RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 FAM212AQ96EL1 285 aa7.76□□□□□ -1.17
RNU6-390P-201ENST00000516259 SGIP1Q9BQI5 828 aa7.75□□□□□ -1.17
RNU6-390P-201ENST00000516259 CLEC11AQ9Y240 323 aa7.75□□□□□ -1.17
RNU6-390P-201ENST00000516259 CHGAP10645 457 aaKnown RBP7.74□□□□□ -1.17
RNU6-390P-201ENST00000516259 PAXIP1Q6ZW49 1069 aaPredicted RBP7.74□□□□□ -1.17
RNU6-390P-201ENST00000516259 RIOK3O14730 519 aaKnown RBP7.73□□□□□ -1.17
RNU6-390P-201ENST00000516259 DCAF8Q5TAQ9 597 aa7.73□□□□□ -1.17
RNU6-390P-201ENST00000516259 RNF25Q96BH1 459 aaPredicted RBP7.72□□□□□ -1.17
RNU6-390P-201ENST00000516259 BCANQ96GW7 911 aa7.72□□□□□ -1.17
RNU6-390P-201ENST00000516259 PITPNM1O00562 1244 aa7.71□□□□□ -1.18
RNU6-390P-201ENST00000516259 VGFO15240 615 aaPredicted RBP7.7□□□□□ -1.18
RNU6-390P-201ENST00000516259 CFAP44Q96MT7 982 aa7.69□□□□□ -1.18
RNU6-390P-201ENST00000516259 RASEFQ8IZ41 740 aa7.67□□□□□ -1.18
RNU6-390P-201ENST00000516259 RYDENQ9NUL5 291 aaKnown RBP7.66□□□□□ -1.18
RNU6-390P-201ENST00000516259 KDM2AQ9Y2K7 1162 aa7.66□□□□□ -1.18
RNU6-390P-201ENST00000516259 TSHZ2Q9NRE2 1034 aa7.61□□□□□ -1.19
RNU6-390P-201ENST00000516259 GTPBP6O43824 516 aaPredicted RBP7.6□□□□□ -1.19
RNU6-390P-201ENST00000516259 STK25O00506 426 aa7.59□□□□□ -1.19
RNU6-390P-201ENST00000516259 NKX1-1Q15270 411 aaPredicted RBP7.59□□□□□ -1.19
RNU6-390P-201ENST00000516259 ZNF467Q7Z7K2 595 aaPredicted RBP7.59□□□□□ -1.19
RNU6-390P-201ENST00000516259 FARP1Q9Y4F1 1045 aaPredicted RBP7.59□□□□□ -1.19
RNU6-390P-201ENST00000516259 FXR2P51116 673 aaKnown RBP eCLIP7.58□□□□□ -1.2
RNU6-390P-201ENST00000516259 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.56□□□□□ -1.2
RNU6-390P-201ENST00000516259 ZFP91Q96JP5 570 aaPredicted RBP7.56□□□□□ -1.2
RNU6-390P-201ENST00000516259 PYGBP11216 843 aa7.55□□□□□ -1.2
RNU6-390P-201ENST00000516259 BCL11BQ9C0K0 894 aaPredicted RBP7.54□□□□□ -1.2
RNU6-390P-201ENST00000516259 PDAP1Q13442 181 aaKnown RBP7.52□□□□□ -1.21
RNU6-390P-201ENST00000516259 ZNF579Q8NAF0 562 aaKnown RBP7.52□□□□□ -1.21
RNU6-390P-201ENST00000516259 STK24Q9Y6E0 443 aa7.52□□□□□ -1.21
RNU6-390P-201ENST00000516259 CCDC61Q9Y6R9 512 aa7.52□□□□□ -1.21
RNU6-390P-201ENST00000516259 PRKAR2AP13861 404 aaKnown RBP7.51□□□□□ -1.21
RNU6-390P-201ENST00000516259 CHADLQ6NUI6 762 aa7.51□□□□□ -1.21
RNU6-390P-201ENST00000516259 PAK3O75914 559 aaPredicted RBP7.48□□□□□ -1.21
RNU6-390P-201ENST00000516259 TSPYL2Q9H2G4 693 aaPredicted RBP7.48□□□□□ -1.21
RNU6-390P-201ENST00000516259 CHRDL2Q6WN34 429 aa7.46□□□□□ -1.22
RNU6-390P-201ENST00000516259 PSEN1P49768 467 aa7.43□□□□□ -1.22
RNU6-390P-201ENST00000516259 NBR1Q14596 966 aa7.43□□□□□ -1.22
RNU6-390P-201ENST00000516259 PIP4P2Q8N4L2 257 aa7.43□□□□□ -1.22
RNU6-390P-201ENST00000516259 KIF12Q96FN5 646 aa7.42□□□□□ -1.22
RNU6-390P-201ENST00000516259 SOX12O15370 315 aa7.41□□□□□ -1.22
RNU6-390P-201ENST00000516259 P3H3Q8IVL6 736 aa7.41□□□□□ -1.22
RNU6-390P-201ENST00000516259 PCDHB8Q9UN66 801 aa7.41□□□□□ -1.22
RNU6-390P-201ENST00000516259 PCDHB13Q9Y5F0 798 aa7.41□□□□□ -1.22
RNU6-390P-201ENST00000516259 IFNL1Q8IU54 200 aa7.38□□□□□ -1.23
RNU6-390P-201ENST00000516259 MFRPQ9BY79 579 aa7.38□□□□□ -1.23
RNU6-390P-201ENST00000516259 MAP3K13O43283 966 aa7.37□□□□□ -1.23
RNU6-390P-201ENST00000516259 NLRP6P59044 892 aa7.37□□□□□ -1.23
RNU6-390P-201ENST00000516259 TPRNQ4KMQ1 711 aa7.35□□□□□ -1.23
RNU6-390P-201ENST00000516259 FBXO22Q8NEZ5 403 aa7.35□□□□□ -1.23
RNU6-390P-201ENST00000516259 PRKCSHP14314 528 aaPredicted RBP7.33□□□□□ -1.24
RNU6-390P-201ENST00000516259 CD44P16070 742 aaKnown RBP7.32□□□□□ -1.24
RNU6-390P-201ENST00000516259 CLCN6P51797 869 aa7.32□□□□□ -1.24
RNU6-390P-201ENST00000516259 WDR70Q9NW82 654 aa7.32□□□□□ -1.24
RNU6-390P-201ENST00000516259 ZRANB1Q9UGI0 708 aa7.32□□□□□ -1.24
RNU6-390P-201ENST00000516259 EFCAB3Q8N7B9 438 aa7.31□□□□□ -1.24
RNU6-390P-201ENST00000516259 C19orf67A6NJJ6 358 aa7.29□□□□□ -1.24
RNU6-390P-201ENST00000516259 CADPS2Q86UW7 1296 aa7.29□□□□□ -1.24
RNU6-390P-201ENST00000516259 CABP2Q9NPB3 220 aa7.29□□□□□ -1.24
RNU6-390P-201ENST00000516259 ILDR1Q86SU0 546 aaPredicted RBP7.27□□□□□ -1.25
RNU6-390P-201ENST00000516259 ARHGEF1Q92888 912 aaKnown RBP7.27□□□□□ -1.25
RNU6-390P-201ENST00000516259 TIE1P35590 1138 aa7.26□□□□□ -1.25
RNU6-390P-201ENST00000516259 PHF8Q9UPP1 1060 aa7.26□□□□□ -1.25
RNU6-390P-201ENST00000516259 PPP1R37O75864 691 aa7.25□□□□□ -1.25
RNU6-390P-201ENST00000516259 KCNV2Q8TDN2 545 aa7.25□□□□□ -1.25
RNU6-390P-201ENST00000516259 ARIH1Q9Y4X5 557 aaPredicted RBP7.25□□□□□ -1.25
RNU6-390P-201ENST00000516259 PHF12Q96QT6 1004 aa7.24□□□□□ -1.25
RNU6-390P-201ENST00000516259 PDE4AP27815 886 aa7.23□□□□□ -1.25
RNU6-390P-201ENST00000516259 MFSD10Q14728 455 aa7.23□□□□□ -1.25
RNU6-390P-201ENST00000516259 E2F4Q16254 413 aa7.23□□□□□ -1.25
RNU6-390P-201ENST00000516259 TMEM106CQ9BVX2 250 aa7.23□□□□□ -1.25
RNU6-390P-201ENST00000516259 GOLGA2Q08379 1002 aa7.22□□□□□ -1.25
RNU6-390P-201ENST00000516259 MS4A4AQ96JQ5 239 aa7.22□□□□□ -1.25
RNU6-390P-201ENST00000516259 MS4A3Q96HJ5 214 aa7.21□□□□□ -1.26
RNU6-390P-201ENST00000516259 CRISPLD2Q9H0B8 497 aa7.21□□□□□ -1.26
RNU6-390P-201ENST00000516259 TULP1O00294 542 aaPredicted RBP7.2□□□□□ -1.26
RNU6-390P-201ENST00000516259 MKRN3Q13064 507 aaKnown RBP7.2□□□□□ -1.26
RNU6-390P-201ENST00000516259 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.19□□□□□ -1.26
RNU6-390P-201ENST00000516259 NCKAP5LQ9HCH0 1330 aa7.19□□□□□ -1.26
RNU6-390P-201ENST00000516259 TTLL13PA6NNM8 815 aa7.18□□□□□ -1.26
RNU6-390P-201ENST00000516259 CAMK2BQ13554 666 aa7.18□□□□□ -1.26
RNU6-390P-201ENST00000516259 TESPA1A2RU30 521 aaPredicted RBP7.15□□□□□ -1.26
RNU6-390P-201ENST00000516259 DDX27Q96GQ7 796 aaKnown RBP7.15□□□□□ -1.26
RNU6-390P-201ENST00000516259 LMOD2Q6P5Q4 547 aa7.14□□□□□ -1.27
RNU6-390P-201ENST00000516259 LARP6Q9BRS8 491 aaKnown RBP7.14□□□□□ -1.27
RNU6-390P-201ENST00000516259 BMP2KQ9NSY1 1161 aaPredicted RBP7.14□□□□□ -1.27
RNU6-390P-201ENST00000516259 TRPC6Q9Y210 931 aa7.14□□□□□ -1.27
RNU6-390P-201ENST00000516259 IER5LQ5T953 404 aa7.13□□□□□ -1.27
RNU6-390P-201ENST00000516259 SMYD5Q6GMV2 418 aa7.13□□□□□ -1.27
RNU6-390P-201ENST00000516259 GPHNQ9NQX3 736 aaPredicted RBP7.13□□□□□ -1.27
RNU6-390P-201ENST00000516259 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.12□□□□□ -1.27
RNU6-390P-201ENST00000516259 TRIM35Q9UPQ4 493 aa7.1□□□□□ -1.27
RNU6-390P-201ENST00000516259 ASTLQ6HA08 431 aaPredicted RBP7.09□□□□□ -1.27
RNU6-390P-201ENST00000516259 TMEM121BQ9BXQ6 578 aaPredicted RBP7.09□□□□□ -1.27
RNU6-390P-201ENST00000516259 GALR2O43603 387 aaPredicted RBP7.08□□□□□ -1.28
RNU6-390P-201ENST00000516259 SEMA3EO15041 775 aa7.07□□□□□ -1.28
RNU6-390P-201ENST00000516259 IRX5P78411 483 aaPredicted RBP7.07□□□□□ -1.28
RNU6-390P-201ENST00000516259 PDCD7Q8N8D1 485 aaKnown RBP7.07□□□□□ -1.28
RNU6-390P-201ENST00000516259 OCEL1Q9H607 264 aa7.07□□□□□ -1.28
RNU6-390P-201ENST00000516259 SPDYE16A6NNV3 312 aaPredicted RBP7.06□□□□□ -1.28
RNU6-390P-201ENST00000516259 FOXK1P85037 733 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms