RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 CECR2Q9BXF3 1484 aa9.68□□□□□ -0.86
NEK1-204ENST00000509912 RNF39Q9H2S5 420 aa9.68□□□□□ -0.86
NEK1-204ENST00000509912 SPRYD3Q8NCJ5 442 aa9.67□□□□□ -0.86
NEK1-204ENST00000509912 CUX2O14529 1486 aa9.67□□□□□ -0.86
NEK1-204ENST00000509912 BAZ1AQ9NRL2 1556 aaPredicted RBP9.65□□□□□ -0.86
NEK1-204ENST00000509912 SMARCA4P51532 1647 aa9.62□□□□□ -0.87
NEK1-204ENST00000509912 RNF25Q96BH1 459 aaPredicted RBP9.6□□□□□ -0.87
NEK1-204ENST00000509912 LAMC3Q9Y6N6 1575 aa9.58□□□□□ -0.88
NEK1-204ENST00000509912 ATAD2BQ9ULI0 1458 aa9.56□□□□□ -0.88
NEK1-204ENST00000509912 TIMELESSQ9UNS1 1208 aa9.55□□□□□ -0.88
NEK1-204ENST00000509912 TULP1O00294 542 aaPredicted RBP9.52□□□□□ -0.88
NEK1-204ENST00000509912 NKX1-1Q15270 411 aaPredicted RBP9.52□□□□□ -0.88
NEK1-204ENST00000509912 DSG3P32926 999 aa9.52□□□□□ -0.89
NEK1-204ENST00000509912 NBR1Q14596 966 aa9.51□□□□□ -0.89
NEK1-204ENST00000509912 SSUH2Q9Y2M2 353 aa9.5□□□□□ -0.89
NEK1-204ENST00000509912 ZBTB12Q9Y330 459 aaPredicted RBP9.48□□□□□ -0.89
NEK1-204ENST00000509912 PRDM2Q13029 1718 aa9.47□□□□□ -0.89
NEK1-204ENST00000509912 STAG3Q9UJ98 1225 aa9.46□□□□□ -0.89
NEK1-204ENST00000509912 C1QBPQ07021 282 aaKnown RBP9.45□□□□□ -0.9
NEK1-204ENST00000509912 SPDYE2BA6NHP3 402 aa9.44□□□□□ -0.9
NEK1-204ENST00000509912 SPDYE6P0CI01 402 aa9.44□□□□□ -0.9
NEK1-204ENST00000509912 SPDYE2Q495Y8 402 aa9.44□□□□□ -0.9
NEK1-204ENST00000509912 WDR97A6NE52 1622 aa9.44□□□□□ -0.9
NEK1-204ENST00000509912 THOC2Q8NI27 1593 aaKnown RBP9.42□□□□□ -0.9
NEK1-204ENST00000509912 STK25O00506 426 aa9.39□□□□□ -0.91
NEK1-204ENST00000509912 HS6ST3Q8IZP7 471 aa9.39□□□□□ -0.91
NEK1-204ENST00000509912 GTPBP6O43824 516 aaPredicted RBP9.37□□□□□ -0.91
NEK1-204ENST00000509912 BAZ1BQ9UIG0 1483 aaKnown RBP9.37□□□□□ -0.91
NEK1-204ENST00000509912 WDR62O43379 1518 aa9.37□□□□□ -0.91
NEK1-204ENST00000509912 DCAF8Q5TAQ9 597 aa9.36□□□□□ -0.91
NEK1-204ENST00000509912 TRIM41Q8WV44 630 aa9.35□□□□□ -0.91
NEK1-204ENST00000509912 TOP2AP11388 1531 aaKnown RBP9.34□□□□□ -0.91
NEK1-204ENST00000509912 PDS5BQ9NTI5 1447 aa9.33□□□□□ -0.92
NEK1-204ENST00000509912 PLEKHG5O94827 1062 aa9.33□□□□□ -0.92
NEK1-204ENST00000509912 DNAJC5Q9H3Z4 198 aa9.32□□□□□ -0.92
NEK1-204ENST00000509912 ABCC8Q09428 1581 aa9.31□□□□□ -0.92
NEK1-204ENST00000509912 NUBP1P53384 320 aa9.3□□□□□ -0.92
NEK1-204ENST00000509912 GTF3C3Q9Y5Q9 886 aa9.3□□□□□ -0.92
NEK1-204ENST00000509912 CLEC11AQ9Y240 323 aa9.3□□□□□ -0.92
NEK1-204ENST00000509912 CFTRP13569 1480 aa9.29□□□□□ -0.92
NEK1-204ENST00000509912 BCL11BQ9C0K0 894 aaPredicted RBP9.29□□□□□ -0.92
NEK1-204ENST00000509912 MROH2BQ7Z745 1585 aa9.29□□□□□ -0.92
NEK1-204ENST00000509912 PYGBP11216 843 aa9.29□□□□□ -0.92
NEK1-204ENST00000509912 STK24Q9Y6E0 443 aa9.28□□□□□ -0.92
NEK1-204ENST00000509912 CADPSQ9ULU8 1353 aa9.28□□□□□ -0.92
NEK1-204ENST00000509912 RIOK3O14730 519 aaKnown RBP9.27□□□□□ -0.92
NEK1-204ENST00000509912 RASEFQ8IZ41 740 aa9.26□□□□□ -0.93
NEK1-204ENST00000509912 MRC2Q9UBG0 1479 aa9.26□□□□□ -0.93
NEK1-204ENST00000509912 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.26□□□□□ -0.93
NEK1-204ENST00000509912 ZFP91Q96JP5 570 aaPredicted RBP9.26□□□□□ -0.93
NEK1-204ENST00000509912 ZBTB47Q9UFB7 747 aaPredicted RBP9.26□□□□□ -0.93
NEK1-204ENST00000509912 CADPS2Q86UW7 1296 aa9.23□□□□□ -0.93
NEK1-204ENST00000509912 KIF21AQ7Z4S6 1674 aa9.2□□□□□ -0.94
NEK1-204ENST00000509912 GSE1Q14687 1217 aa9.19□□□□□ -0.94
NEK1-204ENST00000509912 KCNV2Q8TDN2 545 aa9.19□□□□□ -0.94
NEK1-204ENST00000509912 MNX1P50219 401 aaPredicted RBP9.18□□□□□ -0.94
NEK1-204ENST00000509912 RSF1Q96T23 1441 aaPredicted RBP9.17□□□□□ -0.94
NEK1-204ENST00000509912 FAM212AQ96EL1 285 aa9.16□□□□□ -0.94
NEK1-204ENST00000509912 CREBZFQ9NS37 354 aa9.15□□□□□ -0.94
NEK1-204ENST00000509912 WIZO95785 1651 aa9.14□□□□□ -0.95
NEK1-204ENST00000509912 ERCC6Q03468 1493 aa9.14□□□□□ -0.95
NEK1-204ENST00000509912 VGFO15240 615 aaPredicted RBP9.13□□□□□ -0.95
NEK1-204ENST00000509912 CEP164Q9UPV0 1460 aa9.13□□□□□ -0.95
NEK1-204ENST00000509912 IFT140Q96RY7 1462 aa9.11□□□□□ -0.95
NEK1-204ENST00000509912 PRR29P0C7W0 189 aa9.11□□□□□ -0.95
NEK1-204ENST00000509912 TMEM132AQ24JP5 1023 aa9.11□□□□□ -0.95
NEK1-204ENST00000509912 LMOD2Q6P5Q4 547 aa9.11□□□□□ -0.95
NEK1-204ENST00000509912 DNMBPQ6XZF7 1577 aa9.1□□□□□ -0.95
NEK1-204ENST00000509912 TSPYL2Q9H2G4 693 aaPredicted RBP9.09□□□□□ -0.95
NEK1-204ENST00000509912 CHADLQ6NUI6 762 aa9.09□□□□□ -0.95
NEK1-204ENST00000509912 SUPT5HO00267 1087 aaKnown RBP9.09□□□□□ -0.95
NEK1-204ENST00000509912 C14orf37Q86TY3 774 aa9.08□□□□□ -0.96
NEK1-204ENST00000509912 PCDHB8Q9UN66 801 aa9.08□□□□□ -0.96
NEK1-204ENST00000509912 PCDHB13Q9Y5F0 798 aa9.08□□□□□ -0.96
NEK1-204ENST00000509912 FANCD2Q9BXW9 1451 aa9.08□□□□□ -0.96
NEK1-204ENST00000509912 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.06□□□□□ -0.96
NEK1-204ENST00000509912 BRPF1P55201 1214 aaPredicted RBP9.05□□□□□ -0.96
NEK1-204ENST00000509912 CACNB1Q02641 598 aaPredicted RBP9.04□□□□□ -0.96
NEK1-204ENST00000509912 NESP48681 1621 aa9.04□□□□□ -0.96
NEK1-204ENST00000509912 TARBP1Q13395 1621 aaKnown RBP9.04□□□□□ -0.96
NEK1-204ENST00000509912 SEMA3EO15041 775 aa9.03□□□□□ -0.96
NEK1-204ENST00000509912 PPP1R37O75864 691 aa9.03□□□□□ -0.96
NEK1-204ENST00000509912 SPDYE1Q8NFV5 336 aaPredicted RBP9.02□□□□□ -0.97
NEK1-204ENST00000509912 WDR70Q9NW82 654 aa9.01□□□□□ -0.97
NEK1-204ENST00000509912 URB2Q14146 1524 aaKnown RBP9.01□□□□□ -0.97
NEK1-204ENST00000509912 SLC24A3Q9HC58 644 aa9□□□□□ -0.97
NEK1-204ENST00000509912 CCDC88BA6NC98 1476 aa9□□□□□ -0.97
NEK1-204ENST00000509912 NEUROD2Q15784 382 aa8.99□□□□□ -0.97
NEK1-204ENST00000509912 REM2Q8IYK8 340 aaPredicted RBP8.99□□□□□ -0.97
NEK1-204ENST00000509912 MFRPQ9BY79 579 aa8.99□□□□□ -0.97
NEK1-204ENST00000509912 TOPBP1Q92547 1522 aa8.97□□□□□ -0.97
NEK1-204ENST00000509912 P3H3Q8IVL6 736 aa8.97□□□□□ -0.97
NEK1-204ENST00000509912 BIVM-ERCC5R4GMW8 1640 aa8.96□□□□□ -0.97
NEK1-204ENST00000509912 PITPNM1O00562 1244 aa8.94□□□□□ -0.98
NEK1-204ENST00000509912 ZC3H15Q8WU90 426 aaKnown RBP8.94□□□□□ -0.98
NEK1-204ENST00000509912 MAGI1Q96QZ7 1491 aaPredicted RBP8.94□□□□□ -0.98
NEK1-204ENST00000509912 CHRM1P11229 460 aaPredicted RBP8.92□□□□□ -0.98
NEK1-204ENST00000509912 CLASP1Q7Z460 1538 aa8.92□□□□□ -0.98
NEK1-204ENST00000509912 GPBP1L1Q9HC44 474 aaPredicted RBP8.91□□□□□ -0.98
NEK1-204ENST00000509912 ABCA5Q8WWZ7 1642 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms