RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 DNMBPQ6XZF7 1577 aa26.01■■□□□ 1.75
IKBKB-228ENST00000523517 PHLDB1Q86UU1 1377 aa26.01■■□□□ 1.75
IKBKB-228ENST00000523517 ABCA10Q8WWZ4 1543 aa26■■□□□ 1.75
IKBKB-228ENST00000523517 RAD54L2Q9Y4B4 1467 aa25.99■■□□□ 1.75
IKBKB-228ENST00000523517 P3H3Q8IVL6 736 aa25.97■■□□□ 1.75
IKBKB-228ENST00000523517 SETD5Q9C0A6 1442 aa25.97■■□□□ 1.75
IKBKB-228ENST00000523517 TOPBP1Q92547 1522 aa25.96■■□□□ 1.75
IKBKB-228ENST00000523517 POLA1P09884 1462 aaPredicted RBP25.96■■□□□ 1.75
IKBKB-228ENST00000523517 PCF11O94913 1555 aaKnown RBP25.94■■□□□ 1.74
IKBKB-228ENST00000523517 MAPKBP1O60336 1514 aa25.94■■□□□ 1.74
IKBKB-228ENST00000523517 CFAP43Q8NDM7 1665 aa25.92■■□□□ 1.74
IKBKB-228ENST00000523517 FHOD3Q2V2M9 1422 aa25.9■■□□□ 1.74
IKBKB-228ENST00000523517 FAM50AQ14320 339 aaKnown RBP25.9■■□□□ 1.74
IKBKB-228ENST00000523517 EFCAB5A4FU69 1503 aa25.89■■□□□ 1.73
IKBKB-228ENST00000523517 ATP1B4Q9UN42 357 aaPredicted RBP25.89■■□□□ 1.73
IKBKB-228ENST00000523517 NESP48681 1621 aa25.88■■□□□ 1.73
IKBKB-228ENST00000523517 FYCO1Q9BQS8 1478 aa25.87■■□□□ 1.73
IKBKB-228ENST00000523517 CASKIN1Q8WXD9 1431 aa25.86■■□□□ 1.73
IKBKB-228ENST00000523517 AQRO60306 1485 aaKnown RBP eCLIP25.85■■□□□ 1.73
IKBKB-228ENST00000523517 CUL7Q14999 1698 aa25.84■■□□□ 1.73
IKBKB-228ENST00000523517 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.79■■□□□ 1.72
IKBKB-228ENST00000523517 FMN1Q68DA7 1419 aa25.76■■□□□ 1.71
IKBKB-228ENST00000523517 URB2Q14146 1524 aaKnown RBP25.74■■□□□ 1.71
IKBKB-228ENST00000523517 SIN3AQ96ST3 1273 aa25.73■■□□□ 1.71
IKBKB-228ENST00000523517 CTTNBP2Q8WZ74 1663 aa25.72■■□□□ 1.71
IKBKB-228ENST00000523517 LAMC3Q9Y6N6 1575 aa25.71■■□□□ 1.71
IKBKB-228ENST00000523517 TIMELESSQ9UNS1 1208 aa25.7■■□□□ 1.71
IKBKB-228ENST00000523517 SNAPC4Q5SXM2 1469 aa25.69■■□□□ 1.7
IKBKB-228ENST00000523517 WDR97A6NE52 1622 aa25.67■■□□□ 1.7
IKBKB-228ENST00000523517 TDRD9Q8NDG6 1382 aaKnown RBP25.67■■□□□ 1.7
IKBKB-228ENST00000523517 FGD6Q6ZV73 1430 aa25.66■■□□□ 1.7
IKBKB-228ENST00000523517 ABCA5Q8WWZ7 1642 aa25.63■■□□□ 1.69
IKBKB-228ENST00000523517 MTUS2Q5JR59 1369 aa25.62■■□□□ 1.69
IKBKB-228ENST00000523517 GAPVD1Q14C86 1478 aa25.62■■□□□ 1.69
IKBKB-228ENST00000523517 SAMD9Q5K651 1589 aa25.6■■□□□ 1.69
IKBKB-228ENST00000523517 PDS5BQ9NTI5 1447 aa25.59■■□□□ 1.69
IKBKB-228ENST00000523517 PPP1R15AO75807 674 aaPredicted RBP25.56■■□□□ 1.68
IKBKB-228ENST00000523517 GRIN2BQ13224 1484 aa25.55■■□□□ 1.68
IKBKB-228ENST00000523517 DDX10Q13206 875 aaKnown RBP25.52■■□□□ 1.68
IKBKB-228ENST00000523517 HFM1A2PYH4 1435 aa25.52■■□□□ 1.68
IKBKB-228ENST00000523517 PTPRKQ15262 1439 aa25.52■■□□□ 1.68
IKBKB-228ENST00000523517 SUPT16HQ9Y5B9 1047 aaKnown RBP25.52■■□□□ 1.68
IKBKB-228ENST00000523517 KCNH8Q96L42 1107 aa25.51■■□□□ 1.67
IKBKB-228ENST00000523517 NCOA2Q15596 1464 aa25.51■■□□□ 1.67
IKBKB-228ENST00000523517 CCDC18Q5T9S5 1454 aa25.51■■□□□ 1.67
IKBKB-228ENST00000523517 THOC2Q8NI27 1593 aaKnown RBP25.49■■□□□ 1.67
IKBKB-228ENST00000523517 MYOM3Q5VTT5 1437 aa25.49■■□□□ 1.67
IKBKB-228ENST00000523517 UACAQ9BZF9 1416 aa25.47■■□□□ 1.67
IKBKB-228ENST00000523517 EHBP1L1Q8N3D4 1523 aa25.44■■□□□ 1.66
IKBKB-228ENST00000523517 PTPN23Q9H3S7 1636 aa25.44■■□□□ 1.66
IKBKB-228ENST00000523517 DNAJC5BQ9UF47 199 aa25.44■■□□□ 1.66
IKBKB-228ENST00000523517 LRRIQ1Q96JM4 1722 aa25.43■■□□□ 1.66
IKBKB-228ENST00000523517 NAIPQ13075 1403 aa25.43■■□□□ 1.66
IKBKB-228ENST00000523517 TONSLQ96HA7 1378 aa25.43■■□□□ 1.66
IKBKB-228ENST00000523517 TARBP1Q13395 1621 aaKnown RBP25.4■■□□□ 1.66
IKBKB-228ENST00000523517 SUPT6HQ7KZ85 1726 aaKnown RBP25.4■■□□□ 1.66
IKBKB-228ENST00000523517 HIRIP3Q9BW71 556 aaPredicted RBP25.38■■□□□ 1.65
IKBKB-228ENST00000523517 UGGT2Q9NYU1 1516 aa25.38■■□□□ 1.65
IKBKB-228ENST00000523517 ARHGEF11O15085 1522 aa25.37■■□□□ 1.65
IKBKB-228ENST00000523517 KIF21AQ7Z4S6 1674 aa25.36■■□□□ 1.65
IKBKB-228ENST00000523517 MAGI3Q5TCQ9 1506 aa25.34■■□□□ 1.65
IKBKB-228ENST00000523517 CCER2I3L3R5 266 aa25.31■■□□□ 1.64
IKBKB-228ENST00000523517 TCOF1Q13428 1488 aaKnown RBP25.3■■□□□ 1.64
IKBKB-228ENST00000523517 ANP32CO43423 234 aa25.29■■□□□ 1.64
IKBKB-228ENST00000523517 HECW1Q76N89 1606 aa25.27■■□□□ 1.64
IKBKB-228ENST00000523517 IQGAP2Q13576 1575 aa25.25■■□□□ 1.63
IKBKB-228ENST00000523517 RRP7BPQ9NSQ0 103 aa25.25■■□□□ 1.63
IKBKB-228ENST00000523517 EPRSP07814 1512 aaKnown RBP25.25■■□□□ 1.63
IKBKB-228ENST00000523517 PBRM1Q86U86 1689 aa25.23■■□□□ 1.63
IKBKB-228ENST00000523517 ADAMTS12P58397 1594 aa25.22■■□□□ 1.63
IKBKB-228ENST00000523517 CHIC2Q9UKJ5 165 aa25.22■■□□□ 1.63
IKBKB-228ENST00000523517 KDM5BQ9UGL1 1544 aa25.22■■□□□ 1.63
IKBKB-228ENST00000523517 AKNAQ7Z591 1439 aa25.21■■□□□ 1.63
IKBKB-228ENST00000523517 MYT1Q01538 1121 aa25.2■■□□□ 1.63
IKBKB-228ENST00000523517 MIA2Q96PC5 1412 aa25.19■■□□□ 1.62
IKBKB-228ENST00000523517 MRC2Q9UBG0 1479 aa25.17■■□□□ 1.62
IKBKB-228ENST00000523517 CDK13Q14004 1512 aaKnown RBP25.16■■□□□ 1.62
IKBKB-228ENST00000523517 WDR62O43379 1518 aa25.16■■□□□ 1.62
IKBKB-228ENST00000523517 DENND4BO75064 1496 aaPredicted RBP25.15■■□□□ 1.62
IKBKB-228ENST00000523517 TRIM52Q96A61 297 aa25.15■■□□□ 1.62
IKBKB-228ENST00000523517 GCC2Q8IWJ2 1684 aa25.14■■□□□ 1.62
IKBKB-228ENST00000523517 ARID3CA6NKF2 412 aa25.1■■□□□ 1.61
IKBKB-228ENST00000523517 MPHOSPH9Q99550 1183 aa25.09■■□□□ 1.61
IKBKB-228ENST00000523517 FKBP8Q14318 412 aa25.08■■□□□ 1.61
IKBKB-228ENST00000523517 TSHZ2Q9NRE2 1034 aa25.08■■□□□ 1.61
IKBKB-228ENST00000523517 KDM6BO15054 1643 aa25.08■■□□□ 1.61
IKBKB-228ENST00000523517 IFT140Q96RY7 1462 aa25.06■■□□□ 1.6
IKBKB-228ENST00000523517 ZNF608Q9ULD9 1512 aaPredicted RBP25.04■■□□□ 1.6
IKBKB-228ENST00000523517 HSPA5P11021 654 aaKnown RBP25.04■■□□□ 1.6
IKBKB-228ENST00000523517 KIAA0586Q9BVV6 1533 aa25.04■■□□□ 1.6
IKBKB-228ENST00000523517 BCANQ96GW7 911 aa25.02■■□□□ 1.6
IKBKB-228ENST00000523517 ROCK1Q13464 1354 aa25.02■■□□□ 1.6
IKBKB-228ENST00000523517 DISP1Q96F81 1524 aa25.01■■□□□ 1.59
IKBKB-228ENST00000523517 WASHC2AQ641Q2 1341 aa25■■□□□ 1.59
IKBKB-228ENST00000523517 DAPK1P53355 1430 aa25■■□□□ 1.59
IKBKB-228ENST00000523517 NEFLP07196 543 aa24.99■■□□□ 1.59
IKBKB-228ENST00000523517 EIF4G2P78344 907 aaKnown RBP eCLIP24.99■■□□□ 1.59
IKBKB-228ENST00000523517 KIAA0556O60303 1618 aa24.98■■□□□ 1.59
IKBKB-228ENST00000523517 L3MBTL2Q969R5 705 aa24.98■■□□□ 1.59
IKBKB-228ENST00000523517 ABCC5O15440 1437 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms