RNA–Protein interactions for RNA: ENST00000506275.1

ITGA1-204, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 7,461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-204ENST00000506275 TMC1Q8TDI8 760 aa3.45□□□□□ -1.86
ITGA1-204ENST00000506275 NEUROD2Q15784 382 aa3.44□□□□□ -1.86
ITGA1-204ENST00000506275 UPF2Q9HAU5 1272 aaKnown RBP3.44□□□□□ -1.86
ITGA1-204ENST00000506275 NCLP19338 710 aaKnown RBP3.44□□□□□ -1.86
ITGA1-204ENST00000506275 LMOD2Q6P5Q4 547 aa3.44□□□□□ -1.86
ITGA1-204ENST00000506275 PLCB2Q00722 1185 aa3.43□□□□□ -1.86
ITGA1-204ENST00000506275 ANO8Q9HCE9 1232 aaPredicted RBP3.43□□□□□ -1.86
ITGA1-204ENST00000506275 RGL3Q3MIN7 710 aa3.43□□□□□ -1.86
ITGA1-204ENST00000506275 ARID3AQ99856 593 aa3.43□□□□□ -1.86
ITGA1-204ENST00000506275 SOX12O15370 315 aa3.43□□□□□ -1.86
ITGA1-204ENST00000506275 TNNT2P45379 298 aaPredicted RBP3.42□□□□□ -1.86
ITGA1-204ENST00000506275 LAS1LQ9Y4W2 734 aaKnown RBP3.42□□□□□ -1.86
ITGA1-204ENST00000506275 CDK11BP21127 795 aaKnown RBP3.42□□□□□ -1.86
ITGA1-204ENST00000506275 MRS2Q9HD23 443 aa3.41□□□□□ -1.86
ITGA1-204ENST00000506275 HAP1P54257 671 aaPredicted RBP3.41□□□□□ -1.86
ITGA1-204ENST00000506275 DNTTIP2Q5QJE6 756 aaKnown RBP3.41□□□□□ -1.86
ITGA1-204ENST00000506275 PIAS4Q8N2W9 510 aaPredicted RBP3.4□□□□□ -1.86
ITGA1-204ENST00000506275 SPRYD3Q8NCJ5 442 aa3.4□□□□□ -1.86
ITGA1-204ENST00000506275 MIER1Q8N108 512 aa3.4□□□□□ -1.86
ITGA1-204ENST00000506275 KCNH8Q96L42 1107 aa3.4□□□□□ -1.86
ITGA1-204ENST00000506275 WDR43Q15061 677 aaKnown RBP eCLIP3.4□□□□□ -1.87
ITGA1-204ENST00000506275 NAP1L2Q9ULW6 460 aaPredicted RBP3.4□□□□□ -1.87
ITGA1-204ENST00000506275 NPHP1O15259 732 aa3.4□□□□□ -1.87
ITGA1-204ENST00000506275 ERICH6BQ5W0A0 696 aa3.39□□□□□ -1.87
ITGA1-204ENST00000506275 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.39□□□□□ -1.87
ITGA1-204ENST00000506275 ABCC9O60706 1549 aa3.39□□□□□ -1.87
ITGA1-204ENST00000506275 TONSLQ96HA7 1378 aa3.39□□□□□ -1.87
ITGA1-204ENST00000506275 RGS3P49796 1198 aa3.39□□□□□ -1.87
ITGA1-204ENST00000506275 PDE4CQ08493 712 aa3.39□□□□□ -1.87
ITGA1-204ENST00000506275 KAT6BQ8WYB5 2073 aa3.38□□□□□ -1.87
ITGA1-204ENST00000506275 TRIM44Q96DX7 344 aaPredicted RBP3.38□□□□□ -1.87
ITGA1-204ENST00000506275 RRP7BPQ9NSQ0 103 aa3.38□□□□□ -1.87
ITGA1-204ENST00000506275 GON4LQ3T8J9 2241 aa3.38□□□□□ -1.87
ITGA1-204ENST00000506275 CLSTN1O94985 981 aa3.38□□□□□ -1.87
ITGA1-204ENST00000506275 PTMAP06454 111 aaKnown RBP3.38□□□□□ -1.87
ITGA1-204ENST00000506275 SUPT16HQ9Y5B9 1047 aaKnown RBP3.38□□□□□ -1.87
ITGA1-204ENST00000506275 GLIPR1L2Q4G1C9 344 aa3.38□□□□□ -1.87
ITGA1-204ENST00000506275 ISY1Q9ULR0 285 aaKnown RBP3.37□□□□□ -1.87
ITGA1-204ENST00000506275 FRAT1Q92837 279 aaPredicted RBP3.37□□□□□ -1.87
ITGA1-204ENST00000506275 APBB1O00213 710 aa3.37□□□□□ -1.87
ITGA1-204ENST00000506275 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.37□□□□□ -1.87
ITGA1-204ENST00000506275 NPM1P06748 294 aaKnown RBP eCLIP3.37□□□□□ -1.87
ITGA1-204ENST00000506275 SAFB2Q14151 953 aaKnown RBP eCLIP3.37□□□□□ -1.87
ITGA1-204ENST00000506275 FBXO3Q9UK99 471 aa3.37□□□□□ -1.87
ITGA1-204ENST00000506275 NAP1L5Q96NT1 182 aaPredicted RBP3.36□□□□□ -1.87
ITGA1-204ENST00000506275 MYH16Q9H6N6 1097 aa3.36□□□□□ -1.87
ITGA1-204ENST00000506275 PPP1R15AO75807 674 aaPredicted RBP3.36□□□□□ -1.87
ITGA1-204ENST00000506275 B4GALNT3Q6L9W6 998 aa3.36□□□□□ -1.87
ITGA1-204ENST00000506275 ZNF330Q9Y3S2 320 aaPredicted RBP3.36□□□□□ -1.87
ITGA1-204ENST00000506275 MLECQ14165 292 aa3.35□□□□□ -1.87
ITGA1-204ENST00000506275 FGD1P98174 961 aa3.35□□□□□ -1.87
ITGA1-204ENST00000506275 ZRSR1Q15695 479 aaKnown RBP3.35□□□□□ -1.87
ITGA1-204ENST00000506275 WWC1Q8IX03 1113 aa3.34□□□□□ -1.87
ITGA1-204ENST00000506275 CC2D1BQ5T0F9 858 aaKnown RBP3.34□□□□□ -1.87
ITGA1-204ENST00000506275 CSRNP3Q8WYN3 585 aa3.34□□□□□ -1.87
ITGA1-204ENST00000506275 U2SURPO15042 1029 aaKnown RBP3.34□□□□□ -1.87
ITGA1-204ENST00000506275 FTSJ3Q8IY81 847 aaKnown RBP3.34□□□□□ -1.87
ITGA1-204ENST00000506275 GZF1Q9H116 711 aaPredicted RBP3.34□□□□□ -1.87
ITGA1-204ENST00000506275 KCNJ4P48050 445 aa3.34□□□□□ -1.88
ITGA1-204ENST00000506275 TSPY4P0CV99 314 aa3.33□□□□□ -1.88
ITGA1-204ENST00000506275 TSPY10P0CW01 314 aa3.33□□□□□ -1.88
ITGA1-204ENST00000506275 OS9Q13438 667 aaPredicted RBP3.33□□□□□ -1.88
ITGA1-204ENST00000506275 PRM3Q9NNZ6 103 aa3.33□□□□□ -1.88
ITGA1-204ENST00000506275 TRHP20396 242 aaPredicted RBP3.32□□□□□ -1.88
ITGA1-204ENST00000506275 GOLGA2Q08379 1002 aa3.32□□□□□ -1.88
ITGA1-204ENST00000506275 PPP6R1Q9UPN7 881 aa3.32□□□□□ -1.88
ITGA1-204ENST00000506275 NUTM2FA1L443 756 aa3.32□□□□□ -1.88
ITGA1-204ENST00000506275 CREBRFQ8IUR6 639 aa3.31□□□□□ -1.88
ITGA1-204ENST00000506275 SIN3AQ96ST3 1273 aa3.31□□□□□ -1.88
ITGA1-204ENST00000506275 CCDC9Q9Y3X0 531 aaKnown RBP3.31□□□□□ -1.88
ITGA1-204ENST00000506275 GOLGA6L22H0YM25 854 aa3.31□□□□□ -1.88
ITGA1-204ENST00000506275 BECN1Q14457 450 aa3.31□□□□□ -1.88
ITGA1-204ENST00000506275 FOXD4L6Q3SYB3 417 aaPredicted RBP3.31□□□□□ -1.88
ITGA1-204ENST00000506275 FOXD4L3Q6VB84 417 aaPredicted RBP3.31□□□□□ -1.88
ITGA1-204ENST00000506275 STK26Q9P289 416 aa3.31□□□□□ -1.88
ITGA1-204ENST00000506275 HSP90AB1P08238 724 aaKnown RBP3.31□□□□□ -1.88
ITGA1-204ENST00000506275 EIF4G2P78344 907 aaKnown RBP eCLIP3.31□□□□□ -1.88
ITGA1-204ENST00000506275 BCL11BQ9C0K0 894 aaPredicted RBP3.31□□□□□ -1.88
ITGA1-204ENST00000506275 NOL8Q76FK4 1167 aaKnown RBP3.3□□□□□ -1.88
ITGA1-204ENST00000506275 DRC7Q8IY82 874 aa3.3□□□□□ -1.88
ITGA1-204ENST00000506275 SLKQ9H2G2 1235 aaPredicted RBP3.3□□□□□ -1.88
ITGA1-204ENST00000506275 FOXD4L1Q9NU39 408 aa3.3□□□□□ -1.88
ITGA1-204ENST00000506275 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.3□□□□□ -1.88
ITGA1-204ENST00000506275 PAK3O75914 559 aaPredicted RBP3.3□□□□□ -1.88
ITGA1-204ENST00000506275 FOXD4L5Q5VV16 416 aaPredicted RBP3.3□□□□□ -1.88
ITGA1-204ENST00000506275 CHMP7Q8WUX9 453 aaPredicted RBP3.3□□□□□ -1.88
ITGA1-204ENST00000506275 FOXD4L4Q8WXT5 416 aaPredicted RBP3.3□□□□□ -1.88
ITGA1-204ENST00000506275 POGKQ9P215 609 aa3.3□□□□□ -1.88
ITGA1-204ENST00000506275 KNSTRNQ9Y448 316 aa3.3□□□□□ -1.88
ITGA1-204ENST00000506275 GOLGA6L4A6NEF3 574 aa3.29□□□□□ -1.88
ITGA1-204ENST00000506275 FOXD1Q16676 465 aa3.29□□□□□ -1.88
ITGA1-204ENST00000506275 CARD11Q9BXL7 1154 aa3.29□□□□□ -1.88
ITGA1-204ENST00000506275 NUTM2DQ5VT03 806 aaPredicted RBP3.29□□□□□ -1.88
ITGA1-204ENST00000506275 MTUS2Q5JR59 1369 aa3.29□□□□□ -1.88
ITGA1-204ENST00000506275 CHMP3Q9Y3E7 222 aa3.28□□□□□ -1.88
ITGA1-204ENST00000506275 MAPK8IP3Q9UPT6 1336 aa3.28□□□□□ -1.88
ITGA1-204ENST00000506275 SRPK2P78362 688 aaKnown RBP3.27□□□□□ -1.89
ITGA1-204ENST00000506275 CASC1Q6TDU7 716 aa3.27□□□□□ -1.89
ITGA1-204ENST00000506275 CLUAP1Q96AJ1 413 aa3.27□□□□□ -1.89
ITGA1-204ENST00000506275 GNL2Q13823 731 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms