RNA–Protein interactions for RNA: ENST00000525929.1

PCDHA7-202, Transcript of protocadherin alpha 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA7, Length 5,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7-202ENST00000525929 GOLGA3Q08378 1498 aa22.98■■□□□ 1.27
PCDHA7-202ENST00000525929 PPP1R15AO75807 674 aaPredicted RBP22.96■■□□□ 1.27
PCDHA7-202ENST00000525929 MYH16Q9H6N6 1097 aa22.96■■□□□ 1.27
PCDHA7-202ENST00000525929 SCAF1Q9H7N4 1312 aaKnown RBP22.96■■□□□ 1.27
PCDHA7-202ENST00000525929 CEP162Q5TB80 1403 aa22.94■■□□□ 1.26
PCDHA7-202ENST00000525929 RB1CC1Q8TDY2 1594 aa22.93■■□□□ 1.26
PCDHA7-202ENST00000525929 RGL3Q3MIN7 710 aa22.93■■□□□ 1.26
PCDHA7-202ENST00000525929 IRX6P78412 446 aaPredicted RBP22.91■■□□□ 1.26
PCDHA7-202ENST00000525929 CFDP1Q9UEE9 299 aaPredicted RBP22.9■■□□□ 1.26
PCDHA7-202ENST00000525929 WRNQ14191 1432 aaPredicted RBP eCLIP22.9■■□□□ 1.26
PCDHA7-202ENST00000525929 EIF5BO60841 1220 aaKnown RBP22.9■■□□□ 1.26
PCDHA7-202ENST00000525929 SENP3Q9H4L4 574 aaPredicted RBP22.87■■□□□ 1.25
PCDHA7-202ENST00000525929 CDCA8Q53HL2 280 aa22.86■■□□□ 1.25
PCDHA7-202ENST00000525929 C14orf37Q86TY3 774 aa22.85■■□□□ 1.25
PCDHA7-202ENST00000525929 NBR1Q14596 966 aa22.85■■□□□ 1.25
PCDHA7-202ENST00000525929 KIF27Q86VH2 1401 aa22.85■■□□□ 1.25
PCDHA7-202ENST00000525929 CFAP53Q96M91 514 aa22.83■■□□□ 1.24
PCDHA7-202ENST00000525929 A0A0G2JS52 829 aa22.82■■□□□ 1.24
PCDHA7-202ENST00000525929 ZBTB7CA1YPR0 619 aa22.82■■□□□ 1.24
PCDHA7-202ENST00000525929 KNSTRNQ9Y448 316 aa22.8■■□□□ 1.24
PCDHA7-202ENST00000525929 BAZ1BQ9UIG0 1483 aaKnown RBP22.8■■□□□ 1.24
PCDHA7-202ENST00000525929 PLEKHG5O94827 1062 aa22.78■■□□□ 1.24
PCDHA7-202ENST00000525929 TNIKQ9UKE5 1360 aa22.78■■□□□ 1.24
PCDHA7-202ENST00000525929 CARD11Q9BXL7 1154 aa22.77■■□□□ 1.24
PCDHA7-202ENST00000525929 ARXQ96QS3 562 aa22.76■■□□□ 1.23
PCDHA7-202ENST00000525929 CEP164Q9UPV0 1460 aa22.74■■□□□ 1.23
PCDHA7-202ENST00000525929 ARID4BQ4LE39 1312 aaPredicted RBP22.72■■□□□ 1.23
PCDHA7-202ENST00000525929 BECN1Q14457 450 aa22.71■■□□□ 1.23
PCDHA7-202ENST00000525929 MYO15BQ96JP2 1530 aa22.68■■□□□ 1.22
PCDHA7-202ENST00000525929 DDRGK1Q96HY6 314 aa22.68■■□□□ 1.22
PCDHA7-202ENST00000525929 PPM1GO15355 546 aaPredicted RBP22.68■■□□□ 1.22
PCDHA7-202ENST00000525929 NACADO15069 1562 aa22.67■■□□□ 1.22
PCDHA7-202ENST00000525929 SENP3-EIF4A1A0A087X0R7 540 aa22.63■■□□□ 1.21
PCDHA7-202ENST00000525929 HAP1P54257 671 aaPredicted RBP22.63■■□□□ 1.21
PCDHA7-202ENST00000525929 NUDCQ9Y266 331 aa22.61■■□□□ 1.21
PCDHA7-202ENST00000525929 SIN3AQ96ST3 1273 aa22.61■■□□□ 1.21
PCDHA7-202ENST00000525929 NCLP19338 710 aaKnown RBP22.61■■□□□ 1.21
PCDHA7-202ENST00000525929 FTSJ3Q8IY81 847 aaKnown RBP22.6■■□□□ 1.21
PCDHA7-202ENST00000525929 MAPK8IP3Q9UPT6 1336 aa22.6■■□□□ 1.21
PCDHA7-202ENST00000525929 POGKQ9P215 609 aa22.6■■□□□ 1.21
PCDHA7-202ENST00000525929 SUPT16HQ9Y5B9 1047 aaKnown RBP22.59■■□□□ 1.21
PCDHA7-202ENST00000525929 NEUROD2Q15784 382 aa22.59■■□□□ 1.21
PCDHA7-202ENST00000525929 GOLGA6L22H0YM25 854 aa22.58■■□□□ 1.21
PCDHA7-202ENST00000525929 ANP32EQ9BTT0 268 aa22.58■■□□□ 1.21
PCDHA7-202ENST00000525929 CCNB3Q8WWL7 1395 aa22.55■■□□□ 1.2
PCDHA7-202ENST00000525929 GLIPR1L2Q4G1C9 344 aa22.55■■□□□ 1.2
PCDHA7-202ENST00000525929 CDK11BP21127 795 aaKnown RBP22.53■■□□□ 1.2
PCDHA7-202ENST00000525929 FHAD1B1AJZ9 1412 aa22.53■■□□□ 1.2
PCDHA7-202ENST00000525929 CASC1Q6TDU7 716 aa22.52■■□□□ 1.2
PCDHA7-202ENST00000525929 ERCC6Q03468 1493 aa22.52■■□□□ 1.2
PCDHA7-202ENST00000525929 LAS1LQ9Y4W2 734 aaKnown RBP22.52■■□□□ 1.2
PCDHA7-202ENST00000525929 BAZ1AQ9NRL2 1556 aaPredicted RBP22.48■■□□□ 1.19
PCDHA7-202ENST00000525929 LMOD2Q6P5Q4 547 aa22.47■■□□□ 1.19
PCDHA7-202ENST00000525929 CARMIL1Q5VZK9 1371 aa22.47■■□□□ 1.19
PCDHA7-202ENST00000525929 TNNT2P45379 298 aaPredicted RBP22.47■■□□□ 1.19
PCDHA7-202ENST00000525929 TRIM44Q96DX7 344 aaPredicted RBP22.47■■□□□ 1.19
PCDHA7-202ENST00000525929 CC2D1BQ5T0F9 858 aaKnown RBP22.45■■□□□ 1.18
PCDHA7-202ENST00000525929 DCAF11Q8TEB1 546 aa22.45■■□□□ 1.18
PCDHA7-202ENST00000525929 TMF1P82094 1093 aa22.45■■□□□ 1.18
PCDHA7-202ENST00000525929 CHMP4BQ9H444 224 aaKnown RBP22.45■■□□□ 1.18
PCDHA7-202ENST00000525929 PPP4R2Q9NY27 417 aa22.45■■□□□ 1.18
PCDHA7-202ENST00000525929 FRAT1Q92837 279 aaPredicted RBP22.44■■□□□ 1.18
PCDHA7-202ENST00000525929 TIMELESSQ9UNS1 1208 aa22.44■■□□□ 1.18
PCDHA7-202ENST00000525929 U2SURPO15042 1029 aaKnown RBP22.42■■□□□ 1.18
PCDHA7-202ENST00000525929 MS4A1P11836 297 aa22.42■■□□□ 1.18
PCDHA7-202ENST00000525929 PNNQ9H307 717 aaKnown RBP22.41■■□□□ 1.18
PCDHA7-202ENST00000525929 KANK1Q14678 1352 aa22.4■■□□□ 1.18
PCDHA7-202ENST00000525929 ZRSR1Q15695 479 aaKnown RBP22.4■■□□□ 1.18
PCDHA7-202ENST00000525929 CUX2O14529 1486 aa22.4■■□□□ 1.18
PCDHA7-202ENST00000525929 RGS3P49796 1198 aa22.39■■□□□ 1.18
PCDHA7-202ENST00000525929 HDGFP51858 240 aaKnown RBP22.36■■□□□ 1.17
PCDHA7-202ENST00000525929 CECR2Q9BXF3 1484 aa22.34■■□□□ 1.17
PCDHA7-202ENST00000525929 EIF4G1Q04637 1599 aaKnown RBP22.33■■□□□ 1.17
PCDHA7-202ENST00000525929 SOGA1O94964 1423 aa22.32■■□□□ 1.16
PCDHA7-202ENST00000525929 PTMAP06454 111 aaKnown RBP22.31■■□□□ 1.16
PCDHA7-202ENST00000525929 SRPK2P78362 688 aaKnown RBP22.3■■□□□ 1.16
PCDHA7-202ENST00000525929 OS9Q13438 667 aaPredicted RBP22.29■■□□□ 1.16
PCDHA7-202ENST00000525929 MORC1Q86VD1 984 aa22.27■■□□□ 1.16
PCDHA7-202ENST00000525929 MLECQ14165 292 aa22.27■■□□□ 1.16
PCDHA7-202ENST00000525929 SETD5Q9C0A6 1442 aa22.27■■□□□ 1.16
PCDHA7-202ENST00000525929 PKD2Q13563 968 aa22.25■■□□□ 1.15
PCDHA7-202ENST00000525929 TPRNQ4KMQ1 711 aa22.24■■□□□ 1.15
PCDHA7-202ENST00000525929 CCER2I3L3R5 266 aa22.24■■□□□ 1.15
PCDHA7-202ENST00000525929 B4GALNT3Q6L9W6 998 aa22.24■■□□□ 1.15
PCDHA7-202ENST00000525929 NPHP1O15259 732 aa22.23■■□□□ 1.15
PCDHA7-202ENST00000525929 GGT6Q6P531 493 aa22.23■■□□□ 1.15
PCDHA7-202ENST00000525929 VPS8Q8N3P4 1428 aa22.22■■□□□ 1.15
PCDHA7-202ENST00000525929 FGD1P98174 961 aa22.22■■□□□ 1.15
PCDHA7-202ENST00000525929 HSPA5P11021 654 aaKnown RBP22.22■■□□□ 1.15
PCDHA7-202ENST00000525929 ARHGAP35Q9NRY4 1499 aa22.22■■□□□ 1.15
PCDHA7-202ENST00000525929 SAFB2Q14151 953 aaKnown RBP eCLIP22.21■■□□□ 1.15
PCDHA7-202ENST00000525929 KCNJ4P48050 445 aa22.21■■□□□ 1.15
PCDHA7-202ENST00000525929 SOX12O15370 315 aa22.2■■□□□ 1.14
PCDHA7-202ENST00000525929 HSP90AB1P08238 724 aaKnown RBP22.2■■□□□ 1.14
PCDHA7-202ENST00000525929 CARMIL2Q6F5E8 1435 aa22.18■■□□□ 1.14
PCDHA7-202ENST00000525929 TRHP20396 242 aaPredicted RBP22.17■■□□□ 1.14
PCDHA7-202ENST00000525929 DNTTIP2Q5QJE6 756 aaKnown RBP22.17■■□□□ 1.14
PCDHA7-202ENST00000525929 NOP58Q9Y2X3 529 aaKnown RBP22.16■■□□□ 1.14
PCDHA7-202ENST00000525929 KANK4Q5T7N3 995 aaPredicted RBP22.16■■□□□ 1.14
PCDHA7-202ENST00000525929 ERICH6BQ5W0A0 696 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms