RNA–Protein interactions for RNA: ENST00000516488.1

RNU6-875P-201, Transcript of RNA, U6 small nuclear 875, pseudogene, humanhuman

BASIC

Gene RNU6-875P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-875P-201ENST00000516488 SLC39A7Q92504 469 aa12.83□□□□□ -0.36
RNU6-875P-201ENST00000516488 MAMSTRQ6ZN01 415 aa12.82□□□□□ -0.36
RNU6-875P-201ENST00000516488 C7P10643 843 aa12.81□□□□□ -0.36
RNU6-875P-201ENST00000516488 ASTLQ6HA08 431 aaPredicted RBP12.81□□□□□ -0.36
RNU6-875P-201ENST00000516488 MS4A3Q96HJ5 214 aa12.81□□□□□ -0.36
RNU6-875P-201ENST00000516488 ATMINO43313 823 aaPredicted RBP12.79□□□□□ -0.36
RNU6-875P-201ENST00000516488 NPM1P06748 294 aaKnown RBP eCLIP12.78□□□□□ -0.36
RNU6-875P-201ENST00000516488 SCUBE2Q9NQ36 999 aa12.77□□□□□ -0.37
RNU6-875P-201ENST00000516488 MNX1P50219 401 aaPredicted RBP12.67□□□□□ -0.38
RNU6-875P-201ENST00000516488 ATN1P54259 1190 aaPredicted RBP12.66□□□□□ -0.38
RNU6-875P-201ENST00000516488 SPDYE4A6NLX3 237 aa12.65□□□□□ -0.38
RNU6-875P-201ENST00000516488 CDAN1Q8IWY9 1227 aa12.61□□□□□ -0.39
RNU6-875P-201ENST00000516488 TSPYL2Q9H2G4 693 aaPredicted RBP12.61□□□□□ -0.39
RNU6-875P-201ENST00000516488 POTEFA5A3E0 1075 aa12.55□□□□□ -0.4
RNU6-875P-201ENST00000516488 BMP2KQ9NSY1 1161 aaPredicted RBP12.52□□□□□ -0.41
RNU6-875P-201ENST00000516488 TRPC6Q9Y210 931 aa12.5□□□□□ -0.41
RNU6-875P-201ENST00000516488 CCDC61Q9Y6R9 512 aa12.49□□□□□ -0.41
RNU6-875P-201ENST00000516488 SEC24BO95487 1268 aa12.47□□□□□ -0.41
RNU6-875P-201ENST00000516488 KIF12Q96FN5 646 aa12.46□□□□□ -0.41
RNU6-875P-201ENST00000516488 COLQQ9Y215 455 aaPredicted RBP12.44□□□□□ -0.42
RNU6-875P-201ENST00000516488 TIE1P35590 1138 aa12.39□□□□□ -0.43
RNU6-875P-201ENST00000516488 MAP3K13O43283 966 aa12.38□□□□□ -0.43
RNU6-875P-201ENST00000516488 ST18O60284 1047 aa12.38□□□□□ -0.43
RNU6-875P-201ENST00000516488 SLAIN1Q8ND83 568 aa12.37□□□□□ -0.43
RNU6-875P-201ENST00000516488 TTLL13PA6NNM8 815 aa12.35□□□□□ -0.43
RNU6-875P-201ENST00000516488 MMRN1Q13201 1228 aa12.35□□□□□ -0.43
RNU6-875P-201ENST00000516488 SPNS2Q8IVW8 549 aa12.3□□□□□ -0.44
RNU6-875P-201ENST00000516488 PROM2Q8N271 834 aa12.3□□□□□ -0.44
RNU6-875P-201ENST00000516488 TRIM35Q9UPQ4 493 aa12.3□□□□□ -0.44
RNU6-875P-201ENST00000516488 IER5LQ5T953 404 aa12.25□□□□□ -0.45
RNU6-875P-201ENST00000516488 RASEFQ8IZ41 740 aa12.24□□□□□ -0.45
RNU6-875P-201ENST00000516488 PCDHB13Q9Y5F0 798 aa12.19□□□□□ -0.46
RNU6-875P-201ENST00000516488 PLEKHG5O94827 1062 aa12.18□□□□□ -0.46
RNU6-875P-201ENST00000516488 PLCG2P16885 1265 aa12.17□□□□□ -0.46
RNU6-875P-201ENST00000516488 MARVELD3Q96A59 401 aa12.17□□□□□ -0.46
RNU6-875P-201ENST00000516488 TMEM121BQ9BXQ6 578 aaPredicted RBP12.14□□□□□ -0.47
RNU6-875P-201ENST00000516488 MIER1Q8N108 512 aa12.12□□□□□ -0.47
RNU6-875P-201ENST00000516488 TMEM106CQ9BVX2 250 aa12.11□□□□□ -0.47
RNU6-875P-201ENST00000516488 SGIP1Q9BQI5 828 aa12.08□□□□□ -0.48
RNU6-875P-201ENST00000516488 IFNL1Q8IU54 200 aa12.07□□□□□ -0.48
RNU6-875P-201ENST00000516488 SNPHO15079 494 aa12.06□□□□□ -0.48
RNU6-875P-201ENST00000516488 IRX5P78411 483 aaPredicted RBP12.03□□□□□ -0.48
RNU6-875P-201ENST00000516488 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.03□□□□□ -0.48
RNU6-875P-201ENST00000516488 FKBP8Q14318 412 aa12.02□□□□□ -0.49
RNU6-875P-201ENST00000516488 EMP3P54852 163 aa12.01□□□□□ -0.49
RNU6-875P-201ENST00000516488 PLCD3Q8N3E9 789 aa12□□□□□ -0.49
RNU6-875P-201ENST00000516488 OCEL1Q9H607 264 aa11.97□□□□□ -0.49
RNU6-875P-201ENST00000516488 KRTAP3-3Q9BYR6 98 aa11.93□□□□□ -0.5
RNU6-875P-201ENST00000516488 KRTAP3-2Q9BYR7 98 aa11.93□□□□□ -0.5
RNU6-875P-201ENST00000516488 HS3ST6Q96QI5 342 aa11.92□□□□□ -0.5
RNU6-875P-201ENST00000516488 FAM205CA6NFA0 338 aa11.91□□□□□ -0.5
RNU6-875P-201ENST00000516488 ZBTB47Q9UFB7 747 aaPredicted RBP11.9□□□□□ -0.5
RNU6-875P-201ENST00000516488 NUBP1P53384 320 aa11.89□□□□□ -0.51
RNU6-875P-201ENST00000516488 FAM212AQ96EL1 285 aa11.89□□□□□ -0.51
RNU6-875P-201ENST00000516488 POTEB3A0JP26 581 aa11.87□□□□□ -0.51
RNU6-875P-201ENST00000516488 POTEBQ6S5H4 581 aa11.87□□□□□ -0.51
RNU6-875P-201ENST00000516488 C3orf67Q6ZVT6 689 aa11.87□□□□□ -0.51
RNU6-875P-201ENST00000516488 PYGBP11216 843 aa11.78□□□□□ -0.52
RNU6-875P-201ENST00000516488 FBXO3Q9UK99 471 aa11.78□□□□□ -0.52
RNU6-875P-201ENST00000516488 PCDHB8Q9UN66 801 aa11.77□□□□□ -0.53
RNU6-875P-201ENST00000516488 PDCD7Q8N8D1 485 aaKnown RBP11.76□□□□□ -0.53
RNU6-875P-201ENST00000516488 GOLGA2Q08379 1002 aa11.72□□□□□ -0.53
RNU6-875P-201ENST00000516488 RNF166Q96A37 237 aaPredicted RBP11.72□□□□□ -0.53
RNU6-875P-201ENST00000516488 DCAF8Q5TAQ9 597 aa11.71□□□□□ -0.53
RNU6-875P-201ENST00000516488 L3MBTL3Q96JM7 780 aaPredicted RBP11.71□□□□□ -0.53
RNU6-875P-201ENST00000516488 MKRN3Q13064 507 aaKnown RBP11.69□□□□□ -0.54
RNU6-875P-201ENST00000516488 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.64□□□□□ -0.55
RNU6-875P-201ENST00000516488 KLHL34Q8N239 644 aa11.63□□□□□ -0.55
RNU6-875P-201ENST00000516488 VASPP50552 380 aaPredicted RBP11.62□□□□□ -0.55
RNU6-875P-201ENST00000516488 ERBB3P21860 1342 aa11.61□□□□□ -0.55
RNU6-875P-201ENST00000516488 ZNF710Q8N1W2 664 aa11.6□□□□□ -0.55
RNU6-875P-201ENST00000516488 MYT1LQ9UL68 1186 aa11.59□□□□□ -0.55
RNU6-875P-201ENST00000516488 HOXB3P14651 431 aaPredicted RBP11.56□□□□□ -0.56
RNU6-875P-201ENST00000516488 G3V3G9 751 aa11.54□□□□□ -0.56
RNU6-875P-201ENST00000516488 HOXB1P14653 301 aaPredicted RBP11.54□□□□□ -0.56
RNU6-875P-201ENST00000516488 GSE1Q14687 1217 aa11.53□□□□□ -0.56
RNU6-875P-201ENST00000516488 DPY19L2Q6NUT2 758 aa11.53□□□□□ -0.56
RNU6-875P-201ENST00000516488 ZNF467Q7Z7K2 595 aaPredicted RBP11.53□□□□□ -0.56
RNU6-875P-201ENST00000516488 VARS2Q5ST30 1063 aaKnown RBP11.52□□□□□ -0.57
RNU6-875P-201ENST00000516488 DOK7Q18PE1 504 aa11.49□□□□□ -0.57
RNU6-875P-201ENST00000516488 PSEN1P49768 467 aa11.47□□□□□ -0.57
RNU6-875P-201ENST00000516488 BOLA1Q9Y3E2 137 aa11.47□□□□□ -0.57
RNU6-875P-201ENST00000516488 RIMBP2O15034 1052 aa11.43□□□□□ -0.58
RNU6-875P-201ENST00000516488 CHRM1P11229 460 aaPredicted RBP11.42□□□□□ -0.58
RNU6-875P-201ENST00000516488 IFNLR1Q8IU57 520 aaPredicted RBP11.41□□□□□ -0.58
RNU6-875P-201ENST00000516488 ILDR1Q86SU0 546 aaPredicted RBP11.4□□□□□ -0.58
RNU6-875P-201ENST00000516488 SPOCK2Q92563 424 aa11.4□□□□□ -0.58
RNU6-875P-201ENST00000516488 CABP2Q9NPB3 220 aa11.39□□□□□ -0.59
RNU6-875P-201ENST00000516488 PTGER2P43116 358 aa11.37□□□□□ -0.59
RNU6-875P-201ENST00000516488 ZNF687Q8N1G0 1237 aa11.37□□□□□ -0.59
RNU6-875P-201ENST00000516488 CIZ1Q9ULV3 898 aaPredicted RBP11.37□□□□□ -0.59
RNU6-875P-201ENST00000516488 ANKRD13DQ6ZTN6 518 aa11.35□□□□□ -0.59
RNU6-875P-201ENST00000516488 PDAP1Q13442 181 aaKnown RBP11.33□□□□□ -0.6
RNU6-875P-201ENST00000516488 PLA2G2EQ9NZK7 142 aa11.27□□□□□ -0.61
RNU6-875P-201ENST00000516488 ZSWIM6Q9HCJ5 1215 aa11.26□□□□□ -0.61
RNU6-875P-201ENST00000516488 GPR153Q6NV75 609 aa11.23□□□□□ -0.61
RNU6-875P-201ENST00000516488 LSM11P83369 360 aaKnown RBP eCLIP11.2□□□□□ -0.62
RNU6-875P-201ENST00000516488 TMEM92Q6UXU6 159 aa11.2□□□□□ -0.62
RNU6-875P-201ENST00000516488 ARSIQ5FYB1 569 aa11.18□□□□□ -0.62
RNU6-875P-201ENST00000516488 TRIM41Q8WV44 630 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms