RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 TDRD9Q8NDG6 1382 aaKnown RBP15.98■□□□□ 0.15
CLNS1A-204ENST00000525428 PRDM2Q13029 1718 aa15.97■□□□□ 0.15
CLNS1A-204ENST00000525428 POLA1P09884 1462 aaPredicted RBP15.96■□□□□ 0.15
CLNS1A-204ENST00000525428 CCDC136Q96JN2 1154 aa15.95■□□□□ 0.14
CLNS1A-204ENST00000525428 SALL2Q9Y467 1007 aaPredicted RBP15.94■□□□□ 0.14
CLNS1A-204ENST00000525428 KIF27Q86VH2 1401 aa15.93■□□□□ 0.14
CLNS1A-204ENST00000525428 IRX6P78412 446 aaPredicted RBP15.93■□□□□ 0.14
CLNS1A-204ENST00000525428 NBR1Q14596 966 aa15.93■□□□□ 0.14
CLNS1A-204ENST00000525428 TNIKQ9UKE5 1360 aa15.92■□□□□ 0.14
CLNS1A-204ENST00000525428 DNMBPQ6XZF7 1577 aa15.92■□□□□ 0.14
CLNS1A-204ENST00000525428 RAPGEF2Q9Y4G8 1499 aa15.92■□□□□ 0.14
CLNS1A-204ENST00000525428 EEA1Q15075 1411 aa15.91■□□□□ 0.14
CLNS1A-204ENST00000525428 APLP2Q06481 763 aa15.9■□□□□ 0.14
CLNS1A-204ENST00000525428 DDX10Q13206 875 aaKnown RBP15.9■□□□□ 0.14
CLNS1A-204ENST00000525428 FANCIQ9NVI1 1328 aa15.89■□□□□ 0.13
CLNS1A-204ENST00000525428 IGF1RP08069 1367 aa15.89■□□□□ 0.13
CLNS1A-204ENST00000525428 CDK11AQ9UQ88 783 aaPredicted RBP15.89■□□□□ 0.13
CLNS1A-204ENST00000525428 MRC2Q9UBG0 1479 aa15.86■□□□□ 0.13
CLNS1A-204ENST00000525428 DHX57Q6P158 1386 aaKnown RBP15.84■□□□□ 0.13
CLNS1A-204ENST00000525428 RTN4Q9NQC3 1192 aaKnown RBP15.84■□□□□ 0.13
CLNS1A-204ENST00000525428 AQRO60306 1485 aaKnown RBP eCLIP15.83■□□□□ 0.137e-8■■■■□ 26.4
CLNS1A-204ENST00000525428 GOLGA3Q08378 1498 aa15.83■□□□□ 0.12
CLNS1A-204ENST00000525428 CARMIL1Q5VZK9 1371 aa15.81■□□□□ 0.12
CLNS1A-204ENST00000525428 MYT1LQ9UL68 1186 aa15.81■□□□□ 0.12
CLNS1A-204ENST00000525428 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.8■□□□□ 0.12
CLNS1A-204ENST00000525428 HIRIP3Q9BW71 556 aaPredicted RBP15.79■□□□□ 0.12
CLNS1A-204ENST00000525428 ZNF608Q9ULD9 1512 aaPredicted RBP15.79■□□□□ 0.12
CLNS1A-204ENST00000525428 ABCA10Q8WWZ4 1543 aa15.78■□□□□ 0.12
CLNS1A-204ENST00000525428 PRXQ9BXM0 1461 aa15.77■□□□□ 0.12
CLNS1A-204ENST00000525428 P3H3Q8IVL6 736 aa15.76■□□□□ 0.11
CLNS1A-204ENST00000525428 FBLN2P98095 1184 aa15.74■□□□□ 0.11
CLNS1A-204ENST00000525428 IL27Q8NEV9 243 aa15.74■□□□□ 0.11
CLNS1A-204ENST00000525428 GAPVD1Q14C86 1478 aa15.74■□□□□ 0.11
CLNS1A-204ENST00000525428 PAK3O75914 559 aaPredicted RBP15.71■□□□□ 0.11
CLNS1A-204ENST00000525428 KIF21BO75037 1637 aa15.7■□□□□ 0.1
CLNS1A-204ENST00000525428 WDR62O43379 1518 aa15.69■□□□□ 0.1
CLNS1A-204ENST00000525428 CLIP1P30622 1438 aa15.69■□□□□ 0.1
CLNS1A-204ENST00000525428 TARBP1Q13395 1621 aaKnown RBP15.68■□□□□ 0.1
CLNS1A-204ENST00000525428 NOP58Q9Y2X3 529 aaKnown RBP15.68■□□□□ 0.1
CLNS1A-204ENST00000525428 THOC2Q8NI27 1593 aaKnown RBP15.67■□□□□ 0.1
CLNS1A-204ENST00000525428 ANP32CO43423 234 aa15.67■□□□□ 0.1
CLNS1A-204ENST00000525428 HNRNPUQ00839 825 aaKnown RBP eCLIP15.64■□□□□ 0.09
CLNS1A-204ENST00000525428 RTL5Q5HYW3 569 aaPredicted RBP15.63■□□□□ 0.09
CLNS1A-204ENST00000525428 IFT140Q96RY7 1462 aa15.63■□□□□ 0.09
CLNS1A-204ENST00000525428 ERICH6BQ5W0A0 696 aa15.63■□□□□ 0.09
CLNS1A-204ENST00000525428 B4GALNT3Q6L9W6 998 aa15.63■□□□□ 0.09
CLNS1A-204ENST00000525428 ATP1B4Q9UN42 357 aaPredicted RBP15.61■□□□□ 0.09
CLNS1A-204ENST00000525428 PPP1R15AO75807 674 aaPredicted RBP15.6■□□□□ 0.09
CLNS1A-204ENST00000525428 VPS8Q8N3P4 1428 aa15.6■□□□□ 0.09
CLNS1A-204ENST00000525428 ERICH3Q5RHP9 1530 aa15.59■□□□□ 0.09
CLNS1A-204ENST00000525428 ABCA5Q8WWZ7 1642 aa15.59■□□□□ 0.09
CLNS1A-204ENST00000525428 WDR97A6NE52 1622 aa15.59■□□□□ 0.09
CLNS1A-204ENST00000525428 CHMP7Q8WUX9 453 aaPredicted RBP15.59■□□□□ 0.09
CLNS1A-204ENST00000525428 SIN3AQ96ST3 1273 aa15.57■□□□□ 0.08
CLNS1A-204ENST00000525428 KANK4Q5T7N3 995 aaPredicted RBP15.57■□□□□ 0.08
CLNS1A-204ENST00000525428 CCER2I3L3R5 266 aa15.56■□□□□ 0.08
CLNS1A-204ENST00000525428 EIF5BO60841 1220 aaKnown RBP15.56■□□□□ 0.08
CLNS1A-204ENST00000525428 GRIN2BQ13224 1484 aa15.56■□□□□ 0.08
CLNS1A-204ENST00000525428 UBE2Q2Q8WVN8 375 aa15.56■□□□□ 0.08
CLNS1A-204ENST00000525428 SNAPC4Q5SXM2 1469 aa15.55■□□□□ 0.08
CLNS1A-204ENST00000525428 PPP4R2Q9NY27 417 aa15.54■□□□□ 0.08
CLNS1A-204ENST00000525428 ARAP1Q96P48 1450 aa15.53■□□□□ 0.08
CLNS1A-204ENST00000525428 EIF4G3O43432 1585 aaKnown RBP15.52■□□□□ 0.07
CLNS1A-204ENST00000525428 ARID3CA6NKF2 412 aa15.51■□□□□ 0.07
CLNS1A-204ENST00000525428 ARHGAP35Q9NRY4 1499 aa15.51■□□□□ 0.07
CLNS1A-204ENST00000525428 FHAD1B1AJZ9 1412 aa15.5■□□□□ 0.07
CLNS1A-204ENST00000525428 FHOD3Q2V2M9 1422 aa15.48■□□□□ 0.07
CLNS1A-204ENST00000525428 ZBTB47Q9UFB7 747 aaPredicted RBP15.48■□□□□ 0.07
CLNS1A-204ENST00000525428 PBRM1Q86U86 1689 aa15.46■□□□□ 0.07
CLNS1A-204ENST00000525428 ANP32AP39687 249 aaKnown RBP15.46■□□□□ 0.07
CLNS1A-204ENST00000525428 CUL7Q14999 1698 aa15.46■□□□□ 0.06
CLNS1A-204ENST00000525428 IPO9Q96P70 1041 aaKnown RBP15.43■□□□□ 0.06
CLNS1A-204ENST00000525428 ADAMTS12P58397 1594 aa15.42■□□□□ 0.06
CLNS1A-204ENST00000525428 LAS1LQ9Y4W2 734 aaKnown RBP15.42■□□□□ 0.06
CLNS1A-204ENST00000525428 RAB3GAP2Q9H2M9 1393 aa15.42■□□□□ 0.06
CLNS1A-204ENST00000525428 NPM2Q86SE8 214 aaKnown RBP15.41■□□□□ 0.06
CLNS1A-204ENST00000525428 GRIN2AQ12879 1464 aa15.39■□□□□ 0.05
CLNS1A-204ENST00000525428 NEFMP07197 916 aa15.37■□□□□ 0.05
CLNS1A-204ENST00000525428 BRPF3Q9ULD4 1205 aa15.36■□□□□ 0.05
CLNS1A-204ENST00000525428 SYNJ2O15056 1496 aa15.36■□□□□ 0.05
CLNS1A-204ENST00000525428 FAM9BQ8IZU0 186 aa15.36■□□□□ 0.05
CLNS1A-204ENST00000525428 JPH4Q96JJ6 628 aa15.36■□□□□ 0.05
CLNS1A-204ENST00000525428 CCNB3Q8WWL7 1395 aa15.36■□□□□ 0.05
CLNS1A-204ENST00000525428 MAGI1Q96QZ7 1491 aaPredicted RBP15.35■□□□□ 0.05
CLNS1A-204ENST00000525428 MAPKBP1O60336 1514 aa15.35■□□□□ 0.05
CLNS1A-204ENST00000525428 CCDC184Q52MB2 194 aa15.33■□□□□ 0.04
CLNS1A-204ENST00000525428 SENP3-EIF4A1A0A087X0R7 540 aa15.3■□□□□ 0.04
CLNS1A-204ENST00000525428 TIMELESSQ9UNS1 1208 aa15.3■□□□□ 0.04
CLNS1A-204ENST00000525428 CTTNBP2Q8WZ74 1663 aa15.3■□□□□ 0.04
CLNS1A-204ENST00000525428 CEP170Q5SW79 1584 aa15.29■□□□□ 0.04
CLNS1A-204ENST00000525428 RRBP1Q9P2E9 1410 aaKnown RBP15.29■□□□□ 0.04
CLNS1A-204ENST00000525428 KIAA0586Q9BVV6 1533 aa15.29■□□□□ 0.04
CLNS1A-204ENST00000525428 FAM50AQ14320 339 aaKnown RBP15.28■□□□□ 0.04
CLNS1A-204ENST00000525428 IQGAP2Q13576 1575 aa15.28■□□□□ 0.04
CLNS1A-204ENST00000525428 WASHC2AQ641Q2 1341 aa15.27■□□□□ 0.04
CLNS1A-204ENST00000525428 CNGB1Q14028 1251 aaPredicted RBP15.26■□□□□ 0.03
CLNS1A-204ENST00000525428 PKNOX2Q96KN3 472 aa15.25■□□□□ 0.03
CLNS1A-204ENST00000525428 NUP160Q12769 1436 aa15.23■□□□□ 0.03
CLNS1A-204ENST00000525428 PCF11O94913 1555 aaKnown RBP15.22■□□□□ 0.03
CLNS1A-204ENST00000525428 SETD5Q9C0A6 1442 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms