RNA–Protein interactions for RNA: ENST00000525975.5

HIPK3-204, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-204ENST00000525975 CEP164Q9UPV0 1460 aa6.54□□□□□ -1.36
HIPK3-204ENST00000525975 ERICH6BQ5W0A0 696 aa6.54□□□□□ -1.36
HIPK3-204ENST00000525975 NOP58Q9Y2X3 529 aaKnown RBP6.54□□□□□ -1.36
HIPK3-204ENST00000525975 CCER2I3L3R5 266 aa6.53□□□□□ -1.36
HIPK3-204ENST00000525975 EIF4G1Q04637 1599 aaKnown RBP6.53□□□□□ -1.36
HIPK3-204ENST00000525975 HNRNPUQ00839 825 aaKnown RBP eCLIP6.53□□□□□ -1.36
HIPK3-204ENST00000525975 PABPN1Q86U42 306 aaKnown RBP eCLIP6.53□□□□□ -1.36
HIPK3-204ENST00000525975 SALL2Q9Y467 1007 aaPredicted RBP6.52□□□□□ -1.37
HIPK3-204ENST00000525975 PPP4R3CPQ6ZMV5 832 aa6.52□□□□□ -1.37
HIPK3-204ENST00000525975 CCDC136Q96JN2 1154 aa6.51□□□□□ -1.37
HIPK3-204ENST00000525975 HIRIP3Q9BW71 556 aaPredicted RBP6.51□□□□□ -1.37
HIPK3-204ENST00000525975 NPM3O75607 178 aaKnown RBP6.51□□□□□ -1.37
HIPK3-204ENST00000525975 PPP4R2Q9NY27 417 aa6.5□□□□□ -1.37
HIPK3-204ENST00000525975 ANP32AP39687 249 aaKnown RBP6.5□□□□□ -1.37
HIPK3-204ENST00000525975 DNAJC5BQ9UF47 199 aa6.5□□□□□ -1.37
HIPK3-204ENST00000525975 DAXXQ9UER7 740 aaPredicted RBP6.49□□□□□ -1.37
HIPK3-204ENST00000525975 TOP2AP11388 1531 aaKnown RBP6.49□□□□□ -1.37
HIPK3-204ENST00000525975 PPP1R15AO75807 674 aaPredicted RBP6.48□□□□□ -1.37
HIPK3-204ENST00000525975 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.48□□□□□ -1.37
HIPK3-204ENST00000525975 B4GALNT3Q6L9W6 998 aa6.47□□□□□ -1.37
HIPK3-204ENST00000525975 PEG3Q9GZU2 1588 aa6.47□□□□□ -1.37
HIPK3-204ENST00000525975 ZBTB47Q9UFB7 747 aaPredicted RBP6.47□□□□□ -1.37
HIPK3-204ENST00000525975 KANK4Q5T7N3 995 aaPredicted RBP6.46□□□□□ -1.37
HIPK3-204ENST00000525975 CCNB3Q8WWL7 1395 aa6.46□□□□□ -1.38
HIPK3-204ENST00000525975 KIF21BO75037 1637 aa6.46□□□□□ -1.38
HIPK3-204ENST00000525975 PAK3O75914 559 aaPredicted RBP6.46□□□□□ -1.38
HIPK3-204ENST00000525975 IL27Q8NEV9 243 aa6.46□□□□□ -1.38
HIPK3-204ENST00000525975 SIN3AQ96ST3 1273 aa6.46□□□□□ -1.38
HIPK3-204ENST00000525975 RAB3GAP2Q9H2M9 1393 aa6.45□□□□□ -1.38
HIPK3-204ENST00000525975 SMARCA2P51531 1590 aa6.45□□□□□ -1.38
HIPK3-204ENST00000525975 BAZ1BQ9UIG0 1483 aaKnown RBP6.45□□□□□ -1.38
HIPK3-204ENST00000525975 EIF5BO60841 1220 aaKnown RBP6.45□□□□□ -1.38
HIPK3-204ENST00000525975 RAPGEF2Q9Y4G8 1499 aa6.44□□□□□ -1.38
HIPK3-204ENST00000525975 WDR97A6NE52 1622 aa6.43□□□□□ -1.38
HIPK3-204ENST00000525975 RRBP1Q9P2E9 1410 aaKnown RBP6.43□□□□□ -1.38
HIPK3-204ENST00000525975 IPO9Q96P70 1041 aaKnown RBP6.43□□□□□ -1.38
HIPK3-204ENST00000525975 FAM50AQ14320 339 aaKnown RBP6.42□□□□□ -1.38
HIPK3-204ENST00000525975 UBE2Q2Q8WVN8 375 aa6.42□□□□□ -1.38
HIPK3-204ENST00000525975 TIMELESSQ9UNS1 1208 aa6.41□□□□□ -1.38
HIPK3-204ENST00000525975 TONSLQ96HA7 1378 aa6.41□□□□□ -1.38
HIPK3-204ENST00000525975 CUX2O14529 1486 aa6.41□□□□□ -1.38
HIPK3-204ENST00000525975 NPM2Q86SE8 214 aaKnown RBP6.4□□□□□ -1.38
HIPK3-204ENST00000525975 ATAD2BQ9ULI0 1458 aa6.4□□□□□ -1.38
HIPK3-204ENST00000525975 SETD5Q9C0A6 1442 aa6.4□□□□□ -1.38
HIPK3-204ENST00000525975 MAPKBP1O60336 1514 aa6.4□□□□□ -1.39
HIPK3-204ENST00000525975 FAM9BQ8IZU0 186 aa6.4□□□□□ -1.39
HIPK3-204ENST00000525975 TAOK2Q9UL54 1235 aa6.4□□□□□ -1.39
HIPK3-204ENST00000525975 NEFMP07197 916 aa6.39□□□□□ -1.39
HIPK3-204ENST00000525975 PLCB2Q00722 1185 aa6.39□□□□□ -1.39
HIPK3-204ENST00000525975 LAS1LQ9Y4W2 734 aaKnown RBP6.39□□□□□ -1.39
HIPK3-204ENST00000525975 MRS2Q9HD23 443 aa6.37□□□□□ -1.39
HIPK3-204ENST00000525975 ARAP1Q96P48 1450 aa6.37□□□□□ -1.39
HIPK3-204ENST00000525975 SYNJ1O43426 1573 aa6.36□□□□□ -1.39
HIPK3-204ENST00000525975 FOXD4L1Q9NU39 408 aa6.35□□□□□ -1.39
HIPK3-204ENST00000525975 USP35Q9P2H5 1018 aa6.35□□□□□ -1.39
HIPK3-204ENST00000525975 PPM1GO15355 546 aaPredicted RBP6.35□□□□□ -1.39
HIPK3-204ENST00000525975 ATP1B4Q9UN42 357 aaPredicted RBP6.35□□□□□ -1.39
HIPK3-204ENST00000525975 ZBED9Q6R2W3 1325 aa6.34□□□□□ -1.39
HIPK3-204ENST00000525975 HMGXB3Q12766 1538 aa6.33□□□□□ -1.4
HIPK3-204ENST00000525975 BRPF3Q9ULD4 1205 aa6.33□□□□□ -1.4
HIPK3-204ENST00000525975 WASHC2AQ641Q2 1341 aa6.33□□□□□ -1.4
HIPK3-204ENST00000525975 ARXQ96QS3 562 aa6.32□□□□□ -1.4
HIPK3-204ENST00000525975 CNGB1Q14028 1251 aaPredicted RBP6.32□□□□□ -1.4
HIPK3-204ENST00000525975 NCAPD3P42695 1498 aa6.32□□□□□ -1.4
HIPK3-204ENST00000525975 C11orf95C9JLR9 678 aaPredicted RBP6.31□□□□□ -1.4
HIPK3-204ENST00000525975 GLIPR1L2Q4G1C9 344 aa6.31□□□□□ -1.4
HIPK3-204ENST00000525975 CCDC184Q52MB2 194 aa6.31□□□□□ -1.4
HIPK3-204ENST00000525975 EIF4G2P78344 907 aaKnown RBP eCLIP6.3□□□□□ -1.4
HIPK3-204ENST00000525975 ERICH3Q5RHP9 1530 aa6.3□□□□□ -1.4
HIPK3-204ENST00000525975 HSPA5P11021 654 aaKnown RBP6.3□□□□□ -1.4
HIPK3-204ENST00000525975 PKNOX2Q96KN3 472 aa6.3□□□□□ -1.4
HIPK3-204ENST00000525975 GSE1Q14687 1217 aa6.3□□□□□ -1.4
HIPK3-204ENST00000525975 RSPH6AQ9H0K4 717 aa6.29□□□□□ -1.4
HIPK3-204ENST00000525975 PRKRIP1Q9H875 184 aaPredicted RBP6.29□□□□□ -1.4
HIPK3-204ENST00000525975 AKNAQ7Z591 1439 aa6.29□□□□□ -1.4
HIPK3-204ENST00000525975 DDRGK1Q96HY6 314 aa6.29□□□□□ -1.4
HIPK3-204ENST00000525975 NUDCQ9Y266 331 aa6.29□□□□□ -1.4
HIPK3-204ENST00000525975 WASHC2CQ9Y4E1 1318 aa6.29□□□□□ -1.4
HIPK3-204ENST00000525975 FHAD1B1AJZ9 1412 aa6.29□□□□□ -1.4
HIPK3-204ENST00000525975 CC2D2AQ9P2K1 1620 aa6.29□□□□□ -1.4
HIPK3-204ENST00000525975 PRXQ9BXM0 1461 aa6.28□□□□□ -1.4
HIPK3-204ENST00000525975 PHLDB1Q86UU1 1377 aa6.28□□□□□ -1.4
HIPK3-204ENST00000525975 TCERG1O14776 1098 aaKnown RBP6.28□□□□□ -1.4
HIPK3-204ENST00000525975 CNTLNQ9NXG0 1405 aa6.28□□□□□ -1.4
HIPK3-204ENST00000525975 SENP3-EIF4A1A0A087X0R7 540 aa6.27□□□□□ -1.41
HIPK3-204ENST00000525975 PDE4AP27815 886 aa6.27□□□□□ -1.41
HIPK3-204ENST00000525975 POLR3GLQ9BT43 218 aa6.27□□□□□ -1.41
HIPK3-204ENST00000525975 ARHGAP35Q9NRY4 1499 aa6.27□□□□□ -1.41
HIPK3-204ENST00000525975 SMG6Q86US8 1419 aaKnown RBP6.26□□□□□ -1.41
HIPK3-204ENST00000525975 TIAM1Q13009 1591 aa6.25□□□□□ -1.41
HIPK3-204ENST00000525975 PRDM2Q13029 1718 aa6.25□□□□□ -1.41
HIPK3-204ENST00000525975 KIF27Q86VH2 1401 aa6.25□□□□□ -1.41
HIPK3-204ENST00000525975 FRAT1Q92837 279 aaPredicted RBP6.25□□□□□ -1.41
HIPK3-204ENST00000525975 LRRC9Q6ZRR7 1453 aa6.25□□□□□ -1.41
HIPK3-204ENST00000525975 NFKBIBQ15653 356 aa6.25□□□□□ -1.41
HIPK3-204ENST00000525975 P3H3Q8IVL6 736 aa6.24□□□□□ -1.41
HIPK3-204ENST00000525975 CCDC18Q5T9S5 1454 aa6.24□□□□□ -1.41
HIPK3-204ENST00000525975 VSIG10Q8N0Z9 540 aa6.23□□□□□ -1.41
HIPK3-204ENST00000525975 FAM43AQ8N2R8 423 aa6.23□□□□□ -1.41
HIPK3-204ENST00000525975 BACH2Q9BYV9 841 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms