RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 TSHZ2Q9NRE2 1034 aa14.05□□□□□ -0.16
SMG7-215ENST00000515829 ZNF777Q9ULD5 760 aaPredicted RBP14.05□□□□□ -0.16
SMG7-215ENST00000515829 SENP3-EIF4A1A0A087X0R7 540 aa14.05□□□□□ -0.16
SMG7-215ENST00000515829 RAB3GAP2Q9H2M9 1393 aa14.05□□□□□ -0.16
SMG7-215ENST00000515829 MRS2Q9HD23 443 aa14.04□□□□□ -0.16
SMG7-215ENST00000515829 FBLN2P98095 1184 aa14□□□□□ -0.17
SMG7-215ENST00000515829 SETD5Q9C0A6 1442 aa13.99□□□□□ -0.17
SMG7-215ENST00000515829 SALL2Q9Y467 1007 aaPredicted RBP13.99□□□□□ -0.17
SMG7-215ENST00000515829 EIF4G2P78344 907 aaKnown RBP eCLIP13.98□□□□□ -0.175e-7■■□□□ 11.4
SMG7-215ENST00000515829 CUX2O14529 1486 aa13.98□□□□□ -0.17
SMG7-215ENST00000515829 NPM2Q86SE8 214 aaKnown RBP13.98□□□□□ -0.17
SMG7-215ENST00000515829 CARMIL1Q5VZK9 1371 aa13.97□□□□□ -0.17
SMG7-215ENST00000515829 RBM19Q9Y4C8 960 aaKnown RBP13.95□□□□□ -0.18
SMG7-215ENST00000515829 NBR1Q14596 966 aa13.95□□□□□ -0.18
SMG7-215ENST00000515829 ANP32AP39687 249 aaKnown RBP13.94□□□□□ -0.18
SMG7-215ENST00000515829 ATAD2BQ9ULI0 1458 aa13.93□□□□□ -0.18
SMG7-215ENST00000515829 CCDC136Q96JN2 1154 aa13.92□□□□□ -0.18
SMG7-215ENST00000515829 KIF21BO75037 1637 aa13.91□□□□□ -0.18
SMG7-215ENST00000515829 PPP1R15AO75807 674 aaPredicted RBP13.9□□□□□ -0.18
SMG7-215ENST00000515829 CCER2I3L3R5 266 aa13.89□□□□□ -0.19
SMG7-215ENST00000515829 SLC4A1APQ9BWU0 796 aaKnown RBP13.89□□□□□ -0.19
SMG7-215ENST00000515829 TMC1Q8TDI8 760 aa13.89□□□□□ -0.19
SMG7-215ENST00000515829 KDM2AQ9Y2K7 1162 aa13.88□□□□□ -0.19
SMG7-215ENST00000515829 FHAD1B1AJZ9 1412 aa13.88□□□□□ -0.19
SMG7-215ENST00000515829 B4GALNT3Q6L9W6 998 aa13.87□□□□□ -0.19
SMG7-215ENST00000515829 TIMELESSQ9UNS1 1208 aa13.87□□□□□ -0.19
SMG7-215ENST00000515829 SYNJ1O43426 1573 aa13.86□□□□□ -0.19
SMG7-215ENST00000515829 FOXD1Q16676 465 aa13.85□□□□□ -0.19
SMG7-215ENST00000515829 HSPA5P11021 654 aaKnown RBP13.84□□□□□ -0.19
SMG7-215ENST00000515829 ARHGAP35Q9NRY4 1499 aa13.83□□□□□ -0.2
SMG7-215ENST00000515829 PPP4R2Q9NY27 417 aa13.81□□□□□ -0.2
SMG7-215ENST00000515829 FHOD3Q2V2M9 1422 aa13.81□□□□□ -0.2
SMG7-215ENST00000515829 ZBTB47Q9UFB7 747 aaPredicted RBP13.8□□□□□ -0.2
SMG7-215ENST00000515829 ARAP1Q96P48 1450 aa13.79□□□□□ -0.2
SMG7-215ENST00000515829 BCL11AQ9H165 835 aa13.78□□□□□ -0.2
SMG7-215ENST00000515829 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.75□□□□□ -0.214e-9■■□□□ 11.6
SMG7-215ENST00000515829 PHLDB1Q86UU1 1377 aa13.74□□□□□ -0.21
SMG7-215ENST00000515829 IGF1RP08069 1367 aa13.72□□□□□ -0.21
SMG7-215ENST00000515829 RRBP1Q9P2E9 1410 aaKnown RBP13.71□□□□□ -0.22
SMG7-215ENST00000515829 L3MBTL2Q969R5 705 aa13.7□□□□□ -0.22
SMG7-215ENST00000515829 TDRD9Q8NDG6 1382 aaKnown RBP13.7□□□□□ -0.22
SMG7-215ENST00000515829 MPHOSPH9Q99550 1183 aa13.7□□□□□ -0.22
SMG7-215ENST00000515829 TSPY4P0CV99 314 aa13.7□□□□□ -0.22
SMG7-215ENST00000515829 TSPY10P0CW01 314 aa13.7□□□□□ -0.22
SMG7-215ENST00000515829 RGL3Q3MIN7 710 aa13.7□□□□□ -0.22
SMG7-215ENST00000515829 CFDP1Q9UEE9 299 aaPredicted RBP13.7□□□□□ -0.22
SMG7-215ENST00000515829 EIF4G1Q04637 1599 aaKnown RBP13.69□□□□□ -0.22
SMG7-215ENST00000515829 CARD11Q9BXL7 1154 aa13.69□□□□□ -0.22
SMG7-215ENST00000515829 CANXP27824 592 aaKnown RBP13.68□□□□□ -0.22
SMG7-215ENST00000515829 PRXQ9BXM0 1461 aa13.67□□□□□ -0.22
SMG7-215ENST00000515829 NOP58Q9Y2X3 529 aaKnown RBP13.66□□□□□ -0.22
SMG7-215ENST00000515829 CADPSQ9ULU8 1353 aa13.66□□□□□ -0.22
SMG7-215ENST00000515829 FMN1Q68DA7 1419 aa13.65□□□□□ -0.22
SMG7-215ENST00000515829 CHMP7Q8WUX9 453 aaPredicted RBP13.64□□□□□ -0.23
SMG7-215ENST00000515829 LRRC9Q6ZRR7 1453 aa13.63□□□□□ -0.23
SMG7-215ENST00000515829 ERICH3Q5RHP9 1530 aa13.62□□□□□ -0.23
SMG7-215ENST00000515829 CCDC18Q5T9S5 1454 aa13.62□□□□□ -0.23
SMG7-215ENST00000515829 LAS1LQ9Y4W2 734 aaKnown RBP13.61□□□□□ -0.23
SMG7-215ENST00000515829 DEKP35659 375 aaKnown RBP13.61□□□□□ -0.23
SMG7-215ENST00000515829 TOP2BQ02880 1626 aa13.6□□□□□ -0.23
SMG7-215ENST00000515829 NEFMP07197 916 aa13.59□□□□□ -0.23
SMG7-215ENST00000515829 PRKRIP1Q9H875 184 aaPredicted RBP13.59□□□□□ -0.23
SMG7-215ENST00000515829 FGD5Q6ZNL6 1462 aa13.59□□□□□ -0.23
SMG7-215ENST00000515829 WDR97A6NE52 1622 aa13.59□□□□□ -0.23
SMG7-215ENST00000515829 DCAF11Q8TEB1 546 aa13.58□□□□□ -0.23
SMG7-215ENST00000515829 PKD2Q13563 968 aa13.58□□□□□ -0.24
SMG7-215ENST00000515829 WDR43Q15061 677 aaKnown RBP eCLIP13.58□□□□□ -0.24
SMG7-215ENST00000515829 PLEKHD1A6NEE1 506 aa13.58□□□□□ -0.24
SMG7-215ENST00000515829 CC2D1BQ5T0F9 858 aaKnown RBP13.57□□□□□ -0.24
SMG7-215ENST00000515829 ERICH6BQ5W0A0 696 aa13.56□□□□□ -0.24
SMG7-215ENST00000515829 CUX1P39880 1505 aa13.56□□□□□ -0.24
SMG7-215ENST00000515829 RAD54L2Q9Y4B4 1467 aa13.56□□□□□ -0.24
SMG7-215ENST00000515829 FGD6Q6ZV73 1430 aa13.55□□□□□ -0.24
SMG7-215ENST00000515829 WASHC2AQ641Q2 1341 aa13.55□□□□□ -0.24
SMG7-215ENST00000515829 RTN4Q9NQC3 1192 aaKnown RBP13.54□□□□□ -0.24
SMG7-215ENST00000515829 EIF5BO60841 1220 aaKnown RBP13.53□□□□□ -0.24
SMG7-215ENST00000515829 CHGAP10645 457 aaKnown RBP13.52□□□□□ -0.24
SMG7-215ENST00000515829 NUDCQ9Y266 331 aa13.51□□□□□ -0.25
SMG7-215ENST00000515829 NCAPD3P42695 1498 aa13.51□□□□□ -0.25
SMG7-215ENST00000515829 FANCD2Q9BXW9 1451 aa13.51□□□□□ -0.25
SMG7-215ENST00000515829 CCDC184Q52MB2 194 aa13.51□□□□□ -0.25
SMG7-215ENST00000515829 UACAQ9BZF9 1416 aa13.5□□□□□ -0.25
SMG7-215ENST00000515829 ARXQ96QS3 562 aa13.5□□□□□ -0.25
SMG7-215ENST00000515829 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.5□□□□□ -0.25
SMG7-215ENST00000515829 TIAM1Q13009 1591 aa13.49□□□□□ -0.25
SMG7-215ENST00000515829 BICRAQ9NZM4 1560 aa13.48□□□□□ -0.25
SMG7-215ENST00000515829 CFTRP13569 1480 aa13.48□□□□□ -0.25
SMG7-215ENST00000515829 ZBED9Q6R2W3 1325 aa13.48□□□□□ -0.25
SMG7-215ENST00000515829 RGS3P49796 1198 aa13.48□□□□□ -0.25
SMG7-215ENST00000515829 FANCIQ9NVI1 1328 aa13.48□□□□□ -0.25
SMG7-215ENST00000515829 RCAN3Q9UKA8 241 aa13.46□□□□□ -0.25
SMG7-215ENST00000515829 ZNF644Q9H582 1327 aaPredicted RBP13.46□□□□□ -0.26
SMG7-215ENST00000515829 KNSTRNQ9Y448 316 aa13.46□□□□□ -0.26
SMG7-215ENST00000515829 MYOM3Q5VTT5 1437 aa13.45□□□□□ -0.26
SMG7-215ENST00000515829 KIF7Q2M1P5 1343 aa13.45□□□□□ -0.26
SMG7-215ENST00000515829 CASKIN1Q8WXD9 1431 aa13.45□□□□□ -0.26
SMG7-215ENST00000515829 NUP155O75694 1391 aa13.45□□□□□ -0.26
SMG7-215ENST00000515829 SENP3Q9H4L4 574 aaPredicted RBP13.45□□□□□ -0.26
SMG7-215ENST00000515829 CCDC7Q96M83 1385 aa13.44□□□□□ -0.26
SMG7-215ENST00000515829 NPM1P06748 294 aaKnown RBP eCLIP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms