RNA–Protein interactions for RNA: ENST00000524361.5

LINC00534-204, long intergenic non-protein coding RNA 534, humanhuman

TSL 3

Gene LINC00534, Length 620 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-204ENST00000524361 TDRD9Q8NDG6 1382 aaKnown RBP11.2□□□□□ -0.62
LINC00534-204ENST00000524361 ABCC8Q09428 1581 aa11.2□□□□□ -0.62
LINC00534-204ENST00000524361 RAD54L2Q9Y4B4 1467 aa11.19□□□□□ -0.62
LINC00534-204ENST00000524361 SOGA1O94964 1423 aa11.18□□□□□ -0.62
LINC00534-204ENST00000524361 POLA2Q14181 598 aa11.18□□□□□ -0.62
LINC00534-204ENST00000524361 DNMBPQ6XZF7 1577 aa11.17□□□□□ -0.62
LINC00534-204ENST00000524361 POLA1P09884 1462 aaPredicted RBP11.16□□□□□ -0.62
LINC00534-204ENST00000524361 PRDM2Q13029 1718 aa11.12□□□□□ -0.63
LINC00534-204ENST00000524361 EIF4G3O43432 1585 aaKnown RBP11.12□□□□□ -0.63
LINC00534-204ENST00000524361 CHMP7Q8WUX9 453 aaPredicted RBP11.12□□□□□ -0.63
LINC00534-204ENST00000524361 ARHGEF11O15085 1522 aa11.11□□□□□ -0.63
LINC00534-204ENST00000524361 RIMBP3CA6NJZ7 1639 aa11.11□□□□□ -0.63
LINC00534-204ENST00000524361 RIMBP3BA6NNM3 1639 aa11.11□□□□□ -0.63
LINC00534-204ENST00000524361 TARBP1Q13395 1621 aaKnown RBP11.11□□□□□ -0.63
LINC00534-204ENST00000524361 RIMBP3Q9UFD9 1639 aa11.11□□□□□ -0.63
LINC00534-204ENST00000524361 FGD5Q6ZNL6 1462 aa11.1□□□□□ -0.63
LINC00534-204ENST00000524361 CUX1P39880 1505 aa11.08□□□□□ -0.64
LINC00534-204ENST00000524361 SNAPC4Q5SXM2 1469 aa11.06□□□□□ -0.64
LINC00534-204ENST00000524361 POTEHQ6S545 545 aa11.03□□□□□ -0.64
LINC00534-204ENST00000524361 ARAP1Q96P48 1450 aa11.02□□□□□ -0.65
LINC00534-204ENST00000524361 GRIN2BQ13224 1484 aa11.01□□□□□ -0.65
LINC00534-204ENST00000524361 CHD1O14646 1710 aa11.01□□□□□ -0.65
LINC00534-204ENST00000524361 GAPVD1Q14C86 1478 aa11□□□□□ -0.65
LINC00534-204ENST00000524361 CSRNP3Q8WYN3 585 aa10.99□□□□□ -0.65
LINC00534-204ENST00000524361 RBM42Q9BTD8 480 aaKnown RBP10.97□□□□□ -0.65
LINC00534-204ENST00000524361 MAGI1Q96QZ7 1491 aaPredicted RBP10.97□□□□□ -0.65
LINC00534-204ENST00000524361 SYNJ2O15056 1496 aa10.96□□□□□ -0.65
LINC00534-204ENST00000524361 WRNQ14191 1432 aaPredicted RBP eCLIP10.94□□□□□ -0.663e-6■■■■■ 41.8
LINC00534-204ENST00000524361 ABCA10Q8WWZ4 1543 aa10.94□□□□□ -0.66
LINC00534-204ENST00000524361 CLASP1Q7Z460 1538 aa10.93□□□□□ -0.66
LINC00534-204ENST00000524361 SYNJ1O43426 1573 aa10.92□□□□□ -0.66
LINC00534-204ENST00000524361 ATXN8OSP0DMR3 200 aa10.92□□□□□ -0.66
LINC00534-204ENST00000524361 WDR97A6NE52 1622 aa10.89□□□□□ -0.67
LINC00534-204ENST00000524361 ZBTB12Q9Y330 459 aaPredicted RBP10.87□□□□□ -0.67
LINC00534-204ENST00000524361 GRIN2AQ12879 1464 aa10.87□□□□□ -0.67
LINC00534-204ENST00000524361 ABCA5Q8WWZ7 1642 aa10.86□□□□□ -0.67
LINC00534-204ENST00000524361 ERCC6L2Q5T890 1561 aa10.85□□□□□ -0.67
LINC00534-204ENST00000524361 FHAD1B1AJZ9 1412 aa10.84□□□□□ -0.67
LINC00534-204ENST00000524361 JPH4Q96JJ6 628 aa10.84□□□□□ -0.67
LINC00534-204ENST00000524361 PBRM1Q86U86 1689 aa10.83□□□□□ -0.68
LINC00534-204ENST00000524361 TOP2BQ02880 1626 aa10.83□□□□□ -0.68
LINC00534-204ENST00000524361 NUP160Q12769 1436 aa10.83□□□□□ -0.68
LINC00534-204ENST00000524361 CEP170Q5SW79 1584 aa10.81□□□□□ -0.68
LINC00534-204ENST00000524361 ADAMTS12P58397 1594 aa10.79□□□□□ -0.68
LINC00534-204ENST00000524361 PRG4Q92954 1404 aaPredicted RBP10.79□□□□□ -0.68
LINC00534-204ENST00000524361 BIVM-ERCC5R4GMW8 1640 aa10.79□□□□□ -0.68
LINC00534-204ENST00000524361 TTBK1Q5TCY1 1321 aaPredicted RBP10.79□□□□□ -0.68
LINC00534-204ENST00000524361 CHRDL2Q6WN34 429 aa10.78□□□□□ -0.68
LINC00534-204ENST00000524361 IGF1RP08069 1367 aa10.77□□□□□ -0.68
LINC00534-204ENST00000524361 AKT1S1Q96B36 256 aa10.77□□□□□ -0.69
LINC00534-204ENST00000524361 ERICH3Q5RHP9 1530 aa10.76□□□□□ -0.69
LINC00534-204ENST00000524361 NPM1P06748 294 aaKnown RBP eCLIP10.73□□□□□ -0.69
LINC00534-204ENST00000524361 FAM69CQ0P6D2 419 aa10.72□□□□□ -0.69
LINC00534-204ENST00000524361 AMER1Q5JTC6 1135 aaPredicted RBP10.72□□□□□ -0.69
LINC00534-204ENST00000524361 KIF27Q86VH2 1401 aa10.71□□□□□ -0.69
LINC00534-204ENST00000524361 REM2Q8IYK8 340 aaPredicted RBP10.71□□□□□ -0.69
LINC00534-204ENST00000524361 CARMIL1Q5VZK9 1371 aa10.69□□□□□ -0.7
LINC00534-204ENST00000524361 MKRN4PQ13434 485 aaPredicted RBP10.68□□□□□ -0.7
LINC00534-204ENST00000524361 SHROOM2Q13796 1616 aa10.68□□□□□ -0.7
LINC00534-204ENST00000524361 RTN4Q9NQC3 1192 aaKnown RBP10.67□□□□□ -0.7
LINC00534-204ENST00000524361 KIAA0586Q9BVV6 1533 aa10.66□□□□□ -0.7
LINC00534-204ENST00000524361 PTPRGP23470 1445 aa10.64□□□□□ -0.71
LINC00534-204ENST00000524361 RUSC2Q8N2Y8 1516 aa10.63□□□□□ -0.71
LINC00534-204ENST00000524361 ABCC10Q5T3U5 1492 aa10.6□□□□□ -0.71
LINC00534-204ENST00000524361 PITPNM1O00562 1244 aa10.59□□□□□ -0.71
LINC00534-204ENST00000524361 TNIKQ9UKE5 1360 aa10.58□□□□□ -0.72
LINC00534-204ENST00000524361 SPDYE2BA6NHP3 402 aa10.58□□□□□ -0.72
LINC00534-204ENST00000524361 SPDYE6P0CI01 402 aa10.58□□□□□ -0.72
LINC00534-204ENST00000524361 SPDYE2Q495Y8 402 aa10.58□□□□□ -0.72
LINC00534-204ENST00000524361 ADCY10Q96PN6 1610 aa10.57□□□□□ -0.72
LINC00534-204ENST00000524361 CARMIL2Q6F5E8 1435 aa10.57□□□□□ -0.72
LINC00534-204ENST00000524361 PIP4P2Q8N4L2 257 aa10.56□□□□□ -0.72
LINC00534-204ENST00000524361 CUL7Q14999 1698 aa10.54□□□□□ -0.72
LINC00534-204ENST00000524361 MAPKBP1O60336 1514 aa10.53□□□□□ -0.72
LINC00534-204ENST00000524361 RAPGEF2Q9Y4G8 1499 aa10.53□□□□□ -0.72
LINC00534-204ENST00000524361 DISP1Q96F81 1524 aa10.52□□□□□ -0.73
LINC00534-204ENST00000524361 KIF13AQ9H1H9 1805 aa10.51□□□□□ -0.73
LINC00534-204ENST00000524361 ASXL2Q76L83 1435 aa10.51□□□□□ -0.73
LINC00534-204ENST00000524361 UACAQ9BZF9 1416 aa10.51□□□□□ -0.73
LINC00534-204ENST00000524361 KDM4FA0A1W2PPD8 638 aa10.51□□□□□ -0.73
LINC00534-204ENST00000524361 P3H3Q8IVL6 736 aa10.51□□□□□ -0.73
LINC00534-204ENST00000524361 ABCC2Q92887 1545 aa10.5□□□□□ -0.73
LINC00534-204ENST00000524361 ARID3CA6NKF2 412 aa10.5□□□□□ -0.73
LINC00534-204ENST00000524361 FXR2P51116 673 aaKnown RBP eCLIP10.5□□□□□ -0.73
LINC00534-204ENST00000524361 KCNH8Q96L42 1107 aa10.5□□□□□ -0.73
LINC00534-204ENST00000524361 IQGAP2Q13576 1575 aa10.5□□□□□ -0.73
LINC00534-204ENST00000524361 DIP2BQ9P265 1576 aa10.5□□□□□ -0.73
LINC00534-204ENST00000524361 SSUH2Q9Y2M2 353 aa10.49□□□□□ -0.73
LINC00534-204ENST00000524361 RANGAP1P46060 587 aaPredicted RBP10.48□□□□□ -0.73
LINC00534-204ENST00000524361 PLB1Q6P1J6 1458 aa10.47□□□□□ -0.73
LINC00534-204ENST00000524361 FAM9AQ8IZU1 332 aaPredicted RBP10.46□□□□□ -0.73
LINC00534-204ENST00000524361 ZNF692Q9BU19 519 aaPredicted RBP10.46□□□□□ -0.73
LINC00534-204ENST00000524361 UHRF1BP1LA0JNW5 1464 aa10.45□□□□□ -0.74
LINC00534-204ENST00000524361 UGGT2Q9NYU1 1516 aa10.44□□□□□ -0.74
LINC00534-204ENST00000524361 KDM6BO15054 1643 aa10.44□□□□□ -0.74
LINC00534-204ENST00000524361 COL17A1Q9UMD9 1497 aaPredicted RBP10.43□□□□□ -0.74
LINC00534-204ENST00000524361 TSPOAP1O95153 1857 aa10.43□□□□□ -0.74
LINC00534-204ENST00000524361 KDM5BQ9UGL1 1544 aa10.43□□□□□ -0.74
LINC00534-204ENST00000524361 EPRSP07814 1512 aaKnown RBP10.42□□□□□ -0.74
LINC00534-204ENST00000524361 PRXQ9BXM0 1461 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms