RNA–Protein interactions for RNA: ENST00000510056.5

MATR3-215, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-215ENST00000510056 PKD2Q13563 968 aa11.14□□□□□ -0.63
MATR3-215ENST00000510056 CFTRP13569 1480 aa11.14□□□□□ -0.63
MATR3-215ENST00000510056 ZNF608Q9ULD9 1512 aaPredicted RBP11.14□□□□□ -0.63
MATR3-215ENST00000510056 HRCP23327 699 aa11.12□□□□□ -0.63
MATR3-215ENST00000510056 IFT140Q96RY7 1462 aa11.05□□□□□ -0.64
MATR3-215ENST00000510056 ARAP1Q96P48 1450 aa11.05□□□□□ -0.64
MATR3-215ENST00000510056 SLC4A2P04920 1241 aa11.04□□□□□ -0.64
MATR3-215ENST00000510056 PIAS4Q8N2W9 510 aaPredicted RBP11.04□□□□□ -0.64
MATR3-215ENST00000510056 CNKSR2Q8WXI2 1034 aa11.04□□□□□ -0.64
MATR3-215ENST00000510056 IFNLR1Q8IU57 520 aaPredicted RBP11.02□□□□□ -0.65
MATR3-215ENST00000510056 CHD1O14646 1710 aa11.02□□□□□ -0.65
MATR3-215ENST00000510056 EIF4G3O43432 1585 aaKnown RBP11.01□□□□□ -0.65
MATR3-215ENST00000510056 AQRO60306 1485 aaKnown RBP eCLIP11.01□□□□□ -0.654e-7■■■■□ 22.7
MATR3-215ENST00000510056 TOP2AP11388 1531 aaKnown RBP11.01□□□□□ -0.65
MATR3-215ENST00000510056 NBR1Q14596 966 aa11.01□□□□□ -0.65
MATR3-215ENST00000510056 RSF1Q96T23 1441 aaPredicted RBP11□□□□□ -0.65
MATR3-215ENST00000510056 TOPBP1Q92547 1522 aa10.99□□□□□ -0.65
MATR3-215ENST00000510056 PRDM2Q13029 1718 aa10.98□□□□□ -0.65
MATR3-215ENST00000510056 ATF5Q9Y2D1 282 aaPredicted RBP10.94□□□□□ -0.66
MATR3-215ENST00000510056 LOC105371045A0A1W2PR82 267 aa10.93□□□□□ -0.66
MATR3-215ENST00000510056 CCDC88BA6NC98 1476 aa10.93□□□□□ -0.66
MATR3-215ENST00000510056 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.92□□□□□ -0.66
MATR3-215ENST00000510056 TARBP1Q13395 1621 aaKnown RBP10.91□□□□□ -0.66
MATR3-215ENST00000510056 TDRD9Q8NDG6 1382 aaKnown RBP10.9□□□□□ -0.66
MATR3-215ENST00000510056 DNMBPQ6XZF7 1577 aa10.9□□□□□ -0.66
MATR3-215ENST00000510056 MAPK8IP2Q13387 824 aaPredicted RBP10.89□□□□□ -0.67
MATR3-215ENST00000510056 RAD54L2Q9Y4B4 1467 aa10.89□□□□□ -0.67
MATR3-215ENST00000510056 ABCC8Q09428 1581 aa10.88□□□□□ -0.67
MATR3-215ENST00000510056 CHMP7Q8WUX9 453 aaPredicted RBP10.88□□□□□ -0.67
MATR3-215ENST00000510056 ARID3AQ99856 593 aa10.88□□□□□ -0.67
MATR3-215ENST00000510056 POLA1P09884 1462 aaPredicted RBP10.86□□□□□ -0.67
MATR3-215ENST00000510056 ERICH6Q7L0X2 663 aa10.86□□□□□ -0.67
MATR3-215ENST00000510056 SNAPC4Q5SXM2 1469 aa10.85□□□□□ -0.67
MATR3-215ENST00000510056 VASPP50552 380 aaPredicted RBP10.85□□□□□ -0.67
MATR3-215ENST00000510056 BBXQ8WY36 941 aaPredicted RBP10.85□□□□□ -0.67
MATR3-215ENST00000510056 SOGA1O94964 1423 aa10.83□□□□□ -0.67
MATR3-215ENST00000510056 CLASP1Q7Z460 1538 aa10.83□□□□□ -0.68
MATR3-215ENST00000510056 SYNJ1O43426 1573 aa10.81□□□□□ -0.68
MATR3-215ENST00000510056 PELP1Q8IZL8 1130 aaKnown RBP10.8□□□□□ -0.68
MATR3-215ENST00000510056 GAPVD1Q14C86 1478 aa10.79□□□□□ -0.68
MATR3-215ENST00000510056 RGL2O15211 777 aa10.77□□□□□ -0.68
MATR3-215ENST00000510056 SPRYD3Q8NCJ5 442 aa10.77□□□□□ -0.68
MATR3-215ENST00000510056 FGD5Q6ZNL6 1462 aa10.76□□□□□ -0.69
MATR3-215ENST00000510056 MAGI1Q96QZ7 1491 aaPredicted RBP10.75□□□□□ -0.69
MATR3-215ENST00000510056 SYNJ2O15056 1496 aa10.74□□□□□ -0.69
MATR3-215ENST00000510056 GRIN2BQ13224 1484 aa10.74□□□□□ -0.69
MATR3-215ENST00000510056 EIF5BO60841 1220 aaKnown RBP10.74□□□□□ -0.69
MATR3-215ENST00000510056 PLEKHG5O94827 1062 aa10.73□□□□□ -0.69
MATR3-215ENST00000510056 ERCC6L2Q5T890 1561 aa10.72□□□□□ -0.69
MATR3-215ENST00000510056 BRPF1P55201 1214 aaPredicted RBP10.71□□□□□ -0.69
MATR3-215ENST00000510056 CUX1P39880 1505 aa10.7□□□□□ -0.7
MATR3-215ENST00000510056 ECM2O94769 699 aaPredicted RBP10.68□□□□□ -0.7
MATR3-215ENST00000510056 PBRM1Q86U86 1689 aa10.68□□□□□ -0.7
MATR3-215ENST00000510056 FBXO3Q9UK99 471 aa10.68□□□□□ -0.7
MATR3-215ENST00000510056 WDR97A6NE52 1622 aa10.68□□□□□ -0.7
MATR3-215ENST00000510056 ATXN8OSP0DMR3 200 aa10.67□□□□□ -0.7
MATR3-215ENST00000510056 ILDR1Q86SU0 546 aaPredicted RBP10.67□□□□□ -0.7
MATR3-215ENST00000510056 MYCNP04198 464 aaPredicted RBP10.66□□□□□ -0.7
MATR3-215ENST00000510056 C1orf115Q9H7X2 142 aa10.65□□□□□ -0.71
MATR3-215ENST00000510056 KIF13AQ9H1H9 1805 aa10.64□□□□□ -0.71
MATR3-215ENST00000510056 IGSF3O75054 1194 aa10.63□□□□□ -0.71
MATR3-215ENST00000510056 CHGAP10645 457 aaKnown RBP10.63□□□□□ -0.71
MATR3-215ENST00000510056 CEP170Q5SW79 1584 aa10.63□□□□□ -0.71
MATR3-215ENST00000510056 FAM69CQ0P6D2 419 aa10.62□□□□□ -0.71
MATR3-215ENST00000510056 GRIN2AQ12879 1464 aa10.61□□□□□ -0.71
MATR3-215ENST00000510056 KDM4FA0A1W2PPD8 638 aa10.61□□□□□ -0.71
MATR3-215ENST00000510056 ARID3CA6NKF2 412 aa10.61□□□□□ -0.71
MATR3-215ENST00000510056 NECTIN2Q92692 538 aa10.6□□□□□ -0.71
MATR3-215ENST00000510056 ABCA5Q8WWZ7 1642 aa10.59□□□□□ -0.71
MATR3-215ENST00000510056 ABCA10Q8WWZ4 1543 aa10.57□□□□□ -0.72
MATR3-215ENST00000510056 NUP160Q12769 1436 aa10.56□□□□□ -0.72
MATR3-215ENST00000510056 PRG4Q92954 1404 aaPredicted RBP10.55□□□□□ -0.72
MATR3-215ENST00000510056 ADAMTS12P58397 1594 aa10.54□□□□□ -0.72
MATR3-215ENST00000510056 SHROOM2Q13796 1616 aa10.54□□□□□ -0.72
MATR3-215ENST00000510056 SPDYE4A6NLX3 237 aa10.53□□□□□ -0.72
MATR3-215ENST00000510056 TSPOAP1O95153 1857 aa10.53□□□□□ -0.72
MATR3-215ENST00000510056 ZNF428Q96B54 188 aa10.52□□□□□ -0.72
MATR3-215ENST00000510056 JPH4Q96JJ6 628 aa10.52□□□□□ -0.72
MATR3-215ENST00000510056 ABCC10Q5T3U5 1492 aa10.52□□□□□ -0.73
MATR3-215ENST00000510056 TTBK1Q5TCY1 1321 aaPredicted RBP10.52□□□□□ -0.73
MATR3-215ENST00000510056 NEUROD2Q15784 382 aa10.51□□□□□ -0.73
MATR3-215ENST00000510056 KDM6BO15054 1643 aa10.51□□□□□ -0.73
MATR3-215ENST00000510056 FHAD1B1AJZ9 1412 aa10.51□□□□□ -0.73
MATR3-215ENST00000510056 WRNQ14191 1432 aaPredicted RBP eCLIP10.5□□□□□ -0.736e-9■■■■■ 30.6
MATR3-215ENST00000510056 DIP2BQ9P265 1576 aa10.49□□□□□ -0.73
MATR3-215ENST00000510056 RNF216Q9NWF9 866 aaPredicted RBP10.47□□□□□ -0.73
MATR3-215ENST00000510056 ADCY10Q96PN6 1610 aa10.45□□□□□ -0.74
MATR3-215ENST00000510056 MAPKBP1O60336 1514 aa10.44□□□□□ -0.74
MATR3-215ENST00000510056 ERICH3Q5RHP9 1530 aa10.42□□□□□ -0.74
MATR3-215ENST00000510056 SCAF1Q9H7N4 1312 aaKnown RBP10.42□□□□□ -0.74
MATR3-215ENST00000510056 ADGRL1O94910 1474 aa10.41□□□□□ -0.74
MATR3-215ENST00000510056 LMOD2Q6P5Q4 547 aa10.41□□□□□ -0.74
MATR3-215ENST00000510056 RUSC2Q8N2Y8 1516 aa10.4□□□□□ -0.74
MATR3-215ENST00000510056 TOP2BQ02880 1626 aa10.39□□□□□ -0.75
MATR3-215ENST00000510056 MYT1Q01538 1121 aa10.39□□□□□ -0.75
MATR3-215ENST00000510056 NKX1-1Q15270 411 aaPredicted RBP10.39□□□□□ -0.75
MATR3-215ENST00000510056 BIVM-ERCC5R4GMW8 1640 aa10.38□□□□□ -0.75
MATR3-215ENST00000510056 SLC24A3Q9HC58 644 aa10.38□□□□□ -0.75
MATR3-215ENST00000510056 CCDC9Q9Y3X0 531 aaKnown RBP10.38□□□□□ -0.75
MATR3-215ENST00000510056 HECW2Q9P2P5 1572 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms