RNA–Protein interactions for RNA: ENST00000518428.1

AC048387.1-201, humanhuman

TSL 3 BASIC

Gene AC048387.1, Length 494 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC048387.1-201ENST00000518428 GTF3C3Q9Y5Q9 886 aa10.11□□□□□ -0.79
AC048387.1-201ENST00000518428 GABBR2O75899 941 aa10.09□□□□□ -0.79
AC048387.1-201ENST00000518428 ERICH6Q7L0X2 663 aa10.09□□□□□ -0.79
AC048387.1-201ENST00000518428 TSHZ2Q9NRE2 1034 aa10.09□□□□□ -0.79
AC048387.1-201ENST00000518428 ECM2O94769 699 aaPredicted RBP10.07□□□□□ -0.8
AC048387.1-201ENST00000518428 SPRYD3Q8NCJ5 442 aa10.07□□□□□ -0.8
AC048387.1-201ENST00000518428 NBR1Q14596 966 aa10.04□□□□□ -0.8
AC048387.1-201ENST00000518428 SPOCK2Q92563 424 aa10.01□□□□□ -0.81
AC048387.1-201ENST00000518428 DNAJC5Q9H3Z4 198 aa10.01□□□□□ -0.81
AC048387.1-201ENST00000518428 SPDYE1Q8NFV5 336 aaPredicted RBP10□□□□□ -0.81
AC048387.1-201ENST00000518428 PLCD3Q8N3E9 789 aa9.98□□□□□ -0.81
AC048387.1-201ENST00000518428 C19orf67A6NJJ6 358 aa9.96□□□□□ -0.82
AC048387.1-201ENST00000518428 RGL2O15211 777 aa9.96□□□□□ -0.82
AC048387.1-201ENST00000518428 MIER1Q8N108 512 aa9.96□□□□□ -0.82
AC048387.1-201ENST00000518428 HOMEZQ8IX15 550 aa9.94□□□□□ -0.82
AC048387.1-201ENST00000518428 KLHL34Q8N239 644 aa9.94□□□□□ -0.82
AC048387.1-201ENST00000518428 TMEM132AQ24JP5 1023 aa9.92□□□□□ -0.82
AC048387.1-201ENST00000518428 PLEKHG5O94827 1062 aa9.89□□□□□ -0.83
AC048387.1-201ENST00000518428 ZBTB47Q9UFB7 747 aaPredicted RBP9.89□□□□□ -0.83
AC048387.1-201ENST00000518428 CLEC11AQ9Y240 323 aa9.89□□□□□ -0.83
AC048387.1-201ENST00000518428 PRKAR2AP13861 404 aaKnown RBP9.88□□□□□ -0.83
AC048387.1-201ENST00000518428 POTEMA6NI47 508 aa9.87□□□□□ -0.83
AC048387.1-201ENST00000518428 POTEIP0CG38 1075 aa9.87□□□□□ -0.83
AC048387.1-201ENST00000518428 PRR29P0C7W0 189 aa9.85□□□□□ -0.83
AC048387.1-201ENST00000518428 CHGAP10645 457 aaKnown RBP9.85□□□□□ -0.83
AC048387.1-201ENST00000518428 CREBZFQ9NS37 354 aa9.83□□□□□ -0.84
AC048387.1-201ENST00000518428 C14orf37Q86TY3 774 aa9.82□□□□□ -0.84
AC048387.1-201ENST00000518428 POTEGQ6S5H5 508 aa9.81□□□□□ -0.84
AC048387.1-201ENST00000518428 MNX1P50219 401 aaPredicted RBP9.78□□□□□ -0.84
AC048387.1-201ENST00000518428 NUBP1P53384 320 aa9.74□□□□□ -0.85
AC048387.1-201ENST00000518428 HS6ST3Q8IZP7 471 aa9.74□□□□□ -0.85
AC048387.1-201ENST00000518428 PCDH10Q9P2E7 1040 aa9.73□□□□□ -0.85
AC048387.1-201ENST00000518428 OTUD5Q96G74 571 aa9.7□□□□□ -0.86
AC048387.1-201ENST00000518428 CIZ1Q9ULV3 898 aaPredicted RBP9.69□□□□□ -0.86
AC048387.1-201ENST00000518428 GSE1Q14687 1217 aa9.68□□□□□ -0.86
AC048387.1-201ENST00000518428 TRIM41Q8WV44 630 aa9.68□□□□□ -0.86
AC048387.1-201ENST00000518428 CHADLQ6NUI6 762 aa9.64□□□□□ -0.87
AC048387.1-201ENST00000518428 RASEFQ8IZ41 740 aa9.63□□□□□ -0.87
AC048387.1-201ENST00000518428 FAM212AQ96EL1 285 aa9.63□□□□□ -0.87
AC048387.1-201ENST00000518428 FARP1Q9Y4F1 1045 aaPredicted RBP9.61□□□□□ -0.87
AC048387.1-201ENST00000518428 NKX1-1Q15270 411 aaPredicted RBP9.6□□□□□ -0.87
AC048387.1-201ENST00000518428 DCAF8Q5TAQ9 597 aa9.6□□□□□ -0.87
AC048387.1-201ENST00000518428 DCBLD2Q96PD2 775 aa9.6□□□□□ -0.87
AC048387.1-201ENST00000518428 GTPBP6O43824 516 aaPredicted RBP9.58□□□□□ -0.88
AC048387.1-201ENST00000518428 CHRM1P11229 460 aaPredicted RBP9.56□□□□□ -0.88
AC048387.1-201ENST00000518428 RNF25Q96BH1 459 aaPredicted RBP9.56□□□□□ -0.88
AC048387.1-201ENST00000518428 POTEB2H3BUK9 544 aa9.53□□□□□ -0.88
AC048387.1-201ENST00000518428 SUPT5HO00267 1087 aaKnown RBP9.52□□□□□ -0.89
AC048387.1-201ENST00000518428 CLCN6P51797 869 aa9.52□□□□□ -0.89
AC048387.1-201ENST00000518428 PODXL2Q9NZ53 605 aa9.52□□□□□ -0.89
AC048387.1-201ENST00000518428 RANGAP1P46060 587 aaPredicted RBP9.51□□□□□ -0.89
AC048387.1-201ENST00000518428 BRPF1P55201 1214 aaPredicted RBP9.51□□□□□ -0.89
AC048387.1-201ENST00000518428 P3H3Q8IVL6 736 aa9.51□□□□□ -0.89
AC048387.1-201ENST00000518428 CD44P16070 742 aaKnown RBP9.5□□□□□ -0.89
AC048387.1-201ENST00000518428 RIOK3O14730 519 aaKnown RBP9.49□□□□□ -0.89
AC048387.1-201ENST00000518428 LMOD2Q6P5Q4 547 aa9.48□□□□□ -0.89
AC048387.1-201ENST00000518428 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.48□□□□□ -0.89
AC048387.1-201ENST00000518428 TSPYL2Q9H2G4 693 aaPredicted RBP9.47□□□□□ -0.89
AC048387.1-201ENST00000518428 PYGBP11216 843 aa9.46□□□□□ -0.9
AC048387.1-201ENST00000518428 CCDC61Q9Y6R9 512 aa9.45□□□□□ -0.9
AC048387.1-201ENST00000518428 VGFO15240 615 aaPredicted RBP9.43□□□□□ -0.9
AC048387.1-201ENST00000518428 SGIP1Q9BQI5 828 aa9.43□□□□□ -0.9
AC048387.1-201ENST00000518428 STK25O00506 426 aa9.41□□□□□ -0.9
AC048387.1-201ENST00000518428 PAK3O75914 559 aaPredicted RBP9.4□□□□□ -0.9
AC048387.1-201ENST00000518428 RYDENQ9NUL5 291 aaKnown RBP9.4□□□□□ -0.9
AC048387.1-201ENST00000518428 LCE2DQ5TA82 110 aaPredicted RBP9.38□□□□□ -0.91
AC048387.1-201ENST00000518428 ZNF467Q7Z7K2 595 aaPredicted RBP9.38□□□□□ -0.91
AC048387.1-201ENST00000518428 NEUROD2Q15784 382 aa9.37□□□□□ -0.91
AC048387.1-201ENST00000518428 KCNV2Q8TDN2 545 aa9.37□□□□□ -0.91
AC048387.1-201ENST00000518428 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.35□□□□□ -0.91
AC048387.1-201ENST00000518428 FAM163AQ96GL9 167 aaPredicted RBP9.35□□□□□ -0.91
AC048387.1-201ENST00000518428 ZFP91Q96JP5 570 aaPredicted RBP9.35□□□□□ -0.91
AC048387.1-201ENST00000518428 UBTFP17480 764 aaKnown RBP9.34□□□□□ -0.91
AC048387.1-201ENST00000518428 ZNF579Q8NAF0 562 aaKnown RBP9.34□□□□□ -0.91
AC048387.1-201ENST00000518428 KIF12Q96FN5 646 aa9.33□□□□□ -0.92
AC048387.1-201ENST00000518428 ZC3H15Q8WU90 426 aaKnown RBP9.32□□□□□ -0.92
AC048387.1-201ENST00000518428 BCL11BQ9C0K0 894 aaPredicted RBP9.32□□□□□ -0.92
AC048387.1-201ENST00000518428 PDAP1Q13442 181 aaKnown RBP9.31□□□□□ -0.92
AC048387.1-201ENST00000518428 WDR70Q9NW82 654 aa9.31□□□□□ -0.92
AC048387.1-201ENST00000518428 ZRANB1Q9UGI0 708 aa9.31□□□□□ -0.92
AC048387.1-201ENST00000518428 PCDHB8Q9UN66 801 aa9.31□□□□□ -0.92
AC048387.1-201ENST00000518428 PCDHB13Q9Y5F0 798 aa9.31□□□□□ -0.92
AC048387.1-201ENST00000518428 MAP3K13O43283 966 aa9.3□□□□□ -0.92
AC048387.1-201ENST00000518428 IFNL1Q8IU54 200 aa9.29□□□□□ -0.92
AC048387.1-201ENST00000518428 STK24Q9Y6E0 443 aa9.29□□□□□ -0.92
AC048387.1-201ENST00000518428 TRIM26Q12899 539 aaPredicted RBP9.28□□□□□ -0.92
AC048387.1-201ENST00000518428 SLC24A3Q9HC58 644 aa9.28□□□□□ -0.92
AC048387.1-201ENST00000518428 GALR2O43603 387 aaPredicted RBP9.27□□□□□ -0.93
AC048387.1-201ENST00000518428 PSEN1P49768 467 aa9.26□□□□□ -0.93
AC048387.1-201ENST00000518428 PHF12Q96QT6 1004 aa9.26□□□□□ -0.93
AC048387.1-201ENST00000518428 CADPS2Q86UW7 1296 aa9.25□□□□□ -0.93
AC048387.1-201ENST00000518428 CDAN1Q8IWY9 1227 aa9.24□□□□□ -0.93
AC048387.1-201ENST00000518428 POTEJP0CG39 1038 aa9.23□□□□□ -0.93
AC048387.1-201ENST00000518428 NPM2Q86SE8 214 aaKnown RBP9.22□□□□□ -0.93
AC048387.1-201ENST00000518428 ZMYND15Q9H091 742 aa9.22□□□□□ -0.93
AC048387.1-201ENST00000518428 PELP1Q8IZL8 1130 aaKnown RBP9.21□□□□□ -0.94
AC048387.1-201ENST00000518428 ARHGEF1Q92888 912 aaKnown RBP9.2□□□□□ -0.94
AC048387.1-201ENST00000518428 RSPH6AQ9H0K4 717 aa9.2□□□□□ -0.94
AC048387.1-201ENST00000518428 HRCP23327 699 aa9.19□□□□□ -0.94
AC048387.1-201ENST00000518428 MAMSTRQ6ZN01 415 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms