RNA–Protein interactions for RNA: ENST00000526009.5

CLNS1A-205, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 747 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-205ENST00000526009 CCDC88BA6NC98 1476 aa14.06□□□□□ -0.16
CLNS1A-205ENST00000526009 ABCC8Q09428 1581 aa14.05□□□□□ -0.16
CLNS1A-205ENST00000526009 FBLN2P98095 1184 aa14.05□□□□□ -0.16
CLNS1A-205ENST00000526009 ABCB7O75027 752 aa14.04□□□□□ -0.16
CLNS1A-205ENST00000526009 EIF4G3O43432 1585 aaKnown RBP14.03□□□□□ -0.16
CLNS1A-205ENST00000526009 AQRO60306 1485 aaKnown RBP eCLIP14.02□□□□□ -0.16
CLNS1A-205ENST00000526009 POLA2Q14181 598 aa14.02□□□□□ -0.17
CLNS1A-205ENST00000526009 ARAP1Q96P48 1450 aa14.01□□□□□ -0.17
CLNS1A-205ENST00000526009 DNMBPQ6XZF7 1577 aa13.98□□□□□ -0.17
CLNS1A-205ENST00000526009 DSG3P32926 999 aa13.98□□□□□ -0.17
CLNS1A-205ENST00000526009 CHD1O14646 1710 aa13.96□□□□□ -0.17
CLNS1A-205ENST00000526009 TARBP1Q13395 1621 aaKnown RBP13.95□□□□□ -0.18
CLNS1A-205ENST00000526009 POLA1P09884 1462 aaPredicted RBP13.92□□□□□ -0.18
CLNS1A-205ENST00000526009 TDRD9Q8NDG6 1382 aaKnown RBP13.9□□□□□ -0.18
CLNS1A-205ENST00000526009 CHMP7Q8WUX9 453 aaPredicted RBP13.89□□□□□ -0.19
CLNS1A-205ENST00000526009 SOGA1O94964 1423 aa13.89□□□□□ -0.19
CLNS1A-205ENST00000526009 RAD54L2Q9Y4B4 1467 aa13.88□□□□□ -0.19
CLNS1A-205ENST00000526009 SNAPC4Q5SXM2 1469 aa13.84□□□□□ -0.19
CLNS1A-205ENST00000526009 CLASP1Q7Z460 1538 aa13.83□□□□□ -0.2
CLNS1A-205ENST00000526009 SYNJ1O43426 1573 aa13.81□□□□□ -0.2
CLNS1A-205ENST00000526009 MAGI1Q96QZ7 1491 aaPredicted RBP13.8□□□□□ -0.2
CLNS1A-205ENST00000526009 FGD5Q6ZNL6 1462 aa13.79□□□□□ -0.2
CLNS1A-205ENST00000526009 WDR97A6NE52 1622 aa13.79□□□□□ -0.2
CLNS1A-205ENST00000526009 GRIN2BQ13224 1484 aa13.78□□□□□ -0.2
CLNS1A-205ENST00000526009 SYNJ2O15056 1496 aa13.77□□□□□ -0.21
CLNS1A-205ENST00000526009 GAPVD1Q14C86 1478 aa13.74□□□□□ -0.21
CLNS1A-205ENST00000526009 ZBTB12Q9Y330 459 aaPredicted RBP13.74□□□□□ -0.21
CLNS1A-205ENST00000526009 CUX1P39880 1505 aa13.7□□□□□ -0.22
CLNS1A-205ENST00000526009 MKRN4PQ13434 485 aaPredicted RBP13.7□□□□□ -0.22
CLNS1A-205ENST00000526009 PBRM1Q86U86 1689 aa13.63□□□□□ -0.23
CLNS1A-205ENST00000526009 ABCA10Q8WWZ4 1543 aa13.61□□□□□ -0.23
CLNS1A-205ENST00000526009 ERCC6L2Q5T890 1561 aa13.59□□□□□ -0.23
CLNS1A-205ENST00000526009 GRIN2AQ12879 1464 aa13.59□□□□□ -0.23
CLNS1A-205ENST00000526009 ABCA5Q8WWZ7 1642 aa13.58□□□□□ -0.24
CLNS1A-205ENST00000526009 FKBP8Q14318 412 aa13.56□□□□□ -0.24
CLNS1A-205ENST00000526009 NUP160Q12769 1436 aa13.56□□□□□ -0.24
CLNS1A-205ENST00000526009 CEP170Q5SW79 1584 aa13.55□□□□□ -0.24
CLNS1A-205ENST00000526009 WRNQ14191 1432 aaPredicted RBP eCLIP13.53□□□□□ -0.24
CLNS1A-205ENST00000526009 FHAD1B1AJZ9 1412 aa13.51□□□□□ -0.25
CLNS1A-205ENST00000526009 ADAMTS12P58397 1594 aa13.5□□□□□ -0.25
CLNS1A-205ENST00000526009 FAM69CQ0P6D2 419 aa13.49□□□□□ -0.25
CLNS1A-205ENST00000526009 JPH4Q96JJ6 628 aa13.49□□□□□ -0.25
CLNS1A-205ENST00000526009 SHROOM2Q13796 1616 aa13.49□□□□□ -0.25
CLNS1A-205ENST00000526009 NPM1P06748 294 aaKnown RBP eCLIP13.48□□□□□ -0.25
CLNS1A-205ENST00000526009 PRG4Q92954 1404 aaPredicted RBP13.47□□□□□ -0.25
CLNS1A-205ENST00000526009 SPDYE4A6NLX3 237 aa13.47□□□□□ -0.25
CLNS1A-205ENST00000526009 KIF13AQ9H1H9 1805 aa13.47□□□□□ -0.25
CLNS1A-205ENST00000526009 ABCC10Q5T3U5 1492 aa13.43□□□□□ -0.26
CLNS1A-205ENST00000526009 ERICH3Q5RHP9 1530 aa13.43□□□□□ -0.26
CLNS1A-205ENST00000526009 KDM4FA0A1W2PPD8 638 aa13.41□□□□□ -0.26
CLNS1A-205ENST00000526009 ZNF692Q9BU19 519 aaPredicted RBP13.4□□□□□ -0.26
CLNS1A-205ENST00000526009 TOP2BQ02880 1626 aa13.39□□□□□ -0.27
CLNS1A-205ENST00000526009 SUPT5HO00267 1087 aaKnown RBP13.39□□□□□ -0.27
CLNS1A-205ENST00000526009 RBM42Q9BTD8 480 aaKnown RBP13.38□□□□□ -0.27
CLNS1A-205ENST00000526009 MAPKBP1O60336 1514 aa13.38□□□□□ -0.27
CLNS1A-205ENST00000526009 SPDYE2BA6NHP3 402 aa13.37□□□□□ -0.27
CLNS1A-205ENST00000526009 SPDYE6P0CI01 402 aa13.37□□□□□ -0.27
CLNS1A-205ENST00000526009 SPDYE2Q495Y8 402 aa13.37□□□□□ -0.27
CLNS1A-205ENST00000526009 BIVM-ERCC5R4GMW8 1640 aa13.37□□□□□ -0.27
CLNS1A-205ENST00000526009 DIP2BQ9P265 1576 aa13.35□□□□□ -0.27
CLNS1A-205ENST00000526009 ILDR1Q86SU0 546 aaPredicted RBP13.34□□□□□ -0.27
CLNS1A-205ENST00000526009 KDM6BO15054 1643 aa13.33□□□□□ -0.28
CLNS1A-205ENST00000526009 RUSC2Q8N2Y8 1516 aa13.32□□□□□ -0.28
CLNS1A-205ENST00000526009 ADCY10Q96PN6 1610 aa13.31□□□□□ -0.28
CLNS1A-205ENST00000526009 KIAA0586Q9BVV6 1533 aa13.28□□□□□ -0.28
CLNS1A-205ENST00000526009 TSPOAP1O95153 1857 aa13.26□□□□□ -0.29
CLNS1A-205ENST00000526009 SSUH2Q9Y2M2 353 aa13.25□□□□□ -0.29
CLNS1A-205ENST00000526009 PTPRGP23470 1445 aa13.24□□□□□ -0.29
CLNS1A-205ENST00000526009 TTBK1Q5TCY1 1321 aaPredicted RBP13.24□□□□□ -0.29
CLNS1A-205ENST00000526009 IGF1RP08069 1367 aa13.23□□□□□ -0.29
CLNS1A-205ENST00000526009 ABCC2Q92887 1545 aa13.18□□□□□ -0.3
CLNS1A-205ENST00000526009 PLB1Q6P1J6 1458 aa13.18□□□□□ -0.3
CLNS1A-205ENST00000526009 CARMIL2Q6F5E8 1435 aa13.18□□□□□ -0.3
CLNS1A-205ENST00000526009 KIF27Q86VH2 1401 aa13.18□□□□□ -0.3
CLNS1A-205ENST00000526009 TNIKQ9UKE5 1360 aa13.18□□□□□ -0.3
CLNS1A-205ENST00000526009 ADGRL1O94910 1474 aa13.17□□□□□ -0.3
CLNS1A-205ENST00000526009 ASXL2Q76L83 1435 aa13.17□□□□□ -0.3
CLNS1A-205ENST00000526009 AKT1S1Q96B36 256 aa13.17□□□□□ -0.3
CLNS1A-205ENST00000526009 GLI2P10070 1586 aa13.15□□□□□ -0.3
CLNS1A-205ENST00000526009 CUL7Q14999 1698 aa13.15□□□□□ -0.31
CLNS1A-205ENST00000526009 PROM2Q8N271 834 aa13.14□□□□□ -0.31
CLNS1A-205ENST00000526009 CARMIL1Q5VZK9 1371 aa13.13□□□□□ -0.31
CLNS1A-205ENST00000526009 COL17A1Q9UMD9 1497 aaPredicted RBP13.12□□□□□ -0.31
CLNS1A-205ENST00000526009 PPRC1Q5VV67 1664 aaKnown RBP13.12□□□□□ -0.31
CLNS1A-205ENST00000526009 UHRF1BP1LA0JNW5 1464 aa13.11□□□□□ -0.31
CLNS1A-205ENST00000526009 UACAQ9BZF9 1416 aa13.11□□□□□ -0.31
CLNS1A-205ENST00000526009 EPRSP07814 1512 aaKnown RBP13.08□□□□□ -0.31
CLNS1A-205ENST00000526009 HECW2Q9P2P5 1572 aa13.08□□□□□ -0.32
CLNS1A-205ENST00000526009 TEX14Q8IWB6 1497 aa13.08□□□□□ -0.32
CLNS1A-205ENST00000526009 REM2Q8IYK8 340 aaPredicted RBP13.07□□□□□ -0.32
CLNS1A-205ENST00000526009 KDM5BQ9UGL1 1544 aa13.06□□□□□ -0.32
CLNS1A-205ENST00000526009 IQGAP2Q13576 1575 aa13.06□□□□□ -0.32
CLNS1A-205ENST00000526009 MAP3K4Q9Y6R4 1608 aa13.05□□□□□ -0.32
CLNS1A-205ENST00000526009 DISP1Q96F81 1524 aa13.04□□□□□ -0.32
CLNS1A-205ENST00000526009 FBXO3Q9UK99 471 aa13.04□□□□□ -0.32
CLNS1A-205ENST00000526009 CLEC11AQ9Y240 323 aa13.01□□□□□ -0.33
CLNS1A-205ENST00000526009 ZCCHC11Q5TAX3 1644 aaKnown RBP12.99□□□□□ -0.33
CLNS1A-205ENST00000526009 SPDYE1Q8NFV5 336 aaPredicted RBP12.99□□□□□ -0.33
CLNS1A-205ENST00000526009 UGGT2Q9NYU1 1516 aa12.98□□□□□ -0.33
CLNS1A-205ENST00000526009 WDR7Q9Y4E6 1490 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms