528663 CUX2O14529 1486 aa19.85■□□□□ 0.77
CYHR1-208ENST00000528663 SENP3Q9H4L4 574 aaPredicted RBP19.84■□□□□ 0.77
CYHR1-208ENST00000528663 A0A0G2JS52 829 aa19.82■□□□□ 0.76
CYHR1-208ENST00000528663 EIF4G1Q04637 1599 aaKnown RBP19.78■□□□□ 0.76
CYHR1-208ENST00000528663 HAP1P54257 671 aaPredicted RBP19.77■□□□□ 0.76
CYHR1-208ENST00000528663 POGKQ9P215 609 aa19.76■□□□□ 0.75
CYHR1-208ENST00000528663 KANK1Q14678 1352 aa19.75■□□□□ 0.75
CYHR1-208ENST00000528663 PLEKHG5O94827 1062 aa19.75■□□□□ 0.75
CYHR1-208ENST00000528663 SMARCA2P51531 1590 aa19.75■□□□□ 0.75
CYHR1-208ENST00000528663 PDS5BQ9NTI5 1447 aa19.74■□□□□ 0.75
CYHR1-208ENST00000528663 NUDCQ9Y266 331 aa19.73■□□□□ 0.75
CYHR1-208ENST00000528663 PPM1GO15355 546 aaPredicted RBP19.69■□□□□ 0.74
CYHR1-208ENST00000528663 HDGFP51858 240 aaKnown RBP19.69■□□□□ 0.74
CYHR1-208ENST00000528663 CARMIL2Q6F5E8 1435 aa19.69■□□□□ 0.74
CYHR1-208ENST00000528663 MAPK8IP3Q9UPT6 1336 aa19.69■□□□□ 0.74
CYHR1-208ENST00000528663 SOGA1O94964 1423 aa19.68■□□□□ 0.74
CYHR1-208ENST00000528663 IRX6P78412 446 aaPredicted RBP19.68■□□□□ 0.74
CYHR1-208ENST00000528663 TIMELESSQ9UNS1 1208 aa19.67■□□□□ 0.74
CYHR1-208ENST00000528663 CCDC88BA6NC98 1476 aa19.67■□□□□ 0.74
CYHR1-208ENST00000528663 SIN3AQ96ST3 1273 aa19.66■□□□□ 0.74
CYHR1-208ENST00000528663 MROH2BQ7Z745 1585 aa19.64■□□□□ 0.73
CYHR1-208ENST00000528663 EIF5BO60841 1220 aaKnown RBP19.62■□□□□ 0.73
CYHR1-208ENST00000528663 TMF1P82094 1093 aa19.62■□□□□ 0.73
CYHR1-208ENST00000528663 NBR1Q14596 966 aa19.62■□□□□ 0.73
CYHR1-208ENST00000528663 BECN1Q14457 450 aa19.62■□□□□ 0.73
CYHR1-208ENST00000528663 ARHGAP35Q9NRY4 1499 aa19.6■□□□□ 0.73
CYHR1-208ENST00000528663 FTSJ3Q8IY81 847 aaKnown RBP19.6■□□□□ 0.73
CYHR1-208ENST00000528663 DDRGK1Q96HY6 314 aa19.6■□□□□ 0.73
CYHR1-208ENST00000528663 PNNQ9H307 717 aaKnown RBP19.6■□□□□ 0.73
CYHR1-208ENST00000528663 DCAF11Q8TEB1 546 aa19.6■□□□□ 0.73
CYHR1-208ENST00000528663 VPS8Q8N3P4 1428 aa19.6■□□□□ 0.73
CYHR1-208ENST00000528663 LMOD2Q6P5Q4 547 aa19.58■□□□□ 0.72
CYHR1-208ENST00000528663 CHMP4BQ9H444 224 aaKnown RBP19.57■□□□□ 0.72
CYHR1-208ENST00000528663 TRHP20396 242 aaPredicted RBP19.56■□□□□ 0.72
CYHR1-208ENST00000528663 FMN1Q68DA7 1419 aa19.56■□□□□ 0.72
CYHR1-208ENST00000528663 NEUROD2Q15784 382 aa19.55■□□□□ 0.72
CYHR1-208ENST00000528663 SETD5Q9C0A6 1442 aa19.55■□□□□ 0.72
CYHR1-208ENST00000528663 CASC1Q6TDU7 716 aa19.54■□□□□ 0.72
CYHR1-208ENST00000528663 MS4A1P11836 297 aa19.53■□□□□ 0.72
CYHR1-208ENST00000528663 LAS1LQ9Y4W2 734 aaKnown RBP19.53■□□□□ 0.72
CYHR1-208ENST00000528663 ARXQ96QS3 562 aa19.53■□□□□ 0.72
CYHR1-208ENST00000528663 TDRD9Q8NDG6 1382 aaKnown RBP19.52■□□□□ 0.71
CYHR1-208ENST00000528663 NCLP19338 710 aaKnown RBP19.52■□□□□ 0.71
CYHR1-208ENST00000528663 MLECQ14165 292 aa19.52■□□□□ 0.71
CYHR1-208ENST00000528663 EFCAB2Q5VUJ9 269 aa19.51■□□□□ 0.71
CYHR1-208ENST00000528663 CC2D1BQ5T0F9 858 aaKnown RBP19.51■□□□□ 0.71
CYHR1-208ENST00000528663 TNNT2P45379 298 aaPredicted RBP19.49■□□□□ 0.71
CYHR1-208ENST00000528663 U2SURPO15042 1029 aaKnown RBP19.49■□□□□ 0.71
CYHR1-208ENST00000528663 ABCC8Q09428 1581 aa19.49■□□□□ 0.71
CYHR1-208ENST00000528663 GGT6Q6P531 493 aa19.48■□□□□ 0.71
CYHR1-208ENST00000528663 ANP32EQ9BTT0 268 aa19.48■□□□□ 0.71
CYHR1-208ENST00000528663 GOLGA6L22H0YM25 854 aa19.48■□□□□ 0.71
CYHR1-208ENST00000528663 SUPT16HQ9Y5B9 1047 aaKnown RBP19.48■□□□□ 0.71
CYHR1-208ENST00000528663 TOP2AP11388 1531 aaKnown RBP19.48■□□□□ 0.71
CYHR1-208ENST00000528663 SRPK2P78362 688 aaKnown RBP19.47■□□□□ 0.71
CYHR1-208ENST00000528663 PKD2Q13563 968 aa19.47■□□□□ 0.71
CYHR1-208ENST00000528663 CADPSQ9ULU8 1353 aa19.47■□□□□ 0.71
CYHR1-208ENST00000528663 SENP3-EIF4A1A0A087X0R7 540 aa19.44■□□□□ 0.7
CYHR1-208ENST00000528663 ANKRD30AQ9BXX3 1397 aa19.44■□□□□ 0.7
CYHR1-208ENST00000528663 CDK11BP21127 795 aaKnown RBP19.42■□□□□ 0.7
CYHR1-208ENST00000528663 MORC1Q86VD1 984 aa19.42■□□□□ 0.7
CYHR1-208ENST00000528663 FRAT1Q92837 279 aaPredicted RBP19.42■□□□□ 0.7
CYHR1-208ENST00000528663 KANK4Q5T7N3 995 aaPredicted RBP19.41■□□□□ 0.7
CYHR1-208ENST00000528663 PPP4R2Q9NY27 417 aa19.41■□□□□ 0.7
CYHR1-208ENST00000528663 HDGFL2Q7Z4V5 671 aaPredicted RBP19.38■□□□□ 0.69
CYHR1-208ENST00000528663 RAPGEF2Q9Y4G8 1499 aa19.38■□□□□ 0.69
CYHR1-208ENST00000528663 RSPH4AQ5TD94 716 aa19.38■□□□□ 0.69
CYHR1-208ENST00000528663 NUP155O75694 1391 aa19.38■□□□□ 0.69
CYHR1-208ENST00000528663 CCER2I3L3R5 266 aa19.37■□□□□ 0.69
CYHR1-208ENST00000528663 HSPA5P11021 654 aaKnown RBP19.36■□□□□ 0.69
CYHR1-208ENST00000528663 MPHOSPH9Q99550 1183 aa19.36■□□□□ 0.69
CYHR1-208ENST00000528663 NPHP1O15259 732 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms