RNA–Protein interactions for RNA: ENST00000516488.1

RNU6-875P-201, Transcript of RNA, U6 small nuclear 875, pseudogene, humanhuman

BASIC

Gene RNU6-875P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-875P-201ENST00000516488 AEBP2Q6ZN18 517 aaPredicted RBP26.57■■□□□ 1.84
RNU6-875P-201ENST00000516488 CHIC1Q5VXU3 224 aa24.83■■□□□ 1.57
RNU6-875P-201ENST00000516488 SENP3Q9H4L4 574 aaPredicted RBP22.77■■□□□ 1.24
RNU6-875P-201ENST00000516488 PHF23Q9BUL5 403 aaPredicted RBP22.37■■□□□ 1.17
RNU6-875P-201ENST00000516488 FOXD1Q16676 465 aa21.32■■□□□ 1
RNU6-875P-201ENST00000516488 POTEDQ86YR6 584 aa21.01■□□□□ 0.95
RNU6-875P-201ENST00000516488 MSH5O43196 834 aa20.22■□□□□ 0.83
RNU6-875P-201ENST00000516488 PIAS4Q8N2W9 510 aaPredicted RBP19.82■□□□□ 0.76
RNU6-875P-201ENST00000516488 PPP6R1Q9UPN7 881 aa19.37■□□□□ 0.69
RNU6-875P-201ENST00000516488 ADRA2BP18089 450 aa19.32■□□□□ 0.68
RNU6-875P-201ENST00000516488 PLPPR3Q6T4P5 718 aa19.26■□□□□ 0.67
RNU6-875P-201ENST00000516488 MAPK8IP2Q13387 824 aaPredicted RBP17.96■□□□□ 0.47
RNU6-875P-201ENST00000516488 DMRT2Q9Y5R5 561 aa17.92■□□□□ 0.46
RNU6-875P-201ENST00000516488 CACNB1Q02641 598 aaPredicted RBP17.88■□□□□ 0.45
RNU6-875P-201ENST00000516488 SCAF1Q9H7N4 1312 aaKnown RBP17.62■□□□□ 0.41
RNU6-875P-201ENST00000516488 DCAF8L1A6NGE4 600 aa17.41■□□□□ 0.38
RNU6-875P-201ENST00000516488 RNF39Q9H2S5 420 aa17.18■□□□□ 0.34
RNU6-875P-201ENST00000516488 HOXD11P31277 338 aaPredicted RBP16.94■□□□□ 0.3
RNU6-875P-201ENST00000516488 C1QBPQ07021 282 aaKnown RBP16.87■□□□□ 0.29
RNU6-875P-201ENST00000516488 PPP4R3CPQ6ZMV5 832 aa16.8■□□□□ 0.28
RNU6-875P-201ENST00000516488 RNF216Q9NWF9 866 aaPredicted RBP16.64■□□□□ 0.25
RNU6-875P-201ENST00000516488 CNKSR2Q8WXI2 1034 aa16.63■□□□□ 0.25
RNU6-875P-201ENST00000516488 DNAJC5BQ9UF47 199 aa16.4■□□□□ 0.22
RNU6-875P-201ENST00000516488 POTEHQ6S545 545 aa16.34■□□□□ 0.21
RNU6-875P-201ENST00000516488 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.27■□□□□ 0.2
RNU6-875P-201ENST00000516488 NCBP3Q53F19 620 aaKnown RBP15.93■□□□□ 0.14
RNU6-875P-201ENST00000516488 CAPN15O75808 1086 aa15.88■□□□□ 0.13
RNU6-875P-201ENST00000516488 DSG3P32926 999 aa15.86■□□□□ 0.13
RNU6-875P-201ENST00000516488 SPINK5Q9NQ38 1064 aaPredicted RBP15.82■□□□□ 0.12
RNU6-875P-201ENST00000516488 U3KPZ7 1027 aaPredicted RBP15.79■□□□□ 0.12
RNU6-875P-201ENST00000516488 NPM3O75607 178 aaKnown RBP15.71■□□□□ 0.11
RNU6-875P-201ENST00000516488 ABCB7O75027 752 aa15.47■□□□□ 0.07
RNU6-875P-201ENST00000516488 TRHP20396 242 aaPredicted RBP15.45■□□□□ 0.06
RNU6-875P-201ENST00000516488 ZNF219Q9P2Y4 722 aaPredicted RBP15.32■□□□□ 0.04
RNU6-875P-201ENST00000516488 APLP2Q06481 763 aa15.26■□□□□ 0.03
RNU6-875P-201ENST00000516488 SLC4A2P04920 1241 aa15.16■□□□□ 0.02
RNU6-875P-201ENST00000516488 RBM42Q9BTD8 480 aaKnown RBP15.15■□□□□ 0.02
RNU6-875P-201ENST00000516488 CHRDL2Q6WN34 429 aa15.14■□□□□ 0.01
RNU6-875P-201ENST00000516488 KCNA4P22459 653 aa15.08■□□□□ 0
RNU6-875P-201ENST00000516488 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.06■□□□□ 0
RNU6-875P-201ENST00000516488 HNRNPUL2Q1KMD3 747 aaKnown RBP15.06■□□□□ 0
RNU6-875P-201ENST00000516488 SP7Q8TDD2 431 aaPredicted RBP14.97□□□□□ -0.01
RNU6-875P-201ENST00000516488 SAMD1Q6SPF0 538 aaPredicted RBP14.96□□□□□ -0.01
RNU6-875P-201ENST00000516488 POLA2Q14181 598 aa14.81□□□□□ -0.04
RNU6-875P-201ENST00000516488 AKT1S1Q96B36 256 aa14.63□□□□□ -0.07
RNU6-875P-201ENST00000516488 PIP4P2Q8N4L2 257 aa14.62□□□□□ -0.07
RNU6-875P-201ENST00000516488 HAX1O00165 279 aa14.6□□□□□ -0.07
RNU6-875P-201ENST00000516488 MYCNP04198 464 aaPredicted RBP14.54□□□□□ -0.08
RNU6-875P-201ENST00000516488 REM2Q8IYK8 340 aaPredicted RBP14.52□□□□□ -0.09
RNU6-875P-201ENST00000516488 OSCARQ8IYS5 282 aa14.42□□□□□ -0.1
RNU6-875P-201ENST00000516488 PITPNM1O00562 1244 aa14.41□□□□□ -0.1
RNU6-875P-201ENST00000516488 ZBTB12Q9Y330 459 aaPredicted RBP14.41□□□□□ -0.1
RNU6-875P-201ENST00000516488 FXR2P51116 673 aaKnown RBP eCLIP14.36□□□□□ -0.11
RNU6-875P-201ENST00000516488 EVX2Q03828 476 aa14.32□□□□□ -0.12
RNU6-875P-201ENST00000516488 ATF5Q9Y2D1 282 aaPredicted RBP14.3□□□□□ -0.12
RNU6-875P-201ENST00000516488 SLC4A1APQ9BWU0 796 aaKnown RBP14.25□□□□□ -0.13
RNU6-875P-201ENST00000516488 FOXD4L1Q9NU39 408 aa14.08□□□□□ -0.16
RNU6-875P-201ENST00000516488 PRKAR2AP13861 404 aaKnown RBP14.05□□□□□ -0.16
RNU6-875P-201ENST00000516488 LHX8Q68G74 356 aa14.04□□□□□ -0.16
RNU6-875P-201ENST00000516488 CLEC11AQ9Y240 323 aa13.98□□□□□ -0.17
RNU6-875P-201ENST00000516488 GABBR2O75899 941 aa13.95□□□□□ -0.18
RNU6-875P-201ENST00000516488 C19orf67A6NJJ6 358 aa13.94□□□□□ -0.18
RNU6-875P-201ENST00000516488 SPDYE2BA6NHP3 402 aa13.9□□□□□ -0.18
RNU6-875P-201ENST00000516488 SPDYE6P0CI01 402 aa13.9□□□□□ -0.18
RNU6-875P-201ENST00000516488 SPDYE2Q495Y8 402 aa13.9□□□□□ -0.18
RNU6-875P-201ENST00000516488 PLSCR2Q9NRY7 297 aa13.88□□□□□ -0.19
RNU6-875P-201ENST00000516488 SPDYE1Q8NFV5 336 aaPredicted RBP13.86□□□□□ -0.19
RNU6-875P-201ENST00000516488 ZBTB22O15209 634 aa13.84□□□□□ -0.19
RNU6-875P-201ENST00000516488 FBLN2P98095 1184 aa13.79□□□□□ -0.2
RNU6-875P-201ENST00000516488 CHADLQ6NUI6 762 aa13.77□□□□□ -0.21
RNU6-875P-201ENST00000516488 ZNF692Q9BU19 519 aaPredicted RBP13.68□□□□□ -0.22
RNU6-875P-201ENST00000516488 ATXN8OSP0DMR3 200 aa13.65□□□□□ -0.22
RNU6-875P-201ENST00000516488 POTEIP0CG38 1075 aa13.62□□□□□ -0.23
RNU6-875P-201ENST00000516488 SSUH2Q9Y2M2 353 aa13.61□□□□□ -0.23
RNU6-875P-201ENST00000516488 PRR29P0C7W0 189 aa13.58□□□□□ -0.24
RNU6-875P-201ENST00000516488 CD44P16070 742 aaKnown RBP13.57□□□□□ -0.24
RNU6-875P-201ENST00000516488 MKRN4PQ13434 485 aaPredicted RBP13.56□□□□□ -0.24
RNU6-875P-201ENST00000516488 DCBLD2Q96PD2 775 aa13.48□□□□□ -0.25
RNU6-875P-201ENST00000516488 PABPN1Q86U42 306 aaKnown RBP eCLIP13.45□□□□□ -0.26
RNU6-875P-201ENST00000516488 FARP1Q9Y4F1 1045 aaPredicted RBP13.41□□□□□ -0.26
RNU6-875P-201ENST00000516488 CLCN6P51797 869 aa13.37□□□□□ -0.27
RNU6-875P-201ENST00000516488 POTEMA6NI47 508 aa13.29□□□□□ -0.28
RNU6-875P-201ENST00000516488 OTUD5Q96G74 571 aa13.28□□□□□ -0.28
RNU6-875P-201ENST00000516488 ZRANB1Q9UGI0 708 aa13.27□□□□□ -0.29
RNU6-875P-201ENST00000516488 ZNF579Q8NAF0 562 aaKnown RBP13.25□□□□□ -0.29
RNU6-875P-201ENST00000516488 POTEGQ6S5H5 508 aa13.22□□□□□ -0.29
RNU6-875P-201ENST00000516488 CSRNP3Q8WYN3 585 aa13.22□□□□□ -0.29
RNU6-875P-201ENST00000516488 GALR2O43603 387 aaPredicted RBP13.2□□□□□ -0.3
RNU6-875P-201ENST00000516488 POTEB2H3BUK9 544 aa13.18□□□□□ -0.3
RNU6-875P-201ENST00000516488 EHMT2Q96KQ7 1210 aa13.06□□□□□ -0.32
RNU6-875P-201ENST00000516488 PHF12Q96QT6 1004 aa13.03□□□□□ -0.32
RNU6-875P-201ENST00000516488 CREBZFQ9NS37 354 aa13.03□□□□□ -0.32
RNU6-875P-201ENST00000516488 PAK3O75914 559 aaPredicted RBP13□□□□□ -0.33
RNU6-875P-201ENST00000516488 PELP1Q8IZL8 1130 aaKnown RBP12.98□□□□□ -0.33
RNU6-875P-201ENST00000516488 PCDH10Q9P2E7 1040 aa12.98□□□□□ -0.33
RNU6-875P-201ENST00000516488 METRNQ9UJH8 293 aa12.93□□□□□ -0.34
RNU6-875P-201ENST00000516488 FAM163AQ96GL9 167 aaPredicted RBP12.87□□□□□ -0.35
RNU6-875P-201ENST00000516488 POTEJP0CG39 1038 aa12.86□□□□□ -0.35
RNU6-875P-201ENST00000516488 STAG3Q9UJ98 1225 aa12.86□□□□□ -0.35
RNU6-875P-201ENST00000516488 LCE2DQ5TA82 110 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms