RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 PDE4CQ08493 712 aa16.76■□□□□ 0.27
SPIDR-217ENST00000522117 TNIKQ9UKE5 1360 aa16.76■□□□□ 0.27
SPIDR-217ENST00000522117 TRIM52Q96A61 297 aa16.76■□□□□ 0.27
SPIDR-217ENST00000522117 RTL5Q5HYW3 569 aaPredicted RBP16.74■□□□□ 0.27
SPIDR-217ENST00000522117 C11orf95C9JLR9 678 aaPredicted RBP16.7■□□□□ 0.26
SPIDR-217ENST00000522117 WASHC2AQ641Q2 1341 aa16.7■□□□□ 0.26
SPIDR-217ENST00000522117 IRX6P78412 446 aaPredicted RBP16.69■□□□□ 0.26
SPIDR-217ENST00000522117 BAZ1BQ9UIG0 1483 aaKnown RBP16.65■□□□□ 0.26
SPIDR-217ENST00000522117 CCER2I3L3R5 266 aa16.64■□□□□ 0.25
SPIDR-217ENST00000522117 WASHC2CQ9Y4E1 1318 aa16.64■□□□□ 0.25
SPIDR-217ENST00000522117 DNAJC5BQ9UF47 199 aa16.63■□□□□ 0.25
SPIDR-217ENST00000522117 DDX10Q13206 875 aaKnown RBP16.62■□□□□ 0.25
SPIDR-217ENST00000522117 PPP4R2Q9NY27 417 aa16.62■□□□□ 0.25
SPIDR-217ENST00000522117 IPO9Q96P70 1041 aaKnown RBP16.6■□□□□ 0.25
SPIDR-217ENST00000522117 PPP1R15AO75807 674 aaPredicted RBP16.59■□□□□ 0.25
SPIDR-217ENST00000522117 ABCC8Q09428 1581 aa16.58■□□□□ 0.24
SPIDR-217ENST00000522117 BCL11BQ9C0K0 894 aaPredicted RBP16.56■□□□□ 0.24
SPIDR-217ENST00000522117 BRPF3Q9ULD4 1205 aa16.56■□□□□ 0.24
SPIDR-217ENST00000522117 ZBTB47Q9UFB7 747 aaPredicted RBP16.54■□□□□ 0.24
SPIDR-217ENST00000522117 NCAPD3P42695 1498 aa16.52■□□□□ 0.23
SPIDR-217ENST00000522117 FGD1P98174 961 aa16.52■□□□□ 0.23
SPIDR-217ENST00000522117 ZMYND15Q9H091 742 aa16.52■□□□□ 0.23
SPIDR-217ENST00000522117 CC2D2AQ9P2K1 1620 aa16.52■□□□□ 0.23
SPIDR-217ENST00000522117 RSPH6AQ9H0K4 717 aa16.51■□□□□ 0.23
SPIDR-217ENST00000522117 A0A0U1RQG5 324 aaPredicted RBP16.5■□□□□ 0.23
SPIDR-217ENST00000522117 B4GALNT3Q6L9W6 998 aa16.5■□□□□ 0.23
SPIDR-217ENST00000522117 ANP32AP39687 249 aaKnown RBP16.5■□□□□ 0.23
SPIDR-217ENST00000522117 HMGXB3Q12766 1538 aa16.48■□□□□ 0.23
SPIDR-217ENST00000522117 UBTFP17480 764 aaKnown RBP16.48■□□□□ 0.23
SPIDR-217ENST00000522117 USP35Q9P2H5 1018 aa16.47■□□□□ 0.23
SPIDR-217ENST00000522117 SOGA1O94964 1423 aa16.47■□□□□ 0.23
SPIDR-217ENST00000522117 ANP32CO43423 234 aa16.47■□□□□ 0.23
SPIDR-217ENST00000522117 TULP1O00294 542 aaPredicted RBP16.44■□□□□ 0.22
SPIDR-217ENST00000522117 NEFMP07197 916 aa16.44■□□□□ 0.22
SPIDR-217ENST00000522117 GLIPR1L2Q4G1C9 344 aa16.44■□□□□ 0.22
SPIDR-217ENST00000522117 EEA1Q15075 1411 aa16.44■□□□□ 0.22
SPIDR-217ENST00000522117 VSIG10Q8N0Z9 540 aa16.43■□□□□ 0.22
SPIDR-217ENST00000522117 GOLGA3Q08378 1498 aa16.42■□□□□ 0.22
SPIDR-217ENST00000522117 CLIP1P30622 1438 aa16.41■□□□□ 0.22
SPIDR-217ENST00000522117 HNRNPUQ00839 825 aaKnown RBP eCLIP16.41■□□□□ 0.22
SPIDR-217ENST00000522117 VPS8Q8N3P4 1428 aa16.4■□□□□ 0.22
SPIDR-217ENST00000522117 WDR97A6NE52 1622 aa16.38■□□□□ 0.21
SPIDR-217ENST00000522117 CUX2O14529 1486 aa16.38■□□□□ 0.21
SPIDR-217ENST00000522117 RUSC2Q8N2Y8 1516 aa16.37■□□□□ 0.21
SPIDR-217ENST00000522117 LAS1LQ9Y4W2 734 aaKnown RBP16.37■□□□□ 0.21
SPIDR-217ENST00000522117 MAPKBP1O60336 1514 aa16.35■□□□□ 0.21
SPIDR-217ENST00000522117 GSE1Q14687 1217 aa16.34■□□□□ 0.21
SPIDR-217ENST00000522117 FAM43AQ8N2R8 423 aa16.34■□□□□ 0.21
SPIDR-217ENST00000522117 PRDM2Q13029 1718 aa16.34■□□□□ 0.21
SPIDR-217ENST00000522117 SYNJ1O43426 1573 aa16.32■□□□□ 0.2
SPIDR-217ENST00000522117 TAF7LQ5H9L4 462 aa16.32■□□□□ 0.2
SPIDR-217ENST00000522117 AAMPQ13685 434 aa16.32■□□□□ 0.2
SPIDR-217ENST00000522117 PPM1GO15355 546 aaPredicted RBP16.29■□□□□ 0.2
SPIDR-217ENST00000522117 HOMEZQ8IX15 550 aa16.28■□□□□ 0.2
SPIDR-217ENST00000522117 HIRIP3Q9BW71 556 aaPredicted RBP16.28■□□□□ 0.2
SPIDR-217ENST00000522117 BIVM-ERCC5R4GMW8 1640 aa16.28■□□□□ 0.2
SPIDR-217ENST00000522117 NESP48681 1621 aa16.26■□□□□ 0.19
SPIDR-217ENST00000522117 FRAT1Q92837 279 aaPredicted RBP16.25■□□□□ 0.19
SPIDR-217ENST00000522117 RBM10P98175 930 aaKnown RBP16.25■□□□□ 0.19
SPIDR-217ENST00000522117 TOP2BQ02880 1626 aa16.25■□□□□ 0.19
SPIDR-217ENST00000522117 CEP164Q9UPV0 1460 aa16.24■□□□□ 0.19
SPIDR-217ENST00000522117 DHX37Q8IY37 1157 aaKnown RBP16.24■□□□□ 0.19
SPIDR-217ENST00000522117 SIN3AQ96ST3 1273 aa16.23■□□□□ 0.19
SPIDR-217ENST00000522117 RRBP1Q9P2E9 1410 aaKnown RBP16.23■□□□□ 0.19
SPIDR-217ENST00000522117 CFTRP13569 1480 aa16.22■□□□□ 0.19
SPIDR-217ENST00000522117 NPM2Q86SE8 214 aaKnown RBP16.19■□□□□ 0.18
SPIDR-217ENST00000522117 CADPSQ9ULU8 1353 aa16.19■□□□□ 0.18
SPIDR-217ENST00000522117 KIF21BO75037 1637 aa16.19■□□□□ 0.18
SPIDR-217ENST00000522117 CHMP4AQ9BY43 222 aa16.18■□□□□ 0.18
SPIDR-217ENST00000522117 DCAF11Q8TEB1 546 aa16.18■□□□□ 0.18
SPIDR-217ENST00000522117 RAB3GAP2Q9H2M9 1393 aa16.16■□□□□ 0.18
SPIDR-217ENST00000522117 NFKBIBQ15653 356 aa16.15■□□□□ 0.18
SPIDR-217ENST00000522117 RRP9O43818 475 aaKnown RBP16.14■□□□□ 0.17
SPIDR-217ENST00000522117 HSP90AA2PQ14568 343 aaPredicted RBP16.14■□□□□ 0.17
SPIDR-217ENST00000522117 RRAGDQ9NQL2 400 aaPredicted RBP16.13■□□□□ 0.17
SPIDR-217ENST00000522117 ZBED9Q6R2W3 1325 aa16.11■□□□□ 0.17
SPIDR-217ENST00000522117 KANK4Q5T7N3 995 aaPredicted RBP16.11■□□□□ 0.17
SPIDR-217ENST00000522117 PAXIP1Q6ZW49 1069 aaPredicted RBP16.11■□□□□ 0.17
SPIDR-217ENST00000522117 CUX1P39880 1505 aa16.11■□□□□ 0.17
SPIDR-217ENST00000522117 HAP1P54257 671 aaPredicted RBP16.1■□□□□ 0.17
SPIDR-217ENST00000522117 CCDC184Q52MB2 194 aa16.09■□□□□ 0.17
SPIDR-217ENST00000522117 RNF123Q5XPI4 1314 aa16.08■□□□□ 0.17
SPIDR-217ENST00000522117 CCNB3Q8WWL7 1395 aa16.07■□□□□ 0.16
SPIDR-217ENST00000522117 PDE4AP27815 886 aa16.07■□□□□ 0.16
SPIDR-217ENST00000522117 AKNAQ7Z591 1439 aa16.07■□□□□ 0.16
SPIDR-217ENST00000522117 BACH2Q9BYV9 841 aa16.05■□□□□ 0.16
SPIDR-217ENST00000522117 HSP90AA1P07900 732 aaKnown RBP16.03■□□□□ 0.16
SPIDR-217ENST00000522117 FANCD2Q9BXW9 1451 aa16.03■□□□□ 0.16
SPIDR-217ENST00000522117 SMG6Q86US8 1419 aaKnown RBP16.03■□□□□ 0.16
SPIDR-217ENST00000522117 TCERG1O14776 1098 aaKnown RBP16.03■□□□□ 0.16
SPIDR-217ENST00000522117 BRD2P25440 801 aaKnown RBP16.02■□□□□ 0.15
SPIDR-217ENST00000522117 SAMD1Q6SPF0 538 aaPredicted RBP16■□□□□ 0.15
SPIDR-217ENST00000522117 NAP1L5Q96NT1 182 aaPredicted RBP16■□□□□ 0.15
SPIDR-217ENST00000522117 SETD5Q9C0A6 1442 aa15.99■□□□□ 0.15
SPIDR-217ENST00000522117 DDRGK1Q96HY6 314 aa15.99■□□□□ 0.15
SPIDR-217ENST00000522117 FAM9BQ8IZU0 186 aa15.98■□□□□ 0.15
SPIDR-217ENST00000522117 ERICH3Q5RHP9 1530 aa15.98■□□□□ 0.15
SPIDR-217ENST00000522117 RAPGEF2Q9Y4G8 1499 aa15.98■□□□□ 0.15
SPIDR-217ENST00000522117 C14orf37Q86TY3 774 aa15.96■□□□□ 0.15
SPIDR-217ENST00000522117 ARAP1Q96P48 1450 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms