RNA–Protein interactions for RNA: ENST00000509351.5

VNN3-211, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-211ENST00000509351 POLA2Q14181 598 aa9.88□□□□□ -0.83
VNN3-211ENST00000509351 RGL2O15211 777 aa9.85□□□□□ -0.83
VNN3-211ENST00000509351 MKRN4PQ13434 485 aaPredicted RBP9.85□□□□□ -0.83
VNN3-211ENST00000509351 C19orf67A6NJJ6 358 aa9.84□□□□□ -0.83
VNN3-211ENST00000509351 ZBTB12Q9Y330 459 aaPredicted RBP9.84□□□□□ -0.83
VNN3-211ENST00000509351 SPOCK2Q92563 424 aa9.83□□□□□ -0.84
VNN3-211ENST00000509351 PCDH10Q9P2E7 1040 aa9.8□□□□□ -0.84
VNN3-211ENST00000509351 POTEMA6NI47 508 aa9.79□□□□□ -0.84
VNN3-211ENST00000509351 KLHL34Q8N239 644 aa9.79□□□□□ -0.84
VNN3-211ENST00000509351 CHGAP10645 457 aaKnown RBP9.75□□□□□ -0.85
VNN3-211ENST00000509351 POTEGQ6S5H5 508 aa9.72□□□□□ -0.85
VNN3-211ENST00000509351 POTEIP0CG38 1075 aa9.71□□□□□ -0.85
VNN3-211ENST00000509351 PODXL2Q9NZ53 605 aa9.7□□□□□ -0.86
VNN3-211ENST00000509351 RANGAP1P46060 587 aaPredicted RBP9.69□□□□□ -0.86
VNN3-211ENST00000509351 SUPT5HO00267 1087 aaKnown RBP9.65□□□□□ -0.87
VNN3-211ENST00000509351 PRKAR2AP13861 404 aaKnown RBP9.65□□□□□ -0.87
VNN3-211ENST00000509351 OSCARQ8IYS5 282 aa9.59□□□□□ -0.87
VNN3-211ENST00000509351 HS6ST3Q8IZP7 471 aa9.58□□□□□ -0.88
VNN3-211ENST00000509351 OTUD5Q96G74 571 aa9.56□□□□□ -0.88
VNN3-211ENST00000509351 PLCD3Q8N3E9 789 aa9.53□□□□□ -0.88
VNN3-211ENST00000509351 CIZ1Q9ULV3 898 aaPredicted RBP9.53□□□□□ -0.88
VNN3-211ENST00000509351 BRPF1P55201 1214 aaPredicted RBP9.51□□□□□ -0.89
VNN3-211ENST00000509351 STAG3Q9UJ98 1225 aa9.5□□□□□ -0.89
VNN3-211ENST00000509351 CLCN6P51797 869 aa9.48□□□□□ -0.89
VNN3-211ENST00000509351 NKX1-1Q15270 411 aaPredicted RBP9.48□□□□□ -0.89
VNN3-211ENST00000509351 GTPBP6O43824 516 aaPredicted RBP9.47□□□□□ -0.89
VNN3-211ENST00000509351 UBTFP17480 764 aaKnown RBP9.47□□□□□ -0.89
VNN3-211ENST00000509351 TRIM26Q12899 539 aaPredicted RBP9.45□□□□□ -0.9
VNN3-211ENST00000509351 MIER1Q8N108 512 aa9.45□□□□□ -0.9
VNN3-211ENST00000509351 LMOD2Q6P5Q4 547 aa9.43□□□□□ -0.9
VNN3-211ENST00000509351 SPDYE2BA6NHP3 402 aa9.42□□□□□ -0.9
VNN3-211ENST00000509351 SPDYE6P0CI01 402 aa9.42□□□□□ -0.9
VNN3-211ENST00000509351 SPDYE2Q495Y8 402 aa9.42□□□□□ -0.9
VNN3-211ENST00000509351 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.42□□□□□ -0.9
VNN3-211ENST00000509351 NPM2Q86SE8 214 aaKnown RBP9.42□□□□□ -0.9
VNN3-211ENST00000509351 TRIM41Q8WV44 630 aa9.42□□□□□ -0.9
VNN3-211ENST00000509351 SPDYE1Q8NFV5 336 aaPredicted RBP9.41□□□□□ -0.9
VNN3-211ENST00000509351 RNF25Q96BH1 459 aaPredicted RBP9.41□□□□□ -0.9
VNN3-211ENST00000509351 DCBLD2Q96PD2 775 aa9.41□□□□□ -0.9
VNN3-211ENST00000509351 P3H3Q8IVL6 736 aa9.39□□□□□ -0.91
VNN3-211ENST00000509351 NEUROD2Q15784 382 aa9.36□□□□□ -0.91
VNN3-211ENST00000509351 HRCP23327 699 aa9.34□□□□□ -0.91
VNN3-211ENST00000509351 POTEB2H3BUK9 544 aa9.34□□□□□ -0.92
VNN3-211ENST00000509351 ZBTB47Q9UFB7 747 aaPredicted RBP9.31□□□□□ -0.92
VNN3-211ENST00000509351 CLEC11AQ9Y240 323 aa9.31□□□□□ -0.92
VNN3-211ENST00000509351 KCNV2Q8TDN2 545 aa9.29□□□□□ -0.92
VNN3-211ENST00000509351 NISCHQ9Y2I1 1504 aa9.28□□□□□ -0.92
VNN3-211ENST00000509351 STK25O00506 426 aa9.27□□□□□ -0.93
VNN3-211ENST00000509351 RIOK3O14730 519 aaKnown RBP9.27□□□□□ -0.93
VNN3-211ENST00000509351 CD44P16070 742 aaKnown RBP9.27□□□□□ -0.93
VNN3-211ENST00000509351 ZC3H15Q8WU90 426 aaKnown RBP9.27□□□□□ -0.93
VNN3-211ENST00000509351 ZNF692Q9BU19 519 aaPredicted RBP9.27□□□□□ -0.93
VNN3-211ENST00000509351 PLEKHG5O94827 1062 aa9.26□□□□□ -0.93
VNN3-211ENST00000509351 LCE2DQ5TA82 110 aaPredicted RBP9.26□□□□□ -0.93
VNN3-211ENST00000509351 SLC24A3Q9HC58 644 aa9.26□□□□□ -0.93
VNN3-211ENST00000509351 CHADLQ6NUI6 762 aa9.25□□□□□ -0.93
VNN3-211ENST00000509351 ZMYND15Q9H091 742 aa9.25□□□□□ -0.93
VNN3-211ENST00000509351 GSE1Q14687 1217 aa9.22□□□□□ -0.93
VNN3-211ENST00000509351 RSPH6AQ9H0K4 717 aa9.22□□□□□ -0.93
VNN3-211ENST00000509351 RYDENQ9NUL5 291 aaKnown RBP9.21□□□□□ -0.94
VNN3-211ENST00000509351 WDR70Q9NW82 654 aa9.21□□□□□ -0.94
VNN3-211ENST00000509351 SSUH2Q9Y2M2 353 aa9.21□□□□□ -0.94
VNN3-211ENST00000509351 PABPN1Q86U42 306 aaKnown RBP eCLIP9.19□□□□□ -0.94
VNN3-211ENST00000509351 VGFO15240 615 aaPredicted RBP9.18□□□□□ -0.94
VNN3-211ENST00000509351 ARID3AQ99856 593 aa9.17□□□□□ -0.94
VNN3-211ENST00000509351 STK24Q9Y6E0 443 aa9.15□□□□□ -0.94
VNN3-211ENST00000509351 CADPS2Q86UW7 1296 aa9.14□□□□□ -0.95
VNN3-211ENST00000509351 FAM163AQ96GL9 167 aaPredicted RBP9.14□□□□□ -0.95
VNN3-211ENST00000509351 BCL11BQ9C0K0 894 aaPredicted RBP9.14□□□□□ -0.95
VNN3-211ENST00000509351 ZNF579Q8NAF0 562 aaKnown RBP9.13□□□□□ -0.95
VNN3-211ENST00000509351 CDAN1Q8IWY9 1227 aa9.11□□□□□ -0.95
VNN3-211ENST00000509351 C1orf115Q9H7X2 142 aa9.11□□□□□ -0.95
VNN3-211ENST00000509351 NUBP1P53384 320 aa9.11□□□□□ -0.95
VNN3-211ENST00000509351 DCAF8Q5TAQ9 597 aa9.11□□□□□ -0.95
VNN3-211ENST00000509351 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.1□□□□□ -0.95
VNN3-211ENST00000509351 ZMYND10O75800 440 aa9.1□□□□□ -0.95
VNN3-211ENST00000509351 PRR29P0C7W0 189 aa9.1□□□□□ -0.95
VNN3-211ENST00000509351 MAMSTRQ6ZN01 415 aa9.1□□□□□ -0.95
VNN3-211ENST00000509351 ZFP91Q96JP5 570 aaPredicted RBP9.1□□□□□ -0.95
VNN3-211ENST00000509351 SGIP1Q9BQI5 828 aa9.1□□□□□ -0.95
VNN3-211ENST00000509351 ARHGEF1Q92888 912 aaKnown RBP9.08□□□□□ -0.96
VNN3-211ENST00000509351 CCDC9Q9Y3X0 531 aaKnown RBP9.07□□□□□ -0.96
VNN3-211ENST00000509351 TESPA1A2RU30 521 aaPredicted RBP9.06□□□□□ -0.96
VNN3-211ENST00000509351 SEMA3EO15041 775 aa9.06□□□□□ -0.96
VNN3-211ENST00000509351 FARP1Q9Y4F1 1045 aaPredicted RBP9.05□□□□□ -0.96
VNN3-211ENST00000509351 ZBTB7CA1YPR0 619 aa9.05□□□□□ -0.96
VNN3-211ENST00000509351 IL27Q8NEV9 243 aa9.05□□□□□ -0.96
VNN3-211ENST00000509351 GPBP1L1Q9HC44 474 aaPredicted RBP9.04□□□□□ -0.96
VNN3-211ENST00000509351 GALR2O43603 387 aaPredicted RBP9.03□□□□□ -0.96
VNN3-211ENST00000509351 MMRN1Q13201 1228 aa9.03□□□□□ -0.96
VNN3-211ENST00000509351 PDIA4P13667 645 aaKnown RBP9.02□□□□□ -0.96
VNN3-211ENST00000509351 POTEJP0CG39 1038 aa9.02□□□□□ -0.97
VNN3-211ENST00000509351 ARID3CA6NKF2 412 aa9.01□□□□□ -0.97
VNN3-211ENST00000509351 CHRM1P11229 460 aaPredicted RBP9.01□□□□□ -0.97
VNN3-211ENST00000509351 BARGINQ6ZT62 677 aa9□□□□□ -0.97
VNN3-211ENST00000509351 APBB1O00213 710 aa8.99□□□□□ -0.97
VNN3-211ENST00000509351 NECTIN2Q92692 538 aa8.98□□□□□ -0.97
VNN3-211ENST00000509351 FAM212AQ96EL1 285 aa8.98□□□□□ -0.97
VNN3-211ENST00000509351 E2F4Q16254 413 aa8.97□□□□□ -0.97
VNN3-211ENST00000509351 MKRN3Q13064 507 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms