RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 PCF11O94913 1555 aaKnown RBP9.79□□□□□ -0.84
CDH12-203ENST00000517378 FHAD1B1AJZ9 1412 aa9.79□□□□□ -0.84
CDH12-203ENST00000517378 MAPKBP1O60336 1514 aa9.79□□□□□ -0.84
CDH12-203ENST00000517378 ABCA10Q8WWZ4 1543 aa9.79□□□□□ -0.84
CDH12-203ENST00000517378 CTTNBP2Q8WZ74 1663 aa9.78□□□□□ -0.84
CDH12-203ENST00000517378 FANCD2Q9BXW9 1451 aa9.78□□□□□ -0.84
CDH12-203ENST00000517378 WDR97A6NE52 1622 aa9.77□□□□□ -0.85
CDH12-203ENST00000517378 AQRO60306 1485 aaKnown RBP eCLIP9.77□□□□□ -0.85
CDH12-203ENST00000517378 FYCO1Q9BQS8 1478 aa9.76□□□□□ -0.85
CDH12-203ENST00000517378 RAB3GAP2Q9H2M9 1393 aa9.75□□□□□ -0.85
CDH12-203ENST00000517378 TOPBP1Q92547 1522 aa9.74□□□□□ -0.85
CDH12-203ENST00000517378 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.74□□□□□ -0.85
CDH12-203ENST00000517378 POLA1P09884 1462 aaPredicted RBP9.73□□□□□ -0.85
CDH12-203ENST00000517378 PHLDB1Q86UU1 1377 aa9.73□□□□□ -0.85
CDH12-203ENST00000517378 SETD5Q9C0A6 1442 aa9.73□□□□□ -0.85
CDH12-203ENST00000517378 CASKIN1Q8WXD9 1431 aa9.72□□□□□ -0.85
CDH12-203ENST00000517378 YTHDC1Q96MU7 727 aaKnown RBP9.72□□□□□ -0.85
CDH12-203ENST00000517378 SAMD9Q5K651 1589 aa9.7□□□□□ -0.86
CDH12-203ENST00000517378 LAMC3Q9Y6N6 1575 aa9.7□□□□□ -0.86
CDH12-203ENST00000517378 ABCA5Q8WWZ7 1642 aa9.7□□□□□ -0.86
CDH12-203ENST00000517378 SNAPC4Q5SXM2 1469 aa9.69□□□□□ -0.86
CDH12-203ENST00000517378 RAD54L2Q9Y4B4 1467 aa9.69□□□□□ -0.86
CDH12-203ENST00000517378 KIF21AQ7Z4S6 1674 aa9.68□□□□□ -0.86
CDH12-203ENST00000517378 THOC2Q8NI27 1593 aaKnown RBP9.68□□□□□ -0.86
CDH12-203ENST00000517378 FHOD3Q2V2M9 1422 aa9.67□□□□□ -0.86
CDH12-203ENST00000517378 FMN1Q68DA7 1419 aa9.66□□□□□ -0.86
CDH12-203ENST00000517378 LRRIQ1Q96JM4 1722 aa9.66□□□□□ -0.86
CDH12-203ENST00000517378 TIMELESSQ9UNS1 1208 aa9.65□□□□□ -0.86
CDH12-203ENST00000517378 URB2Q14146 1524 aaKnown RBP9.65□□□□□ -0.86
CDH12-203ENST00000517378 NESP48681 1621 aa9.64□□□□□ -0.87
CDH12-203ENST00000517378 FGD6Q6ZV73 1430 aa9.63□□□□□ -0.87
CDH12-203ENST00000517378 GRIN2BQ13224 1484 aa9.62□□□□□ -0.87
CDH12-203ENST00000517378 ITGAEP38570 1179 aa9.62□□□□□ -0.87
CDH12-203ENST00000517378 PTPN23Q9H3S7 1636 aa9.61□□□□□ -0.87
CDH12-203ENST00000517378 EHBP1L1Q8N3D4 1523 aa9.61□□□□□ -0.87
CDH12-203ENST00000517378 HFM1A2PYH4 1435 aa9.61□□□□□ -0.87
CDH12-203ENST00000517378 SUPT6HQ7KZ85 1726 aaKnown RBP9.6□□□□□ -0.87
CDH12-203ENST00000517378 ARHGEF11O15085 1522 aa9.6□□□□□ -0.87
CDH12-203ENST00000517378 TARBP1Q13395 1621 aaKnown RBP9.59□□□□□ -0.87
CDH12-203ENST00000517378 GAPVD1Q14C86 1478 aa9.59□□□□□ -0.87
CDH12-203ENST00000517378 FAM50AQ14320 339 aaKnown RBP9.58□□□□□ -0.88
CDH12-203ENST00000517378 CCDC18Q5T9S5 1454 aa9.58□□□□□ -0.88
CDH12-203ENST00000517378 UGGT2Q9NYU1 1516 aa9.58□□□□□ -0.88
CDH12-203ENST00000517378 MYOM3Q5VTT5 1437 aa9.57□□□□□ -0.88
CDH12-203ENST00000517378 GCC2Q8IWJ2 1684 aa9.57□□□□□ -0.88
CDH12-203ENST00000517378 UACAQ9BZF9 1416 aa9.57□□□□□ -0.88
CDH12-203ENST00000517378 MYT1Q01538 1121 aa9.57□□□□□ -0.88
CDH12-203ENST00000517378 NCOA2Q15596 1464 aa9.57□□□□□ -0.88
CDH12-203ENST00000517378 PBRM1Q86U86 1689 aa9.56□□□□□ -0.88
CDH12-203ENST00000517378 P3H3Q8IVL6 736 aa9.56□□□□□ -0.88
CDH12-203ENST00000517378 PDS5BQ9NTI5 1447 aa9.56□□□□□ -0.88
CDH12-203ENST00000517378 TCOF1Q13428 1488 aaKnown RBP9.56□□□□□ -0.88
CDH12-203ENST00000517378 PTPRKQ15262 1439 aa9.55□□□□□ -0.88
CDH12-203ENST00000517378 SUPT16HQ9Y5B9 1047 aaKnown RBP9.55□□□□□ -0.88
CDH12-203ENST00000517378 HECW1Q76N89 1606 aa9.55□□□□□ -0.88
CDH12-203ENST00000517378 MTUS2Q5JR59 1369 aa9.55□□□□□ -0.88
CDH12-203ENST00000517378 NAIPQ13075 1403 aa9.54□□□□□ -0.88
CDH12-203ENST00000517378 AKNAQ7Z591 1439 aa9.54□□□□□ -0.88
CDH12-203ENST00000517378 PPP1R15AO75807 674 aaPredicted RBP9.54□□□□□ -0.88
CDH12-203ENST00000517378 SIN3AQ96ST3 1273 aa9.54□□□□□ -0.88
CDH12-203ENST00000517378 KDM5BQ9UGL1 1544 aa9.54□□□□□ -0.88
CDH12-203ENST00000517378 MAGI3Q5TCQ9 1506 aa9.54□□□□□ -0.88
CDH12-203ENST00000517378 ADAMTS12P58397 1594 aa9.52□□□□□ -0.88
CDH12-203ENST00000517378 TDRD9Q8NDG6 1382 aaKnown RBP9.52□□□□□ -0.89
CDH12-203ENST00000517378 IQGAP2Q13576 1575 aa9.51□□□□□ -0.89
CDH12-203ENST00000517378 CCER2I3L3R5 266 aa9.5□□□□□ -0.89
CDH12-203ENST00000517378 ATP1B4Q9UN42 357 aaPredicted RBP9.5□□□□□ -0.89
CDH12-203ENST00000517378 WDR62O43379 1518 aa9.49□□□□□ -0.89
CDH12-203ENST00000517378 TONSLQ96HA7 1378 aa9.48□□□□□ -0.89
CDH12-203ENST00000517378 EPRSP07814 1512 aaKnown RBP9.48□□□□□ -0.89
CDH12-203ENST00000517378 MIA2Q96PC5 1412 aa9.48□□□□□ -0.89
CDH12-203ENST00000517378 KCNH8Q96L42 1107 aa9.47□□□□□ -0.89
CDH12-203ENST00000517378 DENND4BO75064 1496 aaPredicted RBP9.47□□□□□ -0.89
CDH12-203ENST00000517378 DDX10Q13206 875 aaKnown RBP9.46□□□□□ -0.89
CDH12-203ENST00000517378 MRC2Q9UBG0 1479 aa9.44□□□□□ -0.9
CDH12-203ENST00000517378 KDM6BO15054 1643 aa9.44□□□□□ -0.9
CDH12-203ENST00000517378 KIAA0556O60303 1618 aa9.43□□□□□ -0.9
CDH12-203ENST00000517378 DNMT1P26358 1616 aaKnown RBP9.43□□□□□ -0.9
CDH12-203ENST00000517378 CDK13Q14004 1512 aaKnown RBP9.43□□□□□ -0.9
CDH12-203ENST00000517378 ANP32CO43423 234 aa9.41□□□□□ -0.9
CDH12-203ENST00000517378 ROCK1Q13464 1354 aa9.41□□□□□ -0.9
CDH12-203ENST00000517378 POLR1AO95602 1720 aaPredicted RBP9.41□□□□□ -0.9
CDH12-203ENST00000517378 IFT140Q96RY7 1462 aa9.4□□□□□ -0.9
CDH12-203ENST00000517378 DISP1Q96F81 1524 aa9.4□□□□□ -0.91
CDH12-203ENST00000517378 TSHZ2Q9NRE2 1034 aa9.39□□□□□ -0.91
CDH12-203ENST00000517378 KIAA0586Q9BVV6 1533 aa9.39□□□□□ -0.91
CDH12-203ENST00000517378 RAPGEF6Q8TEU7 1601 aa9.39□□□□□ -0.91
CDH12-203ENST00000517378 DAPK1P53355 1430 aa9.38□□□□□ -0.91
CDH12-203ENST00000517378 ADCY10Q96PN6 1610 aa9.38□□□□□ -0.91
CDH12-203ENST00000517378 NUP153P49790 1475 aaKnown RBP9.37□□□□□ -0.91
CDH12-203ENST00000517378 ADGBQ8N7X0 1667 aa9.37□□□□□ -0.91
CDH12-203ENST00000517378 ITSN2Q9NZM3 1697 aa9.37□□□□□ -0.91
CDH12-203ENST00000517378 TEX14Q8IWB6 1497 aa9.37□□□□□ -0.91
CDH12-203ENST00000517378 CROCC2H7BZ55 1655 aa9.37□□□□□ -0.91
CDH12-203ENST00000517378 HIRIP3Q9BW71 556 aaPredicted RBP9.37□□□□□ -0.91
CDH12-203ENST00000517378 RPRD2Q5VT52 1461 aaKnown RBP9.36□□□□□ -0.91
CDH12-203ENST00000517378 EIF4G3O43432 1585 aaKnown RBP9.35□□□□□ -0.91
CDH12-203ENST00000517378 DNAJC5BQ9UF47 199 aa9.35□□□□□ -0.91
CDH12-203ENST00000517378 ABCC5O15440 1437 aa9.35□□□□□ -0.91
CDH12-203ENST00000517378 GRIN2AQ12879 1464 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms