RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 SOGA1O94964 1423 aa16.96■□□□□ 0.3
TRIO-220ENST00000512979 FGD5Q6ZNL6 1462 aa16.93■□□□□ 0.3
TRIO-220ENST00000512979 CUX1P39880 1505 aa16.91■□□□□ 0.3
TRIO-220ENST00000512979 TDRD9Q8NDG6 1382 aaKnown RBP16.91■□□□□ 0.3
TRIO-220ENST00000512979 FBLN2P98095 1184 aa16.89■□□□□ 0.29
TRIO-220ENST00000512979 RIMBP3CA6NJZ7 1639 aa16.88■□□□□ 0.29
TRIO-220ENST00000512979 RIMBP3BA6NNM3 1639 aa16.88■□□□□ 0.29
TRIO-220ENST00000512979 RIMBP3Q9UFD9 1639 aa16.88■□□□□ 0.29
TRIO-220ENST00000512979 APLP2Q06481 763 aa16.87■□□□□ 0.29
TRIO-220ENST00000512979 ARHGEF11O15085 1522 aa16.86■□□□□ 0.29
TRIO-220ENST00000512979 CHD1O14646 1710 aa16.85■□□□□ 0.29
TRIO-220ENST00000512979 WDR97A6NE52 1622 aa16.83■□□□□ 0.28
TRIO-220ENST00000512979 SNAPC4Q5SXM2 1469 aa16.83■□□□□ 0.28
TRIO-220ENST00000512979 GRIN2BQ13224 1484 aa16.79■□□□□ 0.28
TRIO-220ENST00000512979 CHMP7Q8WUX9 453 aaPredicted RBP16.78■□□□□ 0.28
TRIO-220ENST00000512979 MAGI1Q96QZ7 1491 aaPredicted RBP16.77■□□□□ 0.28
TRIO-220ENST00000512979 SPDYE4A6NLX3 237 aa16.76■□□□□ 0.27
TRIO-220ENST00000512979 CYB5RLQ6IPT4 315 aa16.76■□□□□ 0.27
TRIO-220ENST00000512979 GAPVD1Q14C86 1478 aa16.74■□□□□ 0.27
TRIO-220ENST00000512979 FBXO3Q9UK99 471 aa16.74■□□□□ 0.27
TRIO-220ENST00000512979 ABCA10Q8WWZ4 1543 aa16.73■□□□□ 0.27
TRIO-220ENST00000512979 SYNJ2O15056 1496 aa16.72■□□□□ 0.27
TRIO-220ENST00000512979 MKRN4PQ13434 485 aaPredicted RBP16.71■□□□□ 0.27
TRIO-220ENST00000512979 ARAP1Q96P48 1450 aa16.71■□□□□ 0.27
TRIO-220ENST00000512979 SYNJ1O43426 1573 aa16.7■□□□□ 0.26
TRIO-220ENST00000512979 WRNQ14191 1432 aaPredicted RBP eCLIP16.7■□□□□ 0.26
TRIO-220ENST00000512979 CLASP1Q7Z460 1538 aa16.69■□□□□ 0.26
TRIO-220ENST00000512979 PBRM1Q86U86 1689 aa16.69■□□□□ 0.26
TRIO-220ENST00000512979 ABCA5Q8WWZ7 1642 aa16.68■□□□□ 0.26
TRIO-220ENST00000512979 TOP2BQ02880 1626 aa16.65■□□□□ 0.26
TRIO-220ENST00000512979 BIVM-ERCC5R4GMW8 1640 aa16.64■□□□□ 0.25
TRIO-220ENST00000512979 PROM2Q8N271 834 aa16.59■□□□□ 0.25
TRIO-220ENST00000512979 ADAMTS12P58397 1594 aa16.56■□□□□ 0.24
TRIO-220ENST00000512979 GRIN2AQ12879 1464 aa16.56■□□□□ 0.24
TRIO-220ENST00000512979 TRHP20396 242 aaPredicted RBP16.55■□□□□ 0.24
TRIO-220ENST00000512979 FHAD1B1AJZ9 1412 aa16.53■□□□□ 0.24
TRIO-220ENST00000512979 VASPP50552 380 aaPredicted RBP16.53■□□□□ 0.24
TRIO-220ENST00000512979 SPINK5Q9NQ38 1064 aaPredicted RBP16.53■□□□□ 0.24
TRIO-220ENST00000512979 NUP160Q12769 1436 aa16.52■□□□□ 0.23
TRIO-220ENST00000512979 ERICH3Q5RHP9 1530 aa16.51■□□□□ 0.23
TRIO-220ENST00000512979 POLA2Q14181 598 aa16.49■□□□□ 0.23
TRIO-220ENST00000512979 CEP170Q5SW79 1584 aa16.49■□□□□ 0.23
TRIO-220ENST00000512979 ERCC6L2Q5T890 1561 aa16.45■□□□□ 0.22
TRIO-220ENST00000512979 CAPN15O75808 1086 aa16.4■□□□□ 0.22
TRIO-220ENST00000512979 SHROOM2Q13796 1616 aa16.39■□□□□ 0.21
TRIO-220ENST00000512979 IFNLR1Q8IU57 520 aaPredicted RBP16.39■□□□□ 0.21
TRIO-220ENST00000512979 KIF27Q86VH2 1401 aa16.36■□□□□ 0.21
TRIO-220ENST00000512979 JPH4Q96JJ6 628 aa16.36■□□□□ 0.21
TRIO-220ENST00000512979 PRG4Q92954 1404 aaPredicted RBP16.36■□□□□ 0.21
TRIO-220ENST00000512979 RNF39Q9H2S5 420 aa16.35■□□□□ 0.21
TRIO-220ENST00000512979 IGF1RP08069 1367 aa16.35■□□□□ 0.21
TRIO-220ENST00000512979 PLCB2Q00722 1185 aa16.34■□□□□ 0.21
TRIO-220ENST00000512979 RUSC2Q8N2Y8 1516 aa16.32■□□□□ 0.2
TRIO-220ENST00000512979 CUL7Q14999 1698 aa16.28■□□□□ 0.2
TRIO-220ENST00000512979 KIAA0586Q9BVV6 1533 aa16.26■□□□□ 0.19
TRIO-220ENST00000512979 CARMIL1Q5VZK9 1371 aa16.26■□□□□ 0.19
TRIO-220ENST00000512979 ZBTB12Q9Y330 459 aaPredicted RBP16.22■□□□□ 0.19
TRIO-220ENST00000512979 ABCB7O75027 752 aa16.2■□□□□ 0.18
TRIO-220ENST00000512979 PKD2Q13563 968 aa16.2■□□□□ 0.18
TRIO-220ENST00000512979 C1QBPQ07021 282 aaKnown RBP16.18■□□□□ 0.18
TRIO-220ENST00000512979 NPM1P06748 294 aaKnown RBP eCLIP16.17■□□□□ 0.18
TRIO-220ENST00000512979 ADCY10Q96PN6 1610 aa16.13■□□□□ 0.17
TRIO-220ENST00000512979 HAP1P54257 671 aaPredicted RBP16.13■□□□□ 0.17
TRIO-220ENST00000512979 TTBK1Q5TCY1 1321 aaPredicted RBP16.12■□□□□ 0.17
TRIO-220ENST00000512979 PTPRGP23470 1445 aa16.11■□□□□ 0.17
TRIO-220ENST00000512979 FAM69CQ0P6D2 419 aa16.11■□□□□ 0.17
TRIO-220ENST00000512979 CARMIL2Q6F5E8 1435 aa16.11■□□□□ 0.17
TRIO-220ENST00000512979 MAPKBP1O60336 1514 aa16.1■□□□□ 0.17
TRIO-220ENST00000512979 IQGAP2Q13576 1575 aa16.1■□□□□ 0.17
TRIO-220ENST00000512979 ABCC10Q5T3U5 1492 aa16.1■□□□□ 0.17
TRIO-220ENST00000512979 RAPGEF2Q9Y4G8 1499 aa16.1■□□□□ 0.17
TRIO-220ENST00000512979 KIF13AQ9H1H9 1805 aa16.09■□□□□ 0.17
TRIO-220ENST00000512979 TNIKQ9UKE5 1360 aa16.09■□□□□ 0.17
TRIO-220ENST00000512979 KLHL34Q8N239 644 aa16.04■□□□□ 0.16
TRIO-220ENST00000512979 DIP2BQ9P265 1576 aa16.04■□□□□ 0.16
TRIO-220ENST00000512979 DISP1Q96F81 1524 aa16.03■□□□□ 0.16
TRIO-220ENST00000512979 SPOCK2Q92563 424 aa16.01■□□□□ 0.15
TRIO-220ENST00000512979 ABCC2Q92887 1545 aa16■□□□□ 0.15
TRIO-220ENST00000512979 UGGT2Q9NYU1 1516 aa16■□□□□ 0.15
TRIO-220ENST00000512979 ZNF692Q9BU19 519 aaPredicted RBP16■□□□□ 0.15
TRIO-220ENST00000512979 UACAQ9BZF9 1416 aa15.99■□□□□ 0.15
TRIO-220ENST00000512979 UHRF1BP1LA0JNW5 1464 aa15.97■□□□□ 0.15
TRIO-220ENST00000512979 KIAA0556O60303 1618 aa15.96■□□□□ 0.15
TRIO-220ENST00000512979 ASXL2Q76L83 1435 aa15.95■□□□□ 0.14
TRIO-220ENST00000512979 STAG3Q9UJ98 1225 aa15.94■□□□□ 0.14
TRIO-220ENST00000512979 PLB1Q6P1J6 1458 aa15.94■□□□□ 0.14
TRIO-220ENST00000512979 PRXQ9BXM0 1461 aa15.94■□□□□ 0.14
TRIO-220ENST00000512979 ECM2O94769 699 aaPredicted RBP15.93■□□□□ 0.14
TRIO-220ENST00000512979 CTTNBP2Q8WZ74 1663 aa15.91■□□□□ 0.14
TRIO-220ENST00000512979 TSPOAP1O95153 1857 aa15.91■□□□□ 0.14
TRIO-220ENST00000512979 KDM5BQ9UGL1 1544 aa15.9■□□□□ 0.14
TRIO-220ENST00000512979 GOLGA3Q08378 1498 aa15.9■□□□□ 0.14
TRIO-220ENST00000512979 DSG3P32926 999 aa15.89■□□□□ 0.13
TRIO-220ENST00000512979 KDM6BO15054 1643 aa15.89■□□□□ 0.13
TRIO-220ENST00000512979 SPDYE2BA6NHP3 402 aa15.88■□□□□ 0.13
TRIO-220ENST00000512979 SPDYE6P0CI01 402 aa15.88■□□□□ 0.13
TRIO-220ENST00000512979 SPDYE2Q495Y8 402 aa15.88■□□□□ 0.13
TRIO-220ENST00000512979 PLCD3Q8N3E9 789 aa15.88■□□□□ 0.13
TRIO-220ENST00000512979 GLI2P10070 1586 aa15.87■□□□□ 0.13
TRIO-220ENST00000512979 SSUH2Q9Y2M2 353 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms