RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 CECR2Q9BXF3 1484 aa12.79□□□□□ -0.36
PABPC1-220ENST00000522658 CC2D2AQ9P2K1 1620 aa12.78□□□□□ -0.36
PABPC1-220ENST00000522658 NPM1P06748 294 aaKnown RBP eCLIP12.76□□□□□ -0.37
PABPC1-220ENST00000522658 EIF4G1Q04637 1599 aaKnown RBP12.72□□□□□ -0.37
PABPC1-220ENST00000522658 LHX8Q68G74 356 aa12.71□□□□□ -0.37
PABPC1-220ENST00000522658 GALR2O43603 387 aaPredicted RBP12.69□□□□□ -0.38
PABPC1-220ENST00000522658 PAK3O75914 559 aaPredicted RBP12.69□□□□□ -0.38
PABPC1-220ENST00000522658 PHF12Q96QT6 1004 aa12.68□□□□□ -0.38
PABPC1-220ENST00000522658 DCBLD2Q96PD2 775 aa12.66□□□□□ -0.38
PABPC1-220ENST00000522658 MIER1Q8N108 512 aa12.56□□□□□ -0.4
PABPC1-220ENST00000522658 FKBP8Q14318 412 aa12.55□□□□□ -0.4
PABPC1-220ENST00000522658 CCDC61Q9Y6R9 512 aa12.54□□□□□ -0.4
PABPC1-220ENST00000522658 TSPYL2Q9H2G4 693 aaPredicted RBP12.53□□□□□ -0.4
PABPC1-220ENST00000522658 MS4A3Q96HJ5 214 aa12.52□□□□□ -0.41
PABPC1-220ENST00000522658 PLEKHG5O94827 1062 aa12.5□□□□□ -0.41
PABPC1-220ENST00000522658 RASEFQ8IZ41 740 aa12.48□□□□□ -0.41
PABPC1-220ENST00000522658 PELP1Q8IZL8 1130 aaKnown RBP12.48□□□□□ -0.41
PABPC1-220ENST00000522658 ASTLQ6HA08 431 aaPredicted RBP12.46□□□□□ -0.41
PABPC1-220ENST00000522658 PLCD3Q8N3E9 789 aa12.45□□□□□ -0.42
PABPC1-220ENST00000522658 KIF12Q96FN5 646 aa12.45□□□□□ -0.42
PABPC1-220ENST00000522658 ATMINO43313 823 aaPredicted RBP12.42□□□□□ -0.42
PABPC1-220ENST00000522658 POTEB2H3BUK9 544 aa12.41□□□□□ -0.42
PABPC1-220ENST00000522658 NUBP1P53384 320 aa12.39□□□□□ -0.43
PABPC1-220ENST00000522658 ZBTB47Q9UFB7 747 aaPredicted RBP12.37□□□□□ -0.43
PABPC1-220ENST00000522658 MAP3K13O43283 966 aa12.36□□□□□ -0.43
PABPC1-220ENST00000522658 DNAJC5Q9H3Z4 198 aa12.36□□□□□ -0.43
PABPC1-220ENST00000522658 ERCC6Q03468 1493 aa12.35□□□□□ -0.43
PABPC1-220ENST00000522658 OTUD5Q96G74 571 aa12.34□□□□□ -0.43
PABPC1-220ENST00000522658 TRPC6Q9Y210 931 aa12.34□□□□□ -0.43
PABPC1-220ENST00000522658 ATN1P54259 1190 aaPredicted RBP12.32□□□□□ -0.44
PABPC1-220ENST00000522658 SLC39A7Q92504 469 aa12.32□□□□□ -0.44
PABPC1-220ENST00000522658 METRNQ9UJH8 293 aa12.32□□□□□ -0.44
PABPC1-220ENST00000522658 CUX2O14529 1486 aa12.31□□□□□ -0.44
PABPC1-220ENST00000522658 C7P10643 843 aa12.3□□□□□ -0.44
PABPC1-220ENST00000522658 BMP2KQ9NSY1 1161 aaPredicted RBP12.3□□□□□ -0.44
PABPC1-220ENST00000522658 TIE1P35590 1138 aa12.28□□□□□ -0.44
PABPC1-220ENST00000522658 FBXO3Q9UK99 471 aa12.28□□□□□ -0.44
PABPC1-220ENST00000522658 SGIP1Q9BQI5 828 aa12.27□□□□□ -0.45
PABPC1-220ENST00000522658 POTEJP0CG39 1038 aa12.25□□□□□ -0.45
PABPC1-220ENST00000522658 FAM212AQ96EL1 285 aa12.23□□□□□ -0.45
PABPC1-220ENST00000522658 POTEFA5A3E0 1075 aa12.22□□□□□ -0.45
PABPC1-220ENST00000522658 PCDHB13Q9Y5F0 798 aa12.22□□□□□ -0.45
PABPC1-220ENST00000522658 SMARCA2P51531 1590 aa12.22□□□□□ -0.45
PABPC1-220ENST00000522658 NCAPD3P42695 1498 aa12.21□□□□□ -0.45
PABPC1-220ENST00000522658 TTLL13PA6NNM8 815 aa12.21□□□□□ -0.45
PABPC1-220ENST00000522658 ATAD2BQ9ULI0 1458 aa12.19□□□□□ -0.46
PABPC1-220ENST00000522658 HMGXB3Q12766 1538 aa12.18□□□□□ -0.46
PABPC1-220ENST00000522658 IFNL1Q8IU54 200 aa12.18□□□□□ -0.46
PABPC1-220ENST00000522658 VASPP50552 380 aaPredicted RBP12.17□□□□□ -0.46
PABPC1-220ENST00000522658 SMARCA4P51532 1647 aa12.16□□□□□ -0.46
PABPC1-220ENST00000522658 BAZ1BQ9UIG0 1483 aaKnown RBP12.14□□□□□ -0.47
PABPC1-220ENST00000522658 TRIM35Q9UPQ4 493 aa12.12□□□□□ -0.47
PABPC1-220ENST00000522658 BAZ1AQ9NRL2 1556 aaPredicted RBP12.12□□□□□ -0.47
PABPC1-220ENST00000522658 DCAF8Q5TAQ9 597 aa12.11□□□□□ -0.47
PABPC1-220ENST00000522658 COLQQ9Y215 455 aaPredicted RBP12.11□□□□□ -0.47
PABPC1-220ENST00000522658 MAMSTRQ6ZN01 415 aa12.1□□□□□ -0.47
PABPC1-220ENST00000522658 IER5LQ5T953 404 aa12.08□□□□□ -0.48
PABPC1-220ENST00000522658 NESP48681 1621 aa12.08□□□□□ -0.48
PABPC1-220ENST00000522658 PYGBP11216 843 aa12.07□□□□□ -0.48
PABPC1-220ENST00000522658 TMEM106CQ9BVX2 250 aa12.05□□□□□ -0.48
PABPC1-220ENST00000522658 LAMC3Q9Y6N6 1575 aa12.05□□□□□ -0.48
PABPC1-220ENST00000522658 KLHL34Q8N239 644 aa12.04□□□□□ -0.48
PABPC1-220ENST00000522658 SCUBE2Q9NQ36 999 aa12.03□□□□□ -0.48
PABPC1-220ENST00000522658 THOC2Q8NI27 1593 aaKnown RBP12.02□□□□□ -0.49
PABPC1-220ENST00000522658 SEC24BO95487 1268 aa12.02□□□□□ -0.49
PABPC1-220ENST00000522658 PDS5BQ9NTI5 1447 aa12.01□□□□□ -0.49
PABPC1-220ENST00000522658 GSE1Q14687 1217 aa12□□□□□ -0.49
PABPC1-220ENST00000522658 PCDHB8Q9UN66 801 aa12□□□□□ -0.49
PABPC1-220ENST00000522658 PEG3Q9GZU2 1588 aa12□□□□□ -0.49
PABPC1-220ENST00000522658 IFNLR1Q8IU57 520 aaPredicted RBP11.98□□□□□ -0.49
PABPC1-220ENST00000522658 CHRM1P11229 460 aaPredicted RBP11.97□□□□□ -0.49
PABPC1-220ENST00000522658 IRX5P78411 483 aaPredicted RBP11.97□□□□□ -0.49
PABPC1-220ENST00000522658 KIF21AQ7Z4S6 1674 aa11.96□□□□□ -0.5
PABPC1-220ENST00000522658 LCE2DQ5TA82 110 aaPredicted RBP11.95□□□□□ -0.5
PABPC1-220ENST00000522658 POTEMA6NI47 508 aa11.94□□□□□ -0.5
PABPC1-220ENST00000522658 MROH2BQ7Z745 1585 aa11.92□□□□□ -0.5
PABPC1-220ENST00000522658 POTEGQ6S5H5 508 aa11.91□□□□□ -0.5
PABPC1-220ENST00000522658 ZNF467Q7Z7K2 595 aaPredicted RBP11.91□□□□□ -0.5
PABPC1-220ENST00000522658 PLCG2P16885 1265 aa11.9□□□□□ -0.5
PABPC1-220ENST00000522658 TRIM41Q8WV44 630 aa11.9□□□□□ -0.5
PABPC1-220ENST00000522658 SPOCK2Q92563 424 aa11.9□□□□□ -0.5
PABPC1-220ENST00000522658 MRC2Q9UBG0 1479 aa11.89□□□□□ -0.51
PABPC1-220ENST00000522658 OCEL1Q9H607 264 aa11.88□□□□□ -0.51
PABPC1-220ENST00000522658 CADPSQ9ULU8 1353 aa11.88□□□□□ -0.51
PABPC1-220ENST00000522658 CEP164Q9UPV0 1460 aa11.85□□□□□ -0.51
PABPC1-220ENST00000522658 FAM163AQ96GL9 167 aaPredicted RBP11.85□□□□□ -0.51
PABPC1-220ENST00000522658 WDR62O43379 1518 aa11.83□□□□□ -0.52
PABPC1-220ENST00000522658 PSEN1P49768 467 aa11.81□□□□□ -0.52
PABPC1-220ENST00000522658 PDCD7Q8N8D1 485 aaKnown RBP11.8□□□□□ -0.52
PABPC1-220ENST00000522658 SLAIN1Q8ND83 568 aa11.8□□□□□ -0.52
PABPC1-220ENST00000522658 CIZ1Q9ULV3 898 aaPredicted RBP11.8□□□□□ -0.52
PABPC1-220ENST00000522658 WIZO95785 1651 aa11.8□□□□□ -0.52
PABPC1-220ENST00000522658 FANCD2Q9BXW9 1451 aa11.78□□□□□ -0.52
PABPC1-220ENST00000522658 PLSCR2Q9NRY7 297 aa11.77□□□□□ -0.53
PABPC1-220ENST00000522658 PDAP1Q13442 181 aaKnown RBP11.76□□□□□ -0.53
PABPC1-220ENST00000522658 PCDH10Q9P2E7 1040 aa11.76□□□□□ -0.53
PABPC1-220ENST00000522658 MKRN3Q13064 507 aaKnown RBP11.75□□□□□ -0.53
PABPC1-220ENST00000522658 ILDR1Q86SU0 546 aaPredicted RBP11.75□□□□□ -0.53
PABPC1-220ENST00000522658 GOLGA2Q08379 1002 aa11.72□□□□□ -0.53
PABPC1-220ENST00000522658 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms