RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 SMARCA2P51531 1590 aa8.49□□□□□ -1.05
SOX2-OT-218ENST00000498731 TMEM132AQ24JP5 1023 aa8.48□□□□□ -1.05
SOX2-OT-218ENST00000498731 PPP6R1Q9UPN7 881 aa8.48□□□□□ -1.05
SOX2-OT-218ENST00000498731 RBM19Q9Y4C8 960 aaKnown RBP8.48□□□□□ -1.05
SOX2-OT-218ENST00000498731 ZNF316A6NFI3 1004 aaPredicted RBP8.47□□□□□ -1.05
SOX2-OT-218ENST00000498731 FBLN2P98095 1184 aa8.46□□□□□ -1.05
SOX2-OT-218ENST00000498731 SOGA1O94964 1423 aa8.45□□□□□ -1.06
SOX2-OT-218ENST00000498731 ITGAEP38570 1179 aa8.44□□□□□ -1.06
SOX2-OT-218ENST00000498731 WRNQ14191 1432 aaPredicted RBP eCLIP8.42□□□□□ -1.06
SOX2-OT-218ENST00000498731 DEKP35659 375 aaKnown RBP8.41□□□□□ -1.06
SOX2-OT-218ENST00000498731 KCNH8Q96L42 1107 aa8.41□□□□□ -1.06
SOX2-OT-218ENST00000498731 RUSC2Q8N2Y8 1516 aa8.4□□□□□ -1.06
SOX2-OT-218ENST00000498731 CADPSQ9ULU8 1353 aa8.4□□□□□ -1.06
SOX2-OT-218ENST00000498731 FKBP8Q14318 412 aa8.4□□□□□ -1.07
SOX2-OT-218ENST00000498731 IL27Q8NEV9 243 aa8.39□□□□□ -1.07
SOX2-OT-218ENST00000498731 UBE2Q2Q8WVN8 375 aa8.39□□□□□ -1.07
SOX2-OT-218ENST00000498731 PDS5BQ9NTI5 1447 aa8.39□□□□□ -1.07
SOX2-OT-218ENST00000498731 ATP1B4Q9UN42 357 aaPredicted RBP8.39□□□□□ -1.07
SOX2-OT-218ENST00000498731 HMGXB3Q12766 1538 aa8.35□□□□□ -1.07
SOX2-OT-218ENST00000498731 DNAJC5Q9H3Z4 198 aa8.33□□□□□ -1.08
SOX2-OT-218ENST00000498731 NPM3O75607 178 aaKnown RBP8.32□□□□□ -1.08
SOX2-OT-218ENST00000498731 FANCD2Q9BXW9 1451 aa8.31□□□□□ -1.08
SOX2-OT-218ENST00000498731 P3H3Q8IVL6 736 aa8.31□□□□□ -1.08
SOX2-OT-218ENST00000498731 HNRNPUL2Q1KMD3 747 aaKnown RBP8.31□□□□□ -1.08
SOX2-OT-218ENST00000498731 CEP164Q9UPV0 1460 aa8.3□□□□□ -1.08
SOX2-OT-218ENST00000498731 NBR1Q14596 966 aa8.29□□□□□ -1.08
SOX2-OT-218ENST00000498731 CEP162Q5TB80 1403 aa8.29□□□□□ -1.08
SOX2-OT-218ENST00000498731 SYNJ1O43426 1573 aa8.27□□□□□ -1.09
SOX2-OT-218ENST00000498731 PEG3Q9GZU2 1588 aa8.26□□□□□ -1.09
SOX2-OT-218ENST00000498731 PPP4R3CPQ6ZMV5 832 aa8.26□□□□□ -1.09
SOX2-OT-218ENST00000498731 KIF21AQ7Z4S6 1674 aa8.25□□□□□ -1.09
SOX2-OT-218ENST00000498731 LAMC3Q9Y6N6 1575 aa8.25□□□□□ -1.09
SOX2-OT-218ENST00000498731 PKNOX2Q96KN3 472 aa8.24□□□□□ -1.09
SOX2-OT-218ENST00000498731 GOLGA3Q08378 1498 aa8.24□□□□□ -1.09
SOX2-OT-218ENST00000498731 CHMP4AQ9BY43 222 aa8.24□□□□□ -1.09
SOX2-OT-218ENST00000498731 TDRD9Q8NDG6 1382 aaKnown RBP8.24□□□□□ -1.09
SOX2-OT-218ENST00000498731 OSCARQ8IYS5 282 aa8.23□□□□□ -1.09
SOX2-OT-218ENST00000498731 TNIKQ9UKE5 1360 aa8.23□□□□□ -1.09
SOX2-OT-218ENST00000498731 EEA1Q15075 1411 aa8.23□□□□□ -1.09
SOX2-OT-218ENST00000498731 MRC2Q9UBG0 1479 aa8.23□□□□□ -1.09
SOX2-OT-218ENST00000498731 PAK3O75914 559 aaPredicted RBP8.23□□□□□ -1.09
SOX2-OT-218ENST00000498731 DHX37Q8IY37 1157 aaKnown RBP8.22□□□□□ -1.09
SOX2-OT-218ENST00000498731 CUX2O14529 1486 aa8.22□□□□□ -1.09
SOX2-OT-218ENST00000498731 CFTRP13569 1480 aa8.22□□□□□ -1.09
SOX2-OT-218ENST00000498731 CHMP7Q8WUX9 453 aaPredicted RBP8.22□□□□□ -1.09
SOX2-OT-218ENST00000498731 CLIP1P30622 1438 aa8.22□□□□□ -1.09
SOX2-OT-218ENST00000498731 IGSF3O75054 1194 aa8.22□□□□□ -1.09
SOX2-OT-218ENST00000498731 CYB5RLQ6IPT4 315 aa8.22□□□□□ -1.09
SOX2-OT-218ENST00000498731 RAPGEF2Q9Y4G8 1499 aa8.21□□□□□ -1.09
SOX2-OT-218ENST00000498731 KIF27Q86VH2 1401 aa8.2□□□□□ -1.1
SOX2-OT-218ENST00000498731 IRX6P78412 446 aaPredicted RBP8.2□□□□□ -1.1
SOX2-OT-218ENST00000498731 SAMD1Q6SPF0 538 aaPredicted RBP8.2□□□□□ -1.1
SOX2-OT-218ENST00000498731 ARID3CA6NKF2 412 aa8.19□□□□□ -1.1
SOX2-OT-218ENST00000498731 AQRO60306 1485 aaKnown RBP eCLIP8.19□□□□□ -1.1
SOX2-OT-218ENST00000498731 TRHP20396 242 aaPredicted RBP8.19□□□□□ -1.1
SOX2-OT-218ENST00000498731 PDIA4P13667 645 aaKnown RBP8.18□□□□□ -1.1
SOX2-OT-218ENST00000498731 VSIG10Q8N0Z9 540 aa8.18□□□□□ -1.1
SOX2-OT-218ENST00000498731 URB2Q14146 1524 aaKnown RBP8.17□□□□□ -1.1
SOX2-OT-218ENST00000498731 CUX1P39880 1505 aa8.17□□□□□ -1.1
SOX2-OT-218ENST00000498731 RAD54L2Q9Y4B4 1467 aa8.17□□□□□ -1.1
SOX2-OT-218ENST00000498731 ZNF608Q9ULD9 1512 aaPredicted RBP8.17□□□□□ -1.1
SOX2-OT-218ENST00000498731 CLSPNQ9HAW4 1339 aa8.16□□□□□ -1.1
SOX2-OT-218ENST00000498731 FANCIQ9NVI1 1328 aa8.16□□□□□ -1.1
SOX2-OT-218ENST00000498731 FBXO3Q9UK99 471 aa8.16□□□□□ -1.1
SOX2-OT-218ENST00000498731 THOC2Q8NI27 1593 aaKnown RBP8.14□□□□□ -1.11
SOX2-OT-218ENST00000498731 FGD5Q6ZNL6 1462 aa8.14□□□□□ -1.11
SOX2-OT-218ENST00000498731 CARMIL1Q5VZK9 1371 aa8.14□□□□□ -1.11
SOX2-OT-218ENST00000498731 CFAP44Q96MT7 982 aa8.14□□□□□ -1.11
SOX2-OT-218ENST00000498731 TRIM52Q96A61 297 aa8.13□□□□□ -1.11
SOX2-OT-218ENST00000498731 TOP2BQ02880 1626 aa8.12□□□□□ -1.11
SOX2-OT-218ENST00000498731 FAM50AQ14320 339 aaKnown RBP8.11□□□□□ -1.11
SOX2-OT-218ENST00000498731 TOPBP1Q92547 1522 aa8.11□□□□□ -1.11
SOX2-OT-218ENST00000498731 KANK4Q5T7N3 995 aaPredicted RBP8.11□□□□□ -1.11
SOX2-OT-218ENST00000498731 ERICH6BQ5W0A0 696 aa8.11□□□□□ -1.11
SOX2-OT-218ENST00000498731 IGF1RP08069 1367 aa8.1□□□□□ -1.11
SOX2-OT-218ENST00000498731 BRPF3Q9ULD4 1205 aa8.09□□□□□ -1.11
SOX2-OT-218ENST00000498731 WDR62O43379 1518 aa8.08□□□□□ -1.12
SOX2-OT-218ENST00000498731 C11orf95C9JLR9 678 aaPredicted RBP8.08□□□□□ -1.12
SOX2-OT-218ENST00000498731 POLA1P09884 1462 aaPredicted RBP8.07□□□□□ -1.12
SOX2-OT-218ENST00000498731 VPS8Q8N3P4 1428 aa8.07□□□□□ -1.12
SOX2-OT-218ENST00000498731 ZMYND15Q9H091 742 aa8.06□□□□□ -1.12
SOX2-OT-218ENST00000498731 PIAS4Q8N2W9 510 aaPredicted RBP8.05□□□□□ -1.12
SOX2-OT-218ENST00000498731 IFT140Q96RY7 1462 aa8.05□□□□□ -1.12
SOX2-OT-218ENST00000498731 POTEDQ86YR6 584 aa8.05□□□□□ -1.12
SOX2-OT-218ENST00000498731 NOP58Q9Y2X3 529 aaKnown RBP8.04□□□□□ -1.12
SOX2-OT-218ENST00000498731 PRXQ9BXM0 1461 aa8.04□□□□□ -1.12
SOX2-OT-218ENST00000498731 KIF21BO75037 1637 aa8.03□□□□□ -1.12
SOX2-OT-218ENST00000498731 BIVM-ERCC5R4GMW8 1640 aa8.02□□□□□ -1.13
SOX2-OT-218ENST00000498731 A0A0U1RQG5 324 aaPredicted RBP8.02□□□□□ -1.13
SOX2-OT-218ENST00000498731 FOXD4L1Q9NU39 408 aa8.01□□□□□ -1.13
SOX2-OT-218ENST00000498731 FHOD3Q2V2M9 1422 aa8.01□□□□□ -1.13
SOX2-OT-218ENST00000498731 DNMBPQ6XZF7 1577 aa8.01□□□□□ -1.13
SOX2-OT-218ENST00000498731 SNAPC4Q5SXM2 1469 aa8□□□□□ -1.13
SOX2-OT-218ENST00000498731 ARAP1Q96P48 1450 aa8□□□□□ -1.13
SOX2-OT-218ENST00000498731 CDK11AQ9UQ88 783 aaPredicted RBP8□□□□□ -1.13
SOX2-OT-218ENST00000498731 NEFLP07196 543 aa8□□□□□ -1.13
SOX2-OT-218ENST00000498731 GAPVD1Q14C86 1478 aa7.99□□□□□ -1.13
SOX2-OT-218ENST00000498731 HIRIP3Q9BW71 556 aaPredicted RBP7.99□□□□□ -1.13
SOX2-OT-218ENST00000498731 B4GALNT3Q6L9W6 998 aa7.98□□□□□ -1.13
SOX2-OT-218ENST00000498731 MYT1LQ9UL68 1186 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms